mRNA_F-serratus_M_contig10.79.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig10.79.1
Unique NamemRNA_F-serratus_M_contig10.79.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: D8LCD0_ECTSI (RBR-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCD0_ECTSI)

HSP 1 Score: 788 bits (2036), Expect = 1.810e-277
Identity = 374/451 (82.93%), Postives = 411/451 (91.13%), Query Frame = 2
Query:  434 DVDVSLSDDSSVAFINQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVGLGLSGGQKASRPGEDEALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDATERRMVELQETSAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKELFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGL 1786
            +VD++L DD++VAFI+Q QLK LM+KVV+DISETVN+S +AATALLRHFSWNRERLFDQYY++PE+VMEKVG+  +GG K     + E L CRICC+ +  +E++ALAC HFFC+GCW AYL AKV EGPT VY TCPEHKCPQI SE+ F EF S EDLKRYQ FSLTSFVDINK LRFCPGKDCGMVVKAPLSY RSVRCNCGSVFCFRCGEEAHDPA+C EL +WKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHM+CRQCK EFCWICMGDW+EHGS++GGYYKCNKYEAKEG+GD DVAKAKAELDRYLHYYKRYQAH SSQQIAEKQ DATERRMVELQE+SAGSAWIDVQFL+TAMEQLIECRRVLKYTYVMSYYIEEKTPAKELFEHHQENLEKYTE LHELSESPL+ I+RTNVINYTRCTDRFCKS+LQSV++GL
Sbjct:   65 EVDLALRDDTAVAFIDQAQLKVLMSKVVSDISETVNISAEAATALLRHFSWNRERLFDQYYTSPESVMEKVGIA-AGGHKTGSLKDGEKLECRICCEEFTAKEAYALACKHFFCRGCWAAYLGAKVQEGPTSVYTTCPEHKCPQIASESTFSEFLSAEDLKRYQAFSLTSFVDINKMLRFCPGKDCGMVVKAPLSYPRSVRCNCGSVFCFRCGEEAHDPASCEELAMWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMSCRQCKAEFCWICMGDWSEHGSSSGGYYKCNKYEAKEGDGDNDVAKAKAELDRYLHYYKRYQAHDSSQQIAEKQQDATERRMVELQESSAGSAWIDVQFLKTAMEQLIECRRVLKYTYVMSYYIEEKTPAKELFEHHQENLEKYTERLHELSESPLEKIERTNVINYTRCTDRFCKSLLQSVQDGL 514          
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: A0A6S9ISQ1_HETAK (RBR-type E3 ubiquitin transferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ISQ1_HETAK)

HSP 1 Score: 583 bits (1504), Expect = 2.810e-197
Identity = 283/454 (62.33%), Postives = 340/454 (74.89%), Query Frame = 2
Query:  458 DSSVAFINQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVGLGLSGGQK---ASRPGEDE------ALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDATERRMVELQETSAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKELFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGLGD 1792
            D  +  I+ ++L+ALM +VV +IS  + +   AATALLR FSWN+E+LFD+YYS PE+V  KVG  LS   +   +S PG         +LLCRICCD   G  +FAL C+HFFC+ CW  YL  KV EGP CVY  CPE KCP+IV+E +F+EF S E   +YQ FSL SFVDIN+TLR+CPG  C    +AP   A  V+C CG+ FCFRC +EAH PA C +L  WKEKCQNESETANWILANTK+CPKC TRIEKNQGCNHMTCRQCK EFCWICMG W++HG+ TGGYYKCN+YE K    D DVA+A+AELD+YLHYY+RY  HH++QQ AEKQ  ATERRMVELQE SAGS WIDVQFL++A +QLIECRR LKYTYV  YY+ + +P K LFE HQENLEK+TEHL  LSE P D ++RT VINYTR T +F  ++L+SV+EG+GD
Sbjct:   46 DEDIRIIDTKELRALMDEVVGEISGVMALPPSAATALLRFFSWNKEKLFDKYYSDPESVTSKVG-DLSAAARMGQSSGPGXXXXXXXXXSLLCRICCDEIDGATAFALGCAHFFCRVCWAQYLDVKVAEGPACVYTVCPEQKCPRIVTEEIFQEFLSAETFLKYQQFSLDSFVDINRTLRWCPGAGCPRAARAP-PQAGHVKCVCGAAFCFRCADEAHAPAGCKDLQTWKEKCQNESETANWILANTKRCPKCSTRIEKNQGCNHMTCRQCKEEFCWICMGPWSDHGANTGGYYKCNRYEGKAPAEDNDVARAQAELDKYLHYYQRYHNHHAAQQYAEKQQAATERRMVELQEASAGSTWIDVQFLKSATDQLIECRRALKYTYVYGYYLPDSSPHKTLFEDHQENLEKFTEHLSGLSELPFDKMERTEVINYTRVTGKFLSTILKSVQEGVGD 497          
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: A0A836CMB7_9STRA (RBR-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB7_9STRA)

HSP 1 Score: 560 bits (1444), Expect = 1.260e-187
Identity = 278/470 (59.15%), Postives = 338/470 (71.91%), Query Frame = 2
Query:  452 SDDSSVAFINQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVG-----LGLSGGQKASRPGED-------EALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDA-TERRMVELQETSA---GSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKE--LFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGLGDMLESS 1807
            SDD  V  +++  LK LM  VVA+IS+ +N+ EDAATALLR FSWN E+L+DQ+Y+ PE++  KVG     LG+S      R            ALLCRICC++    E  AL C HFFC+ CW  YL   + +GP CVY TCPEHKCPQIV E VF+   + E+L RYQ +SL SFVDINK LRFCPG  C  + +AP S  R V+C CG  FCF+CG+EAH+P  C  L LW+EKC NESETANWILANTK CPKC TRIEKNQGCNHMTCRQCK EFCWICMG WT+HG+ TGG+YKCN+Y ++  EG +DVA+AKAEL+RYLHYYKRYQ H   Q+ A+KQ +  TE RM++L E      G+ WIDVQFLR A EQLIECRR LKYTYV  YY+ ++   ++  LFEHHQENLEK+TEHL ELSE  LD +DR  VINYTR TD+F +S++QSV++GL ++ E S
Sbjct:   70 SDD--VTILSEGDLKVLMHSVVAEISQVMNIPEDAATALLRFFSWNVEKLYDQFYANPESITAKVGITNADLGVSHAAAPVRTASGGSGKAAGAALLCRICCENVPDAE--ALPCGHFFCEECWRGYLCNAIQQGPACVYTTCPEHKCPQIVPEDVFRAHVTPEELARYQEYSLRSFVDINKRLRFCPGPGCACIAQAPRSCPR-VKCTCGECFCFKCGDEAHEPVGCESLALWREKCSNESETANWILANTKMCPKCNTRIEKNQGCNHMTCRQCKYEFCWICMGAWTDHGTNTGGFYKCNRYASEATEGMSDVARAKAELERYLHYYKRYQGHQEGQKFAQKQMETRTEARMLQLLEQEGQEPGAGWIDVQFLRAATEQLIECRRALKYTYVFGYYMTDQAQKRQKVLFEHHQENLEKFTEHLSELSEKALDTMDRAEVINYTRVTDKFLRSLMQSVRDGLCEVEEDS 534          
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: A0A835Z7M6_9STRA (RBR-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M6_9STRA)

HSP 1 Score: 516 bits (1330), Expect = 1.470e-171
Identity = 260/469 (55.44%), Postives = 320/469 (68.23%), Query Frame = 2
Query:  476 INQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVGLGLSGGQKASRPG---------------------------EDEALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDA-TERRMVELQET--SAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKE--LFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGL 1786
            +++  ++ALM  VV D +  V+V   AA ALLR F WN+E L+D++Y+ P++V  KVG+G   G+  SR G                               L CRICCD  +  ++ AL C+HFFC+ CW  +L   +  GP CVY TCPEHKCPQIV+E VF+   S ++L RY+ F+L SFVD N+ LRFCPG  C  V +AP S  R V+C CG  FCF+CG+EAH+P  C EL  W+EKC NESETANW+LANTK CPKC TRIEKNQGCNHMTCRQCK EFCWICMG W EHG+ TGGYYKCNK+  K  EG +D A+AKAEL+RYLH+YKR+Q H   Q  AE Q ++ TE RM+EL E   S  S WIDVQFLRTA+EQLIECRR LKYTYV  YY+ +    ++  LFE+HQENLEK+TE L ELSE PL+ IDR  VINYTR TD+F +S+ Q V++GL
Sbjct:    3 LSESDVRALMDAVVDDTAAVVSVPRGAAAALLRFFRWNQESLYDRFYADPDSVTAKVGIG-GAGKGMSRIGGAXXXXXXXXXXXXXXXXXXXXXXXXXXGALLRCRICCDDVE--DALALPCAHFFCEECWGGFLRNALASGPPCVYTTCPEHKCPQIVTEDVFRAHLSAQELARYRDFALRSFVDTNRRLRFCPGPGCARVARAPRSCTR-VKCPCGECFCFKCGDEAHEPVACAELRRWREKCSNESETANWLLANTKMCPKCDTRIEKNQGCNHMTCRQCKYEFCWICMGIWAEHGTNTGGYYKCNKFVDKSMEGMSDAARAKAELERYLHFYKRFQGHALGQAFAETQMESRTEARMLELLENQESGSSGWIDVQFLRTAVEQLIECRRALKYTYVYGYYLTDPAQKRQRDLFENHQENLEKFTERLSELSEKPLETIDRAEVINYTRVTDKFLRSLTQCVRDGL 467          
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: A0A7R9UDV8_9STRA (RBR-type E3 ubiquitin transferase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDV8_9STRA)

HSP 1 Score: 486 bits (1250), Expect = 3.010e-159
Identity = 227/446 (50.90%), Postives = 314/446 (70.40%), Query Frame = 2
Query:  470 AFINQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVGLGLSGGQKASRPGEDEALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVA-KAKAELDRYLHYYKRYQAHHSSQQIAEKQSDATERRMVELQETSAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKELFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGL-GDMLE 1801
            + I   +L+ LM++++A+I   + +S++ A  L+  F W+RE+L+++YY     + E++G+          P   +++ CRIC +     E+  LAC H FC  C+  YL+ K+ +GP  VYA CPE KC  +V EA+F+   + ++L++Y+ + L+SFVDI+K +R+CP  +C    +      + V C+CG  FCF+CGE+AH PA+C  L LW+EKCQNESETANWI+ANTK+CP+C+TRIEKNQGCNHMTC +CK EFCWICMG W++HG+ TGGYYKCN+++A     D   + +AK ELDRYLHYY+RY  HHS +  A+ Q D  ++RM ELQETSA S WIDVQ+L+ A EQLIECRRVLKYTYV  YY+ + T  KELFEHHQ+NLEK+TEHL  L+E     IDRT V+NYTR T+R+ +++L+++ EGL GDM E
Sbjct:   63 SIIATSELRCLMSEMLAEICPVLEISQEGAYHLMSKFGWDREKLYNKYYEGTSDLKEELGISDLSIPPVEGP---DSITCRICYEEVPPSEAVQLACKHAFCVDCYGGYLNNKIGDGPAAVYARCPEAKCNCLVPEALFQRLLTPDNLRKYERYLLSSFVDISKNMRWCPAPNCDKAARGD-GAVKDVSCDCGRWFCFKCGEDAHSPASCDHLALWQEKCQNESETANWIIANTKKCPQCQTRIEKNQGCNHMTCSRCKHEFCWICMGSWSDHGTATGGYYKCNRFDANNASVDQKESDRAKRELDRYLHYYQRYHGHHSGENFAKTQQDHLDQRMAELQETSAASTWIDVQYLKIAQEQLIECRRVLKYTYVYGYYMRDGTSEKELFEHHQQNLEKFTEHLSGLTEKKPQDIDRTEVVNYTRVTNRYLRNLLKAIDEGLDGDMDE 504          
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: K3WFE7_GLOUD (RBR-type E3 ubiquitin transferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFE7_GLOUD)

HSP 1 Score: 486 bits (1250), Expect = 9.720e-159
Identity = 227/439 (51.71%), Postives = 301/439 (68.56%), Query Frame = 2
Query:  476 INQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVGLGLSGGQKASRPGEDEALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDATERRMVELQETSAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKE--LFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGL 1786
            I++++L      ++ +I++ + +S   A  +LRHF WN+E+L++ YYS P    E  G+  +  + A +  + + + C ICCD Y   E F + C H +C  CW  YLS K+ EGP CV  +CP H C +IVS+ +FK+F + +D  +Y  + L S+VDINK +++CP   C   + +    + SV C+CG VFC RCGEEAH P TC +L  W+EKC+NESETANWILANTK+CPKC  RIEKNQGCNHMTCR C  EFCWICM  W +HGS TGGYYKCN+Y+ +   GD+D A+AKAELDRYLHYY+R+  H  + + A++  D TE RM+ELQ +   S+WIDVQFL  A EQLIECRRVLKYTYV  YY+    P KE  LFE+ QENLEK  EHL  LSE+PLD ++R+ +INYTR TD F +++L  V++GL
Sbjct:  100 IDEQELFLEQRGLIHEIAQVLEISPSVAAIMLRHFGWNKEKLYEVYYSDPAKAQEDAGVACAS-KSAPKLLDGQMVDCMICCDSYPANEVFGMGCGHLYCVNCWKPYLSLKIGEGPLCVTTSCPAHGCKEIVSDEIFKKFTTPDDFIKYSRYVLRSYVDINKCVKWCPSPGCNKAISSAGGLS-SVSCSCGCVFCLRCGEEAHSPVTCEQLASWQEKCKNESETANWILANTKKCPKCSVRIEKNQGCNHMTCRSCTYEFCWICMESWAKHGSGTGGYYKCNRYDGEAATGDSDAARAKAELDRYLHYYQRFANHSEAGKFAQRMRDGTESRMIELQASHGESSWIDVQFLNAATEQLIECRRVLKYTYVFGYYL---PPGKEKNLFEYLQENLEKNAEHLTGLSEAPLDKMNRSEIINYTRVTDTFLRNLLAGVEDGL 533          
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: H3GR83_PHYRM (RBR-type E3 ubiquitin transferase n=22 Tax=Phytophthora TaxID=4783 RepID=H3GR83_PHYRM)

HSP 1 Score: 484 bits (1247), Expect = 1.400e-158
Identity = 228/439 (51.94%), Postives = 298/439 (67.88%), Query Frame = 2
Query:  476 INQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVGLGLSGGQKASRPGEDEALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDATERRMVELQETSAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKE--LFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGL 1786
            I++ +L      ++++I++ + +S   A+ LLRHF WN+E+LF+ YY+ P     + G+  +  Q    P +   + C ICCD Y   E F + C H +C  CW  YLS K+ EGP CV  TCP H C ++VS+ +FK+  + ED ++Y  + L SFVDINK +++CP   C   + +    + SV C CG VFC RCGEEAH P TC +L+ W+EKC+NESETANWILANTK+CPKC  RIEKNQGCNHMTCR C  EFCWICM  W +HGS TGGYYKCN+Y+A    GDTD A+AKAELDRYLHYY+R+  H  + + A++  + TE RM+ELQ +   S+WIDVQFL  A EQLIECRRVLKYTY   YY+    P KE  LFE+ QENLEK  EHL  LSE PLD ++R+ +INYTR T+ F +++L  V++GL
Sbjct:   79 IDEAELLQEQRALISEIAQVLEISSPVASVLLRHFGWNKEKLFEGYYADPVKTQHEAGVEFADKQAPVIP-DGTKVDCNICCDEYPAHEVFGMGCGHVYCLNCWKPYLSLKIQEGPICVTTTCPAHGCKEVVSDIIFKKIVNPEDYRKYARYLLRSFVDINKGVKWCPSPGCSKAITSAGGLS-SVTCTCGCVFCLRCGEEAHSPVTCEQLSAWQEKCRNESETANWILANTKKCPKCSVRIEKNQGCNHMTCRSCNYEFCWICMEGWDKHGSGTGGYYKCNRYDADGEAGDTDAARAKAELDRYLHYYQRFANHSEAGKFAQRMREGTETRMIELQASHGDSSWIDVQFLNAATEQLIECRRVLKYTYAFGYYL---PPGKEKNLFEYLQENLEKNAEHLTGLSEMPLDKMNRSEIINYTRVTETFLRNLLTGVEDGL 512          
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: A0A0P1AN56_PLAHL (RBR-type E3 ubiquitin transferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN56_PLAHL)

HSP 1 Score: 484 bits (1245), Expect = 4.300e-158
Identity = 227/437 (51.95%), Postives = 296/437 (67.73%), Query Frame = 2
Query:  476 INQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVGLGLSGGQKASRPGEDEALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDATERRMVELQETSAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKELFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGL 1786
            I++E+L      ++++I++ + +S   A+ LLR+F WN+E+LF+ YY+ P       G+  +G      P +   + C ICCD Y   E F + C H +C  CW  YLS K+ EGP CV  TCP H C ++VS+ +FK   S ED ++Y  + L SFVDINK +++CP   C   + +    + SV C+CG VFC RCGEEAH P TC +L  W+EKC+NESETANWILANTK+CPKC  RIEKNQGCNHMTCR C  EFCWICM  W +HG+ TGGYYKCN+Y+A     DTD A+AKAELDRYLHYY+R+  H  + + A++  + TE RM+ELQ +   S+WIDVQFL TA EQLIECRRVLKYTYV  YY+      K LFE+ QENLEK  EHL  LSE PLD ++R+ +INYTR T+ F +++L  V++GL
Sbjct:   92 IDEEELLQEQQSLISEIAQVLEISASMASVLLRYFGWNKEKLFEGYYADPVKTKHDAGVEYAGSAAPVIP-KGAKVDCNICCDEYPANEIFGMGCGHLYCLHCWKPYLSLKIQEGPICVTTTCPAHGCQEVVSDVIFKNIVSSEDYRKYTRYVLRSFVDINKGVKWCPSPGCSKAITSAGGLS-SVTCSCGCVFCLRCGEEAHAPVTCEQLLAWQEKCRNESETANWILANTKKCPKCSVRIEKNQGCNHMTCRSCNYEFCWICMEGWAKHGTGTGGYYKCNRYDADAQTDDTDAARAKAELDRYLHYYQRFANHSEAGKFAQRMREGTENRMIELQASHGDSSWIDVQFLNTATEQLIECRRVLKYTYVFGYYLP-TGKEKNLFEYLQENLEKNAEHLTGLSEMPLDKMNRSEIINYTRVTETFLRNLLSGVEDGL 525          
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: A0A5D6YAY3_9STRA (RBR-type E3 ubiquitin transferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAY3_9STRA)

HSP 1 Score: 481 bits (1239), Expect = 7.980e-157
Identity = 233/440 (52.95%), Postives = 299/440 (67.95%), Query Frame = 2
Query:  476 INQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVGLGLSGGQKASRPGEDEALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDATERRMVELQETSAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPA---KELFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGL 1786
            I++E+L      +V +I++ + ++   A  LLRHF+WN+E+L++ YY+ P       G+  S    A+ P  D    C ICCD Y   E F + C H FC  CW  YLS KV EGP CV  TCP H C + V++A+FK+  S ED  RY  + L S+VDINK +++CP   C   + +    + +V C CG VFC RCGEE+H P TC +L  W+EKC+NESETANWILANTK+CPKC  RIEKNQGCNHMTC++C  EFCWICM  W +HGS TGGYYKCN+Y+  E  GDTD A+AKAELDRYLHYY+R+  H  + + A++  + TE RMVELQ +   S+WIDVQFL  A EQLIECRRVLKYTYV  YY+    PA   K LFE+ QENLEK  EHL  LSE+PLD ++R++VINYTR T+ F +++L  V++GL
Sbjct:  125 IDEEELFLEQRALVLEIAQVLEIAPAVAAVLLRHFAWNKEKLYEGYYADPAQAQADAGVAHSA---AAAPTVD----CMICCDSYPASEVFGMGCGHLFCLDCWKPYLSLKVGEGPLCVATTCPAHGCKEAVTDAIFKKLTSVEDFTRYSRYVLRSYVDINKCVKWCPSPGCNKAISSAGGLS-AVTCTCGCVFCLRCGEESHAPVTCEQLASWQEKCKNESETANWILANTKKCPKCAVRIEKNQGCNHMTCKKCTYEFCWICMESWAKHGSGTGGYYKCNRYDGGEAAGDTDAARAKAELDRYLHYYQRFANHSEAGKFAQRMREGTESRMVELQASHGDSSWIDVQFLNAATEQLIECRRVLKYTYVFGYYL----PAGKEKNLFEYLQENLEKNAEHLTGLSEAPLDKMNRSDVINYTRVTETFLRNLLTGVEDGL 552          
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Match: A0A8K1CFB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFB5_PYTOL)

HSP 1 Score: 476 bits (1224), Expect = 1.290e-154
Identity = 231/449 (51.45%), Postives = 305/449 (67.93%), Query Frame = 2
Query:  476 INQEQLKALMAKVVADISETVNVSEDAATALLRHFSWNRERLFDQYYSAPETVMEKVGLGLSGGQKASRPGEDEALLCRICCDHYKGRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAVFKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSVRCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCPKCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEAKEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDATERRMVELQETSAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKE--LFEHHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEGL---GDMLESS 1807
            I++++L     ++V D+++ + ++      LL  F WN+E+L++ Y++      +  G+  +  Q A    E + + CRIC D Y   E F + C H +C  CW +YLS K+ EGPTCV+ TCP   C ++VS+A+F++F + E+  RY  F L S+VDINK + +CP   C   + +    + SVRC CG +FC RCGEEAH P  C +L LW EKC+NESETANWILANTK+CPKC  RIEKNQGCNHMTCR+C  EFCWICM  W +HGS TGGYYKCN+YEA+    D+D A+AKAELDRYLHYY+RY  H  + + A++  + TE RM+ELQ ++  S+WIDVQFL  A E LIECRRVLKYTYV  YY+    P KE  LFE+ QENLEK TEHL  LSE+PLD +DR  V+NYTR T+ F +++L  V++GL   G ML+SS
Sbjct:  113 IDEKELFQEQRRLVNDVAQVLEITPSVTAILLGRFGWNKEKLYEGYWADALKARQDAGVEFAD-QPAPTFTEGQEIDCRICYDTYGPNEVFGMGCGHVYCLHCWKSYLSLKITEGPTCVHTTCPADGCKEVVSDAIFEKFLTPEEFSRYSRFVLRSYVDINKGVSWCPSPGCNNAISSAGGLS-SVRCTCGCLFCLRCGEEAHSPVNCEQLQLWMEKCRNESETANWILANTKKCPKCAVRIEKNQGCNHMTCRKCAHEFCWICMEAWDKHGSGTGGYYKCNRYEAQAALQDSDAARAKAELDRYLHYYQRYANHSEAAKFAQRMREGTEARMIELQASNGDSSWIDVQFLNAATELLIECRRVLKYTYVFGYYL---PPGKEKNLFEYLQENLEKNTEHLTGLSETPLDKVDRAEVVNYTRVTENFLRNLLTGVEDGLTSGGAMLQSS 556          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.79.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCD0_ECTSI1.810e-27782.93RBR-type E3 ubiquitin transferase n=2 Tax=Ectocarp... [more]
A0A6S9ISQ1_HETAK2.810e-19762.33RBR-type E3 ubiquitin transferase n=1 Tax=Heterosi... [more]
A0A836CMB7_9STRA1.260e-18759.15RBR-type E3 ubiquitin transferase n=1 Tax=Tribonem... [more]
A0A835Z7M6_9STRA1.470e-17155.44RBR-type E3 ubiquitin transferase n=1 Tax=Tribonem... [more]
A0A7R9UDV8_9STRA3.010e-15950.90RBR-type E3 ubiquitin transferase (Fragment) n=1 T... [more]
K3WFE7_GLOUD9.720e-15951.71RBR-type E3 ubiquitin transferase n=1 Tax=Globispo... [more]
H3GR83_PHYRM1.400e-15851.94RBR-type E3 ubiquitin transferase n=22 Tax=Phytoph... [more]
A0A0P1AN56_PLAHL4.300e-15851.95RBR-type E3 ubiquitin transferase n=1 Tax=Plasmopa... [more]
A0A5D6YAY3_9STRA7.980e-15752.95RBR-type E3 ubiquitin transferase n=1 Tax=Pythium ... [more]
A0A8K1CFB5_PYTOL1.290e-15451.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:659534..668180 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score788.1
Seed ortholog evalue2.5e-225
Seed eggNOG ortholog2880.D8LCD0
KEGG koko:K11968
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009653,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0016567,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0030154,GO:0030162,GO:0030435,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031624,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032502,GO:0032991,GO:0036211,GO:0042176,GO:0043170,GO:0043412,GO:0043934,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044390,GO:0044424,GO:0044464,GO:0045732,GO:0045862,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0061136,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901800,GO:1902494,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1990234,GO:2000058,GO:2000060
EggNOG free text desc.ubiquitin conjugating enzyme binding
EggNOG OGsKOG1815@1,KOG1815@2759
Ec32 ortholog descriptionubiquitin-conjugating enzyme E2-binding protein 1
Ec32 orthologEc-14_005210.1
EC2.3.2.31
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Exons7
Model size2802
Cds size1545
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928784.993979-UTR-F-serratus_M_contig10:659533..6596261622928784.993979-UTR-F-serratus_M_contig10:659533..659626Fucus serratus maleUTRF-serratus_M_contig10 659534..659626 +
1690962569.931961-UTR-F-serratus_M_contig10:659533..6596261690962569.931961-UTR-F-serratus_M_contig10:659533..659626Fucus serratus maleUTRF-serratus_M_contig10 659534..659626 +
1622928785.0115442-UTR-F-serratus_M_contig10:660158..6603481622928785.0115442-UTR-F-serratus_M_contig10:660158..660348Fucus serratus maleUTRF-serratus_M_contig10 660159..660348 +
1690962569.9443474-UTR-F-serratus_M_contig10:660158..6603481690962569.9443474-UTR-F-serratus_M_contig10:660158..660348Fucus serratus maleUTRF-serratus_M_contig10 660159..660348 +
1622928785.1201034-UTR-F-serratus_M_contig10:667206..6681801622928785.1201034-UTR-F-serratus_M_contig10:667206..668180Fucus serratus maleUTRF-serratus_M_contig10 667207..668180 +
1690962570.009978-UTR-F-serratus_M_contig10:667206..6681801690962570.009978-UTR-F-serratus_M_contig10:667206..668180Fucus serratus maleUTRF-serratus_M_contig10 667207..668180 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928785.027919-CDS-F-serratus_M_contig10:660348..6605931622928785.027919-CDS-F-serratus_M_contig10:660348..660593Fucus serratus maleCDSF-serratus_M_contig10 660349..660593 +
1690962569.9541225-CDS-F-serratus_M_contig10:660348..6605931690962569.9541225-CDS-F-serratus_M_contig10:660348..660593Fucus serratus maleCDSF-serratus_M_contig10 660349..660593 +
1622928785.0424166-CDS-F-serratus_M_contig10:662343..6624251622928785.0424166-CDS-F-serratus_M_contig10:662343..662425Fucus serratus maleCDSF-serratus_M_contig10 662344..662425 +
1690962569.9642649-CDS-F-serratus_M_contig10:662343..6624251690962569.9642649-CDS-F-serratus_M_contig10:662343..662425Fucus serratus maleCDSF-serratus_M_contig10 662344..662425 +
1622928785.0547714-CDS-F-serratus_M_contig10:663746..6643821622928785.0547714-CDS-F-serratus_M_contig10:663746..664382Fucus serratus maleCDSF-serratus_M_contig10 663747..664382 +
1690962569.9730911-CDS-F-serratus_M_contig10:663746..6643821690962569.9730911-CDS-F-serratus_M_contig10:663746..664382Fucus serratus maleCDSF-serratus_M_contig10 663747..664382 +
1622928785.0680835-CDS-F-serratus_M_contig10:664804..6649651622928785.0680835-CDS-F-serratus_M_contig10:664804..664965Fucus serratus maleCDSF-serratus_M_contig10 664805..664965 +
1690962569.9820833-CDS-F-serratus_M_contig10:664804..6649651690962569.9820833-CDS-F-serratus_M_contig10:664804..664965Fucus serratus maleCDSF-serratus_M_contig10 664805..664965 +
1622928785.082108-CDS-F-serratus_M_contig10:665766..6659311622928785.082108-CDS-F-serratus_M_contig10:665766..665931Fucus serratus maleCDSF-serratus_M_contig10 665767..665931 +
1690962569.9916546-CDS-F-serratus_M_contig10:665766..6659311690962569.9916546-CDS-F-serratus_M_contig10:665766..665931Fucus serratus maleCDSF-serratus_M_contig10 665767..665931 +
1622928785.098888-CDS-F-serratus_M_contig10:666950..6672061622928785.098888-CDS-F-serratus_M_contig10:666950..667206Fucus serratus maleCDSF-serratus_M_contig10 666951..667206 +
1690962570.0010462-CDS-F-serratus_M_contig10:666950..6672061690962570.0010462-CDS-F-serratus_M_contig10:666950..667206Fucus serratus maleCDSF-serratus_M_contig10 666951..667206 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.79.1prot_F-serratus_M_contig10.79.1Fucus serratus malepolypeptideF-serratus_M_contig10 660349..667206 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig10.79.1

>prot_F-serratus_M_contig10.79.1 ID=prot_F-serratus_M_contig10.79.1|Name=mRNA_F-serratus_M_contig10.79.1|organism=Fucus serratus male|type=polypeptide|length=515bp
MEDERGDDEYDYEYEDEDIDDDDMAAGMESGGASAAPARTPGGASSTSVS
DVDVSLSDDSSVAFINQEQLKALMAKVVADISETVNVSEDAATALLRHFS
WNRERLFDQYYSAPETVMEKVGLGLSGGQKASRPGEDEALLCRICCDHYK
GRESFALACSHFFCQGCWVAYLSAKVHEGPTCVYATCPEHKCPQIVSEAV
FKEFGSEEDLKRYQTFSLTSFVDINKTLRFCPGKDCGMVVKAPLSYARSV
RCNCGSVFCFRCGEEAHDPATCTELTLWKEKCQNESETANWILANTKQCP
KCKTRIEKNQGCNHMTCRQCKGEFCWICMGDWTEHGSTTGGYYKCNKYEA
KEGEGDTDVAKAKAELDRYLHYYKRYQAHHSSQQIAEKQSDATERRMVEL
QETSAGSAWIDVQFLRTAMEQLIECRRVLKYTYVMSYYIEEKTPAKELFE
HHQENLEKYTEHLHELSESPLDCIDRTNVINYTRCTDRFCKSMLQSVKEG
LGDMLESSAASVKA*
back to top

mRNA from alignment at F-serratus_M_contig10:659534..668180+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig10.79.1 ID=mRNA_F-serratus_M_contig10.79.1|Name=mRNA_F-serratus_M_contig10.79.1|organism=Fucus serratus male|type=mRNA|length=8647bp|location=Sequence derived from alignment at F-serratus_M_contig10:659534..668180+ (Fucus serratus male)
GCTTGTTTCACCCACTCTTGGTTTCTCACGACCACTGTCGAAGCAGAAAT CGAGGTCAAGCTCTCGCTTGGCTGTGAGAAAATTCAGGTCGAGGTGAGTG CCGAAACTTACTTTTTGTATTAGTTACAGCATGGAGTAAGTTCTCTTGTC TTACCACCTCTCTTCATCCAAAAGCAACATTCTCTCGGGTGAACGCGGGC AACTCCATGCTTTCAGTCTCTAATTTTTCCACACTGCAGTTTCGCAAACT TTTTCTACGAGAGGCCGACAGGGACGAGACTTGAAGAGTCACTGGCGCGG GTCGGTGTCGTTCGGTCTCTGTTTCCCGTTCCTGAACGTACAAAAAGATC TCTCTCTTCCCCCCGAGAGCTAGAAATGGTGCAAGGAGCTGGCATCGTAA ATTCTCGGTTTCTCGGCAGAGGGTTGAAAGCCCGACGAAAACGGAACGGA GTCTCCCGGTACCCCAATGACCCGTACACCATCTTTTGCCGCCTTCCCTG CCTCCAAATGTACAGACCTACGCAATTTTTACAACTGTGTTCGTCATGCC AATTCACTCTCTTGCCCTTGTCCCTTTTCCGGCTGTTTTTCGTTTGAATT GCTGTGGGTTTTTGCCGGGATCAAGTTCGGACTTTTTGTAAAGATAAAAC GTACACTGTACTAGTCATTATTAATAGTACTTGCACACTTGGTGGTACCT TGGCAGACACACGACTCGCCAGTGTACGCAGACAAAGTACGTGCCCTCTT TTGGGCGTTTTACCTCCTGCTGTAGTGTGGCCGAAAAAAACTCCGTCCGA CTGCCGAGGCCCACCATGGAAGACGAACGAGGAGACGATGAGTATGACTA CGAGTACGAAGACGAGGATATCGATGACGATGACATGGCGGCGGGAATGG AATCTGGCGGGGCCAGCGCGGCGCCGGCGCGAACGCCGGGCGGAGCCTCC TCGACATCGGTGTCGGACGTAGACGTCTCCCTCAGCGACGACAGCAGCGT CGCTTTCATCAACCAAGAGCAGCTCAAGGCGCTTATGGCCAAGGTCGTGG CCGACATCAGGTACATTACATTACATTGTTAGTAATAGTAAGTTTGTCTC TTTGTGCGTTTCGGCGAAGCCCTGTCTGCGTAAGACGGTGGTTGATTCTG TATAAAACTAAAACTCCATAAAATGTGTTGCTTTTTACAGCTCACCCTTA CTCTTCAATACAACAACCTGCTGCCCAAAGTGAAATCGCAAAACGTGATG AGACGAGGAGTGCTTGAAGAGCCGGTACAGACGGCACAGTCAGAAAATAA ACCACTGTCTTGTACCTGGTACGCTACATACATCGTATTCGTCGAAACAA ATAATTCTAAACAGCACTTGCTCCTGCTGATCGATAGTGATTGACTCGTT TACCAAGTACCTCTGTCTATGTTCCTTCCCACCCATGAACGTTTCAACAA TTTCTTCCCCCCCGATTGGTGGCTTCTCAGAAGGTTTGCAGGTGCGTTCA TTTTTTTCTTTTAAAAACGACAGGTACTACTACTGTTGCGATAGGTAATA CTGTTGTCTGTTGTCTGTACCTCTTACAAGAAAGTATTGATGCACACTAA CTATTCCTTTATGTACTGGTACGCCGGCTCTCTGGTACTATTATAATCAC TATACTGCACAAGCAGGAAATGTCTTGAGAGTTGTCTTTGCTCCTAAACC GATACAAAAGATTTGGGACTCGACACCTGCTTGGTTGACGAAACTCTTCA AGTCCAAACAAAGTACGGCAGTTCGTGTACCATAGGTACAAGACAACTAC TGTTGTACATGCCTTATAGTTATTAGTGTCGTATCACTTGAAAAGAGGAA ATTAAAAAAAAAGTTCTGTACGAAGCATACAGCCCACATGGCGATGATGA GTTGAAGGACAGGCACGACTTCCTACTGTAAAGTATTCGTTAGCCGCGAG ACCAGGCGCTGGCAGGGGAACCATAGCCTTTTGTCCGGGCTACTCGTAGG CAACTCAAATATTCAAATACTACAGTACCTTTCGTCGGTCATTCACTCGG CAGGGCTCTGACTTACAAGTGATACACGTATGTTTTTTTCGCACCTTATC CTGAAGAGAACTTTTTACGTCCTTTAATAAAATAGGAAGCGGAGCTTGGC GTTCGTCCGCACTGGTAGTGTATGATCACATATAGCAAGAGTATGAATCA ATCAACCGGGTAAGGTTGCCAATCCTACTCGTGATCAGCTGAACAGGGAA AATGAATATTTTCCTGTCCCCGTTCGCGCCTGACAATTTGGTCTTGCGAG ACGGGTTCGGCCGTCCCGTCCCGCGTCAACCTGCTCATCGATATACTCAG GCTGAAATGTGATGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGC GTCCATTTATTTATTTTAACCGCTATACCCCATCGGGCCTGTCCCGAGTT GATCGGGTCACGCAATTGCCTGCCGAAAGTCTGCCGGCACAGGGCCAGTA AACCTCAAGGTAGTTCCCAACCGGTGCTGCCTTGGCAGGTCACCATGGAC CAATAAATATGCGCCTCTCTTTCCCACACCCACTATCGGTAGGAAGTGGT TATAGCACGTTGAAATTACCGGCGCAGTGTAGTCGAGCCCTGACACGCAG GCGCGCGCTATAACACCCATGAAGAAATGTTGAAGATATCCCGGTTGAGA ATTAACCTCAGCTCCCTCGTTCTACCCGCCTCGTCTTATATATGTGTATA TATGTATATATATCTGCTGCTGCTGCTGTTGCCTGTCGTCGTAATCGGTG TCATCTCCAGCGAGACTGTCAACGTTTCCGAAGACGCTGCGACAGCTTTG TTGCGTCACTTCTCTTGGAATCGCGAACGACTTTTCGATCAGGTACCAGT CTCGACACGTTTAACATAGAAATTGGAATCGCTACAAAGCCCACACATAA CATCAGTACAAAAATGAATAGCCACTACTACTCTGTACCATATTAAATAT TATTAGTAGGTAGAGTACTAAATACCTGGTAGTAGGTACTAGTGTTGGCG GGATTGAGATATTACGGTACTTCCGCTGACCGTAAGCAGTGGAATGGCAA GCATGCACGGTTACGGTTGATGTCGAAATTTTCTACCAGGTCATATTTAT AATGAATGAACGCGATGACCAACAACAAAAACATCAACAAAGTGTATAAT AATATGTCTTCATGGGTGTTACTCAGTACCCAGGTACAAATGAAACAGAC AAGTTTTGCTGTTTGTTGTTGTAATGAAGAAATGTCTCCATGGTAGTTAC TCAGTACCCCGGTACAAATTTAACAGCCAAATTTTGCTGTTACTAGTTGT AATGGAGAAATGTCTCCGTGATACTTGCTCAATACCCGGTACAAATCGAA GTATACAGAACATTGTGCTACTCGACCCTAGGAGCAGGGTCAGCAAAAAG GTTGAGGTATGAACTGTTTCGTGGCAAGATGCATGAGCGGCCGCTGCGCG ATGTACCCAAACCCCATTTTCCCAAGCCGTTCGCCCTTGAGGACAGCACA TCGCGGCGCAACATTGCGAGCATCCGTTCCTGCAGAATTTACCTGACCGT TGTGCTCCAGGGGAATATTCTTTTCCCTGTTCAGCTGACCACGAGCAGGA TTGGCAGCCGTACCAGGTTGATCCATACTCTGCTATATGTGATGACCATA CATACATACATACATGACTGGAAGGTTCCGACTACACTATGATAACGAGA GAATGCCTCATCTTCATGACAACTATCAATACAAACAAGTTTTGCTGTTT GTAGTTGTAATGAAGATGAGGCACTCTCTCAATAGTAGAGTCGGAATCTT TCAGTCATGGAGCACAACGGTCAGGGAAATTCTGCAGGAACGGGTGCTCA AAACGTTGGGCCGCGAAGTGCTGTCCTCGAAGACGAACTGCTTGGGAAAA CGGGGTCGGGTACATCGCGCAGCGGCCGCCCATGCATCTTGAAACGAAAC AGTTCGTACATCAACCTTTTAGATGGCCATGCTTCTAGGGACGAGTAGCA CAATGTTTTGTCTACTACCTACACTTGAGACTGAAACTCCCATGGCGGCG ATCTATGTACGCAAACCACAGGCGATCGTTACCGTTTCCTTACCTACCCT CCGTACGCTCGCCTCGTGCTGCATTTTGTCCGTTTGGCGTTGACTCTGTA CACATCTTGGCAGTATTACTCCGCGCCCGAGACTGTGATGGAGAAGGTGG GCCTCGGATTGAGCGGTGGGCAAAAGGCGAGCAGGCCAGGGGAAGACGAG GCGCTCCTGTGCCGAATCTGCTGCGACCACTACAAGGGTAGGGAGTCGTT CGCCCTGGCGTGCAGCCACTTCTTCTGCCAAGGGTGCTGGGTGGCGTATC TGAGCGCGAAGGTCCATGAGGGCCCGACGTGCGTGTACGCTACCTGCCCT GAACACAAGTGCCCGCAGATCGTGAGCGAGGCGGTGTTCAAGGAGTTTGG TTCGGAGGAGGACCTGAAGCGCTATCAAACTTTTTCGCTGACGAGCTTCG TCGACATCAACAAGACGCTCCGCTTCTGCCCCGGCAAAGATTGCGGTATG GTGGTGAAGGCGCCGCTGAGCTACGCGCGAAGCGTGCGGTGTAACTGTGG GTCCGTGTTCTGCTTCCGCTGTGGGGAGGAGGCGCACGACCCGGCGACGT GCACGGAGCTGACGCTGTGGAAGGAGAAATGTCAGAACGAAAGCGAGACG GCCAACTGGATCTTGGCCAACACGAAGCAATGCCCCAAGTGCAAGACACG CATCGAGAAGAACCAGGGGTGCAACCACATGACTTGCCGACAATGCAAGG TGGATTCACGCGTTTTTTGTTGGGTTGATGCCTTCGCACTTTCAGCAGAT TGTGGATCAACCAGATATGGTCTCGCGCTTGAGAATTTGGTCTCGCGAGA TATATTCGGCCGTCCTGTCCCGCGTCAGTCCGCTCATTCCCCACACCCGG GCTGAATTTGTTATTAGTCTGATGGTATACGCCGTCGTGCGGGCAATTAT TTCTACATCGAGATAGAGGTTTCTTACCGTTGACTGCCCACCTCTCGTGT CAGCCATACGTTCTACTTATCTTTATATCCTATTCGCCAAACCAAAGCCG ATATTCTCCTACGTGGGGGAAAAATCCGGCGGCCGTTTCCCAGAGGTTGA GTTTGGTGTGGGCCACTCGTGCCCGCACAATGTAAAAAAATACTCGGTGT CCCCTTCACACTCACGCGCAGGGGGAATTTTGCTGGATTTGCATGGGGGA CTGGACCGAGCACGGTTCTACAACGGGGGGATACTACAAGTGCAACAAGT ACGAGGCCAAGGAAGGCGAGGGAGACACGGACGTTGCCAAGGCCAAGGCG GAGTTGGATCGATACTTGCACTATTACAAGAGGTGAAAGGAGGCGTGGTG AATTTTTAATAACGGGTTGCGGTGTTTGTCGAGAGCGCGATCAATTTGAG GGGAGGTCCTCTCGCGCGTCGAGTTTTTGTTGCGGTTGCCGTCCCCAAGT CTCGTGTACTCGCTTGCTTCGTTGGTTGGCACGGCACCACGCCTGCCACT TCCAAAGGTTGCATGTTTTGCGATCGATCGACGACACCCCTAGTGTGGAA AATATTTTTATTTCGCCTTTTGCGTCACCTGCGCAAGGGTTATTACCATG GCTCTTATTTTAGCGTTTCAAGTGCCGGGCGGTGCATGCCAACAAACGTC AAACGGACTCGTCGTCTTCTACAGTAGCTTCAAAAGCCGCTTTCCACGTT CTCCGCTCAGCCGCGCCTGCCTTCTTGAGGGCGTACTCGCAGCTCTCACG ATTATGCTTTGCGCTGATTCTGGACACAAGAATTACTCGCGTCTCTTGAC ATATATACAAGAGTAACACGCCACCCTTTAGTGTCAAACCGATATGTTCG TTCGCATTATGTGAAGACATGTTTTTACTTTCCCATCCACGCCAATAATT ATGTAACATGAACTCCAAGAGGTTTCCACTTAGCTTAGCGGCGTTTTTAG TTCAGCACAAACGTTTTCAGAAAGACAAAAACATGCCGGGTTAAACCCGA CGTAAGCGCTGCCGTAGCCTTTTTCTACAAGGTAGTGCCATCCCCGTGGC TATGTCCCTCGAACCAGTCCGTGAATTCACACATGGCGAGGCGCTCACTT TTATGGGGTTGGCTTTTTGTTATCTTGATACAGGTATCAGGCGCACCACT CCTCGCAGCAGATCGCCGAGAAACAGTCAGACGCCACAGAACGGCGAATG GTGGAACTCCAGGAGACTTCGGCGGGGAGCGCATGGATCGACGTACAGTT CTTAAGGACGGCCATGGAACAACTCATCGAGTGCCGTCGCGTTCTCAAGT GAGTGATGCGTTTCTTACCTCTCTCGTCCGCACCCCTCTTACCCCTTCCC AAGACGGAGGTTGTCTCCTTATTACATTGCCAGCACACGGCTTTCGCTGC GGTGTGCTTGGTTTACGCCGTGCAAACCTGGTGGTTTCATTCTGGGGGGG GGGGAGGGTCAGACGAAAGGATTGGATTTCATTGTGCTGGGATTTTATCG TAGAACAGCTTCTACCGGGGGCGAATCAGAAGGTCTAGGTGCGTTCGAGT GTCAAGGGGGATAAGGTTGTCCCGCGTCGGGACCTTTCTATCGATAGAGA GGATGTCGACATTTTTCGATATCGTTGATGCATCTACCGATGCTTGCGAC AAACTGTGGTTCTCCATTGAGATATACCATGTACTATAAAACGTATAAAA TTGTGCCATACTTCGGTATAAACTCAGCACCTTGTTTGTTGAGTGTTTCA GCAGAGCATGGATCAACCGGTAATGGTTTCCGATCATGCTCGTGGTTGGT TGAAAAATGGAAATGTTTTCCTCCCTATCCCCGTTCGCGCCTTAGAATTT GATCTCGCGAGACGGATTAGATGACATTTTATTTAAATGTTTCCGAGAGC AAGGCCGATAGTGTATGTGTGTCTTGTGTCTTCGCGTCCCTGTTTTGGTT GTGGTCCTTACGTGGCGGTAAGTTTATAACGCTGAACTCTTGACCCTATA CGACGATCGCCGGGAAACCCGCCTAAATTCCATGTACGGATTTTTATGGT AACAGTCGATCAATGTTCCCATCCAAATGTTTTGACGCAAGGTTTGGAAA CGGTCAGATTTTATTGGAAAGAACTGTGGGGTTTGGAGGGGGGGTGTAGC CGCGAAATATGCACCGCAGTTCTATTGTAGCGGTTGTACATGGTCATGCA CGCGAACTCCCAAGTGCGGTCGTCGCGCATCAGAGTGATCTTCATCGCCC GTTTTTGCCCCCCAAAAGTCTTGAAAGTAACTAACATGAGCCCGACAACG ACGTCGATCGGCGGCAGGTACACGTACGTGATGAGCTACTACATCGAGGA GAAGACTCCAGCGAAAGAGCTGTTTGAGCACCACCAGGAGAACCTGGAAA AGTACACGGAGCACCTTCACGAACTGTCGGAGTCGCCGCTAGACTGCATC GACCGTACCAACGTGATCAACTACACGCGCTGTACCGACCGCTTCTGCAA AAGCATGCTGCAAAGCGTCAAGGAAGGCCTGGGGGATATGCTGGAGAGTT CCGCAGCATCCGTCAAGGCGTGATGGAAAGAGTCAGAACGGGGACGAAAG CGAGGATGCAGCACACCCACACACGGGGAAAATAAGGAGAGTTAGATGGG TTTTTTTCAGGGTTTTGGAGTTAGGGGGGGGGGGGGGGAGGAAGCGGTTG TGTTGTGGGTGTGGCAACCAAACGTGTGTGGACGGAGCATCGTGTTCCGG AGCGCACTTTGGAATCGCTGCTGACAGATTGTGGTGGACGTGTGTCGAAG GTGGCTTCGTACCGATGGTTCTTAGGGGAAAGCGCAATGCGCGTGTTAGA CATGTTGTCCCCCGTCCTCCCCGTTCCCGAAAAATGGTCGCCGGGGTCGC CAGGGAGAGAGCGGGATTTAAGTCGGTCGGCTTACGCACACGCTTTTTCT TCAAGGAGGAATCGCACCGTTTCCGTGTTGCTAGAAGCGATGCCATCGTT TCAGGGGATGACGAGCGACGTGACTGAGGGGGGGAGGAAGGCGGACAAGA GAGAGGATGGAAAGAGAGGGTGAACGGATTTCCTCATAGTGCGGCGTCAC TGCCTTTCGGAGATAAGGAAGGCGTGGTGAGGCCAGGACTGGCTACCTAG CGGCTGTACGAGCCTCGCCGGACTCGAAGGTTGTGTATGACTGGACCCTG CCAGACGGAATTGTTTATATTAAGTGACGATAGTTTCTACCCAAAAGAGT TGTTGAGGAAAAAATAAAATAAAACGCGGCGTGGACCGGCCGGAGTCCGC AATCGTTGGCTCGTCTCCCGCGTGCATCCGTGCTGAAGTCGCCGTTTGAT GCTTACGCGCGGAGGCTTCACAGTATGGGACTCTTGTGCGTAGCTATCTT TTTTTCAAAGCTTCGTATCGCCCGCACTACATTTTGTTGTGTGCATTTCG TTTCGTTTCGTTGTCTATATTTCCAAATTTTTCTGTAAACATCGCTCTTT GCTGTTTTTATTTGGCAAGGATCGAGTTTCCAAAAGTGACTTCGTGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig10:659534..668180+

>mRNA_F-serratus_M_contig10.79.1 ID=mRNA_F-serratus_M_contig10.79.1|Name=mRNA_F-serratus_M_contig10.79.1|organism=Fucus serratus male|type=CDS|length=3090bp|location=Sequence derived from alignment at F-serratus_M_contig10:659534..668180+ (Fucus serratus male)
ATGGAAGACGAACGAGGAGACGATGAGTATGACTACGAGTACGAAGACGA
GGATATCGATGACGATGACATGGCGGCGGGAATGGAATCTGGCGGGGCCA
GCGCGGCGCCGGCGCGAACGCCGGGCGGAGCCTCCTCGACATCGGTGTCG
GACGTAGACGTCTCCCTCAGCGACGACAGCAGCGTCGCTTTCATCAACCA
AGAGCAGCTCAAGGCGCTTATGGCCAAGGTCGTGGCCGACATCAGATGGA
AGACGAACGAGGAGACGATGAGTATGACTACGAGTACGAAGACGAGGATA
TCGATGACGATGACATGGCGGCGGGAATGGAATCTGGCGGGGCCAGCGCG
GCGCCGGCGCGAACGCCGGGCGGAGCCTCCTCGACATCGGTGTCGGACGT
AGACGTCTCCCTCAGCGACGACAGCAGCGTCGCTTTCATCAACCAAGAGC
AGCTCAAGGCGCTTATGGCCAAGGTCGTGGCCGACATCAGCGAGACTGTC
AACGTTTCCGAAGACGCTGCGACAGCTTTGTTGCGTCACTTCTCTTGGAA
TCGCGAACGACTTTTCGATCAGCGAGACTGTCAACGTTTCCGAAGACGCT
GCGACAGCTTTGTTGCGTCACTTCTCTTGGAATCGCGAACGACTTTTCGA
TCAGTATTACTCCGCGCCCGAGACTGTGATGGAGAAGGTGGGCCTCGGAT
TGAGCGGTGGGCAAAAGGCGAGCAGGCCAGGGGAAGACGAGGCGCTCCTG
TGCCGAATCTGCTGCGACCACTACAAGGGTAGGGAGTCGTTCGCCCTGGC
GTGCAGCCACTTCTTCTGCCAAGGGTGCTGGGTGGCGTATCTGAGCGCGA
AGGTCCATGAGGGCCCGACGTGCGTGTACGCTACCTGCCCTGAACACAAG
TGCCCGCAGATCGTGAGCGAGGCGGTGTTCAAGGAGTTTGGTTCGGAGGA
GGACCTGAAGCGCTATCAAACTTTTTCGCTGACGAGCTTCGTCGACATCA
ACAAGACGCTCCGCTTCTGCCCCGGCAAAGATTGCGGTATGGTGGTGAAG
GCGCCGCTGAGCTACGCGCGAAGCGTGCGGTGTAACTGTGGGTCCGTGTT
CTGCTTCCGCTGTGGGGAGGAGGCGCACGACCCGGCGACGTGCACGGAGC
TGACGCTGTGGAAGGAGAAATGTCAGAACGAAAGCGAGACGGCCAACTGG
ATCTTGGCCAACACGAAGCAATGCCCCAAGTGCAAGACACGCATCGAGAA
GAACCAGGGGTGCAACCACATGACTTGCCGACAATGCAAGTATTACTCCG
CGCCCGAGACTGTGATGGAGAAGGTGGGCCTCGGATTGAGCGGTGGGCAA
AAGGCGAGCAGGCCAGGGGAAGACGAGGCGCTCCTGTGCCGAATCTGCTG
CGACCACTACAAGGGTAGGGAGTCGTTCGCCCTGGCGTGCAGCCACTTCT
TCTGCCAAGGGTGCTGGGTGGCGTATCTGAGCGCGAAGGTCCATGAGGGC
CCGACGTGCGTGTACGCTACCTGCCCTGAACACAAGTGCCCGCAGATCGT
GAGCGAGGCGGTGTTCAAGGAGTTTGGTTCGGAGGAGGACCTGAAGCGCT
ATCAAACTTTTTCGCTGACGAGCTTCGTCGACATCAACAAGACGCTCCGC
TTCTGCCCCGGCAAAGATTGCGGTATGGTGGTGAAGGCGCCGCTGAGCTA
CGCGCGAAGCGTGCGGTGTAACTGTGGGTCCGTGTTCTGCTTCCGCTGTG
GGGAGGAGGCGCACGACCCGGCGACGTGCACGGAGCTGACGCTGTGGAAG
GAGAAATGTCAGAACGAAAGCGAGACGGCCAACTGGATCTTGGCCAACAC
GAAGCAATGCCCCAAGTGCAAGACACGCATCGAGAAGAACCAGGGGTGCA
ACCACATGACTTGCCGACAATGCAAGGGGGAATTTTGCTGGATTTGCATG
GGGGACTGGACCGAGCACGGTTCTACAACGGGGGGATACTACAAGTGCAA
CAAGTACGAGGCCAAGGAAGGCGAGGGAGACACGGACGTTGCCAAGGCCA
AGGCGGAGTTGGATCGATACTTGCACTATTACAAGAGGGGGAATTTTGCT
GGATTTGCATGGGGGACTGGACCGAGCACGGTTCTACAACGGGGGGATAC
TACAAGTGCAACAAGTACGAGGCCAAGGAAGGCGAGGGAGACACGGACGT
TGCCAAGGCCAAGGCGGAGTTGGATCGATACTTGCACTATTACAAGAGGT
ATCAGGCGCACCACTCCTCGCAGCAGATCGCCGAGAAACAGTCAGACGCC
ACAGAACGGCGAATGGTGGAACTCCAGGAGACTTCGGCGGGGAGCGCATG
GATCGACGTACAGTTCTTAAGGACGGCCATGGAACAACTCATCGAGTGCC
GTCGCGTTCTCAAGTATCAGGCGCACCACTCCTCGCAGCAGATCGCCGAG
AAACAGTCAGACGCCACAGAACGGCGAATGGTGGAACTCCAGGAGACTTC
GGCGGGGAGCGCATGGATCGACGTACAGTTCTTAAGGACGGCCATGGAAC
AACTCATCGAGTGCCGTCGCGTTCTCAAGTACACGTACGTGATGAGCTAC
TACATCGAGGAGAAGACTCCAGCGAAAGAGCTGTTTGAGCACCACCAGGA
GAACCTGGAAAAGTACACGGAGCACCTTCACGAACTGTCGGAGTCGCCGC
TAGACTGCATCGACCGTACCAACGTGATCAACTACACGCGCTGTACCGAC
CGCTTCTGCAAAAGCATGCTGCAAAGCGTCAAGGAAGGCCTGGGGGATAT
GCTGGAGAGTTCCGCAGCATCCGTCAAGGCGTGAGTACACGTACGTGATG
AGCTACTACATCGAGGAGAAGACTCCAGCGAAAGAGCTGTTTGAGCACCA
CCAGGAGAACCTGGAAAAGTACACGGAGCACCTTCACGAACTGTCGGAGT
CGCCGCTAGACTGCATCGACCGTACCAACGTGATCAACTACACGCGCTGT
ACCGACCGCTTCTGCAAAAGCATGCTGCAAAGCGTCAAGGAAGGCCTGGG
GGATATGCTGGAGAGTTCCGCAGCATCCGTCAAGGCGTGA
back to top