mRNA_F-serratus_M_contig10.66.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig10.66.1
Unique NamemRNA_F-serratus_M_contig10.66.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: D0NPR4_PHYIT (Pre-mRNA-processing factor, putative n=15 Tax=Phytophthora TaxID=4783 RepID=D0NPR4_PHYIT)

HSP 1 Score: 483 bits (1244), Expect = 1.970e-158
Identity = 287/637 (45.05%), Postives = 367/637 (57.61%), Query Frame = 3
Query:   93 TMNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIH-NPKAEHFRAPVQGPAHPHKREL----PVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNL----AEHGKRQGDTVLTADAGGV--RRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREK--TDFEAGRMTEEQSKFREAWEAEQAKKHR-----EYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            TM  L  Y S    S DE    S +P R     S   P VN+AP V  S + DQA+             K +    G Q  +  N   E   AP  GP      EL    P+ AG       GV+EQ  +ED+SF  QYHTF++       R    G      A  G+   D ++  D   V  RR  KK      N+   +   +  A  D G+ ++D +WAP   + K  TD E   M E+Q   RE  E ++AK+ +     E + E D DR  ERK SHLLP R      + + +STF G  ++DYQGR+W+ PP    L+ +  DHQ F PK+C+H++ GHTKGVQAI  FP +GHLLLS SMD TV+IWDV   R  +R Y GH+AAVR + FSNDGKQF+S  +DRF++ WDTETGQ + +FT R++PYC KFYP+DN  F+ G S+N VV                             +RFVSTSDDKK+L+WE+ IPVPIKYISEP MH+MPA TLHPSGGFF GQSL+N+I  +TARDKF+  RKK F+GH NAGYAC++ FSPNG+F+ SGDGQGK+  WDW ++K+ +K   HD GP +   WHPLEPS V + GWDG+IK WD
Sbjct:   12 TMEALGAYAS----SEDETPPHSTSP-RSTDAPSLSLPVVNSAPFVAHSDSQDQAN-------------KTAFLSAGSQRRLAVNLPVESTLAPFMGPQSGDSTELALMDPLRAGSGKEVVTGVVEQADMEDYSFEAQYHTFNETLSRNIPRNRVKGAPPSAPALPGEIIPDNIVAPDEEDVFTRRNAKKR----KNQ---IISKERAAAEDFGDENSDGIWAPYKDKNKHFTDAELDIMNEQQKALRE--EHQEAKRRKAEAKSEVDEEMDFDRMVERKTSHLLPARLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPRS--LKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKFGHLLLSGSMDNTVRIWDVYNERKCQRVYEGHSAAVRGINFSNDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLKAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPGMHAMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKMNRKKTFRGHQNAGYACQIGFSPNGQFVMSGDGQGKLAFWDWKTSKMLQKLHAHDRGPTMGAIWHPLEPSKVVSCGWDGLIKYWD 619          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A5D6XJI7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJI7_9STRA)

HSP 1 Score: 481 bits (1237), Expect = 1.020e-157
Identity = 296/632 (46.84%), Postives = 373/632 (59.02%), Query Frame = 3
Query:   96 MNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKRELPVPAGGRATGTG-----GVIEQTSLEDWSFHEQYHTFHQ-FGYAVDCRGDTVGNLAEHGK---RQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREK-TDFEAGRMTEEQSKFREAW-EAEQAKKHREYNMEE--DHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQ-HDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M LLA Y S  ++ SD     SAA A   TI     P VN+AP V  +      +SSL +  +  L L  +    G Q+ ++ P A    APV GP     R           GTG     GV+E  SL+D SF  QYHT++Q  G A   R    G  A        + D+V TA     R  +K+     A E        + A   LG+   D VWAP A +   T  EAG MT EQ+  REA  EA++ K  R   ++E  D DR  E+K +HLLP R     E+  A S F    Q +DYQGR+W+ PP G + + +GE HQ F PK+C+H++AGHTKGVQAI  FP +GHLLLS S+D TV+IWDV   R  +R Y GH+ AVR + FSNDG+QF+SAG+DRF++ WDTETGQ +  FTNR++PYC KF P DN+ F+ G S+N VV                             +RFVSTSDDKK+LIWE+ IPVPIKYISEP MHSMPA TLHPSGGFF GQSL+N+I  + ARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGD  G++  WDW STK+Y+K + HD GPC+   WHPLEPS V + GWDG+IK WD
Sbjct:    1 MELLAHYASSSDDESD-----SAALAH-DTIAPL--PSVNSAPSVSFT------ASSLSSTSSAALALVAA----GKQLSVNLPVAATL-APVLGPHAGTGRSSDA----LTRGTGREIVTGVVENASLDDLSFDAQYHTYNQRHGGARLNRRAVSGAEAPTDAIVALEADSVFTA-----RNAKKRRNAALARE--------KAAAEQLGDESVDGVWAPFADKSVLTAAEAGTMTAEQAALREAHLEAKRQKAERASQVDEEMDFDRMIEKKTAHLLPARLKAGQEAMAATSAFLDAGQEYDYQGRAWVEPPRGLKPDPDGE-HQVFLPKRCVHKWAGHTKGVQAIELFPTFGHLLLSGSLDHTVRIWDVYNERKCKRVYEGHSGAVRAIHFSNDGRQFLSAGFDRFIQLWDTETGQSIKAFTNRRVPYCVKFSPADNSQFVIGDSNNMVVQFDARSGEVVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYAARDKFKLQRKKVFKGHSNAGYACQIGFSPNGQYVMSGDADGRLVFWDWKSTKLYKKLRAHDRGPCMGAVWHPLEPSKVVSCGWDGLIKYWD 595          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A7S4A1N7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A1N7_9STRA)

HSP 1 Score: 478 bits (1229), Expect = 1.020e-156
Identity = 254/548 (46.35%), Postives = 328/548 (59.85%), Query Frame = 3
Query:  333 MIHNPKAEHFRAPVQGPAHPHKRELP-VPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGD-TVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADR-DLGETDTDSVWAPEAPREKTDFEAGRMTEEQ-SKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFT-NRKMPYCAKFYPVDNNIFLCGCSDNR----VVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M  N  A   +APV GPA P     P V        +GG  E+ ++E WSF EQ+H+F   G+A   RG   VG + +                V++ RK+               +   +R D+G+ D   VWAPEA  E+   E  ++++++  +   A E+E+AK  R Y+  ED DRRDERKISHLLP RH+RDT + +AR+ FHG+ + DYQGR W  PP G       + H CF PK+CIHR+ GH+KGVQ I  FPGYGHLLLSAS+DG+ KIWDV   R   RTY GH+ AV+D   + D  QF+S G+DRF R WD ETG+ L T T  R+M  C +FYP D NI + G  D                                     + F+ST DDKK+ +WEY+IPVP KYISEP MHS+P    HP+  F+ GQS+DN IVT+TA ++ +Q RK+ FKGH+N+GYAC + FSP+GKF+ASGDG+GK++ WD+ ST+ YRK Q HD GPCID AWHPLEPSWV TAGWD +IKLWD
Sbjct:   67 MKTNLPASIVKAPVAGPARPFDNAAPGVDRAAPNVHSGGTAERAAVEAWSFDEQFHSFQGHGFAQAARGSGVVGTVPDV---------------VQKPRKR---------------RRPVEREDIGDEDEHGVWAPEADPEE---EQEKISQDRLQEIASALESERAKNKRGYDQNEDFDRRDERKISHLLPARHDRDTVACEARTAFHGEQERDYQGRPWCMPPRGGIRSRVDDGHDCFIPKRCIHRFTGHSKGVQRILPFPGYGHLLLSASLDGSCKIWDVLNDRRCMRTYAGHSEAVKDCSLAPDASQFVSCGFDRFARVWDVETGKVLHTMTAERQMMNCVRFYPKDKNILVAGAGDATSGKIFQWDLREKGEPTLVYNHHLAPCNSITFIDDGKSFISTGDDKKIFVWEYSIPVPTKYISEPHMHSVPIVRKHPTQQFWCGQSMDNSIVTYTAGERVKQQRKRTFKGHLNSGYACGITFSPDGKFVASGDGEGKLFFWDFKSTRTYRKLQAHDAGPCIDCAWHPLEPSWVFTAGWDNLIKLWD 581          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A2D4CLB3_PYTIN (Putative pre-mRNA splicing factor n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CLB3_PYTIN)

HSP 1 Score: 478 bits (1230), Expect = 1.180e-156
Identity = 272/631 (43.11%), Postives = 373/631 (59.11%), Query Frame = 3
Query:   96 MNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKREL---PVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREK---TDFEAGRMTEEQSKFREAWEAEQAKKHR-------EYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M  LA Y S  E+ +     +  +        S   P VN+AP V     +D  +++L         L  ++     Q+ ++ P  +   AP  GP + + R     P   G       GV+E+T ++ +SF  QYHT++Q    +      +          GD+V T      + KR+ +              K  A+   G  DTD +WAP   +EK   TD EAG ++EEQ++ R+  E  +AKK +       E++ + D DR  E+K +HLLP R     ++ +AR+ F    ++DYQGR+W+ PP   + +E+ E H  + PK+CIH++AGHTKGVQAI  FP YGHLLLS S+D TV+IWDV   R  +R Y GH+ AVR + FSNDG+QF++ G+DRF++ WDTETGQ + +FTNR++PYC +++P DN  F+ G S+N VV                             +RFVSTSDDKK+LIWE+ IPVPIKYISEP MHSMPA TLHPSGGFF GQSL+N+I  +TARDKF+  RKK FKGH +AGYAC++ FSPNG++L SGDG+GK+  WDW STK+Y+K + HD GPC+ +AWHP+EPS V T GWDG+IKLWD
Sbjct:    1 MEGLAHYASSSEDEAPSAVRKQTSETVSSPTDSLSLPVVNSAPLVTT---VDPYTTALHQQ------LAAASTSSSQQLTVNLP-VDSTLAPHYGPENAYARASASNPALVGSGKEIVTGVVERTDMDGFSFDSQYHTYNQQHSGLSLNKAPMST-------DGDSVFTQRTIAKKSKRRPA------------QPKTFAEE-FGSHDTDGIWAPY--KEKGVLTDAEAGTLSEEQARIRQ--ERLEAKKRKAEERSNTEFDEDMDFDRMVEKKTAHLLPARLKPGQKAMEARTEFLDTQEYDYQGRAWVEPPRTLKPDEDAE-HAVYLPKRCIHKWAGHTKGVQAIELFPKYGHLLLSGSLDNTVRIWDVYNERKCKRLYEGHSGAVRGLNFSNDGRQFLTCGFDRFIQLWDTETGQAIKSFTNRRVPYCIRYHPEDNTNFVIGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKLCRKKVFKGHSSAGYACQIGFSPNGQYLTSGDGEGKLCFWDWKSTKMYKKLRAHDRGPCMGVAWHPIEPSQVVTCGWDGLIKLWD 596          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A8K1CNG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNG0_PYTOL)

HSP 1 Score: 472 bits (1215), Expect = 2.000e-154
Identity = 307/627 (48.96%), Postives = 382/627 (60.93%), Query Frame = 3
Query:   96 MNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADRD-LGETDTDSVWAPEAPREK-TDFEAGRMTEEQSKFREAWEAEQAKKHR-------EYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M  L GY S D+   DE            T T F  P VN+AP V  +     AS+  +A          S+ K+   + I +  A  +  P    A P +    +  GG+   TG V+E+  L+ +SF  QYHT     Y  +  G         G    D++++     V  KR  S           G   +    D  G  +TD +WAP   +   TD EA  +TEEQ K R+  E  QAKK +       EY+ + D DR  E+KISHLLP R     E+   RS F    ++DYQGRSW+ PP    L+ +  DHQ F PKKCIH++ GHTKGVQAI  FP YGHLLLS SMD TV+IWDV   R  +R Y GH+ A+R +QFSNDG+QF++  +DRF++ WDTETGQ + +FTNR++PYC KFYP DNN            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    STSDDKK+LIW++ IPVPIKYISEP M SMPA  LHPSGGFF GQSL+N+I  +TARDKF+  RKK FKGH NAGYAC++ +SPNG+FL SGDG+GK+ +WDW STK+Y+K + HD GPC+ +AWHPLEPS V T GWDG+IKLWD
Sbjct:    1 MEALVGYASSDD---DEPRTSKHEGVSSPTDT-FALPVVNSAPIVAVADPYMAASAQQLA--------AASSSKLSVNLPIDSTLAA-YHGPENAYARPGQSNPALIGGGKEIVTG-VVERADLDSFSFDAQYHT-----YNYNHTGMLPNKQQAPGTAASDSIVSHADDNVFTKRTTS---------KKGQKPQKTFNDEFGNPETDGIWAPYKEKSVLTDVEADTLTEEQEKIRQ--ERIQAKKRKAEERSNTEYHEDMDFDRMVEKKISHLLPARLKAGQEAMPGRSEFLDAQEYDYQGRSWVEPPRS--LKPDDGDHQVFLPKKCIHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERKCKRVYEGHSGAIRGIQFSNDGRQFLTCSFDRFIQLWDTETGQVVKSFTNRRVPYCIKFYPEDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSDDKKILIWDWGIPVPIKYISEPSMQSMPAVALHPSGGFFAGQSLNNQIDVYTARDKFKICRKKTFKGHSNAGYACQLGYSPNGQFLVSGDGEGKLCVWDWKSTKMYKKLKAHDRGPCMGVAWHPLEPSQVVTCGWDGLIKLWD 595          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A662Y947_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y947_9STRA)

HSP 1 Score: 469 bits (1208), Expect = 3.840e-153
Identity = 276/636 (43.40%), Postives = 365/636 (57.39%), Query Frame = 3
Query:   96 MNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQF--GYAVDCRGDTVGN-------LAEHGKRQGDTVLTADAGGV--RRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREK--TDFEAGRMTEEQSKFREAWEAEQAKKHR-----EYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M  L  Y S D+ +S    +  +A A+   +     P VN+AP V A+        +  A  T  L   + + K+   + + +  A  F  P    AH      P  AG       GV+E   +ED+SF  QYHTF+Q   G   + R             L       G+T+++A    V  RR  KK      ++       +  A  D G  + D +WAP   ++K  TD E G ++E+Q   R+A +  +AKK +     E + E D DR  E+K +HLLP R      + +A S F G  ++DYQGR+W+ P     L+ +  DHQ F PK+C+H++ GHTKGVQAI  FP YGHLLLS SMD TV+IWDV   R  +R Y GH+ AVR + FSNDGKQF+S  +DRF++ WDTETGQ + +FTNR++PYC KFYP+DN  F+ G S+N VV                             +RFVSTSDDKK+L+WE+ IPVPIKYISEP MHSMPA  LHPSGGFF GQSL+N+I  +TARDKF+  RKK FKGH +AGYAC++ FSPNG++L SGDG+GK+  WDW STK+ +K + HD GP +   WHPLEPS V + GWDG+IK WD
Sbjct:    1 MEALGQYASSDDEASPSPSSPRSADAQALAL-----PVVNSAPFVGAT------DPNAAATATAFLTAASQS-KLAVNLPVESTLAP-FVGPQSSDAHGLALTDPRRAGSGKETVTGVVEHAEMEDFSFEAQYHTFNQTHTGLGSNSRPRRPSGAPPAPPALPGASAESGNTLVSAGDENVFTRRNAKKRKNQMISK-------ERAAAEDFGLVEQDGIWAPYQEKQKALTDAELGTLSEQQKALRDAHQ--EAKKRKAEARDEVDEEMDFDRMVEKKTAHLLPARLKAGQTAMEATSAFLGSQEYDYQGRAWVEPARS--LKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPRYGHLLLSGSMDHTVRIWDVYKERECQRVYEGHSGAVRGINFSNDGKQFLSCSFDRFIQLWDTETGQSVHSFTNRRVPYCVKFYPLDNTSFVVGDSNNMVVQFDCRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVALHPSGGFFAGQSLNNQIDVYTARDKFKLCRKKVFKGHASAGYACQLGFSPNGQYLLSGDGEGKLVFWDWKSTKMLKKLRAHDRGPTMGAIWHPLEPSKVVSCGWDGLIKYWD 612          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: M4BWF7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWF7_HYAAE)

HSP 1 Score: 466 bits (1199), Expect = 4.320e-153
Identity = 244/520 (46.92%), Postives = 320/520 (61.54%), Query Frame = 3
Query:  444 GVIEQTSLEDWSFHEQYHTFHQFGYAVD------CRGDTVGNLAEHGKRQGDTVLTAD-------AGGVRRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAP--EAPREKTDFEAGRMTEEQS---KFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            GV+E  ++ED SF  QYHTF+   Y  +       +G      +  G++  DT+   +         G +RK K S               + A  D+G+ +T  +WAP     R  +D E G M+E+Q    K  E  +  +A+   E + E D DR  E+K SHLLP R      + + +S F G  ++DYQGR+W+APP G  L+ +  DH+ F PK+C+H++ GHTKGVQAI  FP YGHLLLS SMD TV+IWDV   R  +R Y GH+ AVRD+ FS DG+QF+S  +DRF++ WDTETGQ + +FT R++PYC KFYP+DN  F+ G S+N VV                             +RFVSTSDDKK+L+WE+ IPVPIKYISEP MHSMPA TLHPSGGFF GQSL+N+I  + ARDK +  RKK FKGH NAGYAC++ FSPNG+++ SGDG+GK+  WDW STK+ +K + HD GP +   WHPLEPS V + GWDG+IK WD
Sbjct:   15 GVVEHAAIEDLSFEAQYHTFNHTFYTANGIARNRVQGAPPPAPSLPGEKIADTIAVLNDDDVFTRQNGRKRKNKSSA------------KAQAAGEDVGDEETSGIWAPCETKGRFMSDLEQGTMSEQQKALLKEHEETKRRKAEARNEVDEEMDFDRMVEKKTSHLLPARLKAGQTALEGKSKFCGDQEYDYQGRAWVAPPRG--LKPDDGDHEIFVPKRCVHKWTGHTKGVQAIELFPQYGHLLLSGSMDNTVRIWDVYNDRKCQRVYEGHSGAVRDINFSTDGRQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDARSGEIVQEYNHHLQAVNSVTFVDGNKRFVSTSDDKKLLVWEWGIPVPIKYISEPGMHSMPAVTLHPSGGFFAGQSLNNQIDVYAARDKIKINRKKVFKGHQNAGYACQIGFSPNGQYIMSGDGEGKLVFWDWKSTKMIKKLRAHDRGPTMGAIWHPLEPSKVVSCGWDGLIKYWD 520          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A3M6VT76_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT76_9STRA)

HSP 1 Score: 468 bits (1205), Expect = 1.630e-152
Identity = 273/633 (43.13%), Postives = 365/633 (57.66%), Query Frame = 3
Query:   90 VTMNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKREL----PVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNL----AEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREK--TDFEAGRMTEEQSKF-REAWEAEQAKKHR--EYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
              M  L  Y S DE  S     R ++        SF  P +N++P +  S   DQA+       T  L     T     Q+ ++ P  E   AP   P   +  +     P+ AG       GV+E T+LED+SF  QYHTF+Q       R    G      A  G+++ ++ +  +   V  K++K+         +    +  A  D GE  T  +WAP   + K  TD E G +TE+Q    +E  EA++ K     E + E D DR  E+K +HLLP R     ++ + +STF G  ++DYQGR+W+ PP    L+ +  DHQ F PK+C+H++ GHTKGVQAI  FP YGHLLLS SMD TV+IWDV   R  +R Y GH+ AVR + FS DG+QF+S  +DR+++ WDTETGQ + +FT R++PYC KFYP+DN  F+ G S+N VV                             +RFVSTSDDKK+L+WE+ IPVPIKYISEP MHSMPA TLHPSGGFF GQSL+N+I  ++ARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGDGQGK+  WDW +TK+ +  + HD GP +   WHPLEPS V + GWDG+IK WD
Sbjct:   23 AVMEALGVYASSDEEES-----RRSSTLHSTNSPSFSLPVINSSPFITVSDHQDQANK------TAFLTAGTQT-----QLALNLP-IESTLAPYIVPQGLNSTDASILDPLRAGSGKEIVTGVVEPTNLEDYSFEAQYHTFNQTLSHKLTRNRVKGAPPTPPALAGEKETESNVPLEV--VHAKKRKN---------ETLFKERGAQEDFGEEHTSGIWAPYHDKGKYLTDVEQGTLTEQQKVLLKEHQEAKRRKAEAKSEVDDEMDFDRMVEKKTAHLLPARLKAGQKALEGKSTFCGDQEYDYQGRAWIEPPR--TLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERKCQRVYEGHSGAVRGINFSADGRQFLSCSFDRYIQLWDTETGQTVNSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYSARDKFKINRKKVFKGHQNAGYACQVGFSPNGQYVMSGDGQGKLVFWDWKTTKMIKNLRAHDRGPTMGAIWHPLEPSKVISCGWDGLIKYWD 625          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A7S2S2L8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2L8_9STRA)

HSP 1 Score: 459 bits (1182), Expect = 8.690e-152
Identity = 220/376 (58.51%), Postives = 279/376 (74.20%), Query Frame = 3
Query:  834 EYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGK--AQHDYQGRSWMAPPAGAR-LEEEGED-HQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            E+++  D DRRDERK SHLLP RH+++T++ + +S FHGK   + DYQGRSW+ PP G R L  EG++ H  F PKKCIHR+ GH KGVQAI +FP  GHLLLSAS DGTVKIWDV+  R  RRTY GH+  VRDV F+NDG+ FI+A +DR++R WDTETGQC+ TF NRK+PY  KF+P++ + FL         XXXXXXXXX                    +RFVST+DDKK+L+WE+ IPVP+KYI++P MH++P T LHP G  F  QS++N+I  + ARD+FR+MRKK F+GHVNAGYAC++ +SPNGK++ASGDG+G++++WDW STK  R+ + HDDGPCID  WHPLEPSWVAT GWDG IKLWD
Sbjct:   60 EFDVNADLDRRDERKFSHLLPARHDKNTKAMEPKSVFHGKKGTEVDYQGRSWVEPPLGVRPLSSEGDEIHDSFVPKKCIHRFTGHKKGVQAIRWFPDTGHLLLSASYDGTVKIWDVHNSRSVRRTYTGHSEGVRDVNFTNDGRHFITASFDRYMRYWDTETGQCVSTFCNRKVPYQVKFHPIEQDQFLXXXXXXXXXXXXXXXXXXVQEYNHHIQSVNSVLICDDGKRFVSTADDKKILVWEWGIPVPMKYITDPTMHAVPTTALHPWGQHFTAQSMENEIHVYGARDRFRRMRKKVFRGHVNAGYACQITYSPNGKYMASGDGEGRLFVWDWKSTKQIRRFRAHDDGPCIDAQWHPLEPSWVATCGWDGTIKLWD 435          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A225WFN2_9STRA (Pre-mRNA splicing factor n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFN2_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 5.730e-151
Identity = 278/633 (43.92%), Postives = 356/633 (56.24%), Query Frame = 3
Query:   96 MNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKREL----PVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQ-FGYAVD---CRGDTVGNLAEHGKRQGDTVLTADAGGV--RRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREK--TDFEAGRMTEEQSKFREAWEAEQAKKHREYNM---EEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M  L  Y S D    D+   RS +P R    TS   P VN+AP V  S   +QA+       T  L   + T     Q+ ++ P  E   AP  GP   +  EL    P+ AG       GV+E+  +ED+SF  QYHT +Q     +     +G      A  G+   D ++T     V  RR  KK      ++       +  A  D G+  TD +WAP   + K  TD E   MTE                     +   E D DR  E+K  HLLP R      + + +S F G  ++DYQGR+W+ PP    L+ +  DHQ F PKKCIH++ GHTKGVQAI  FP YGHLLLS SMD TV+IWDV   R  +R Y GH+ AVR + FSNDGKQF+S G+DRF++ WDTETGQ + +FT R++PYC KFYP+DN  F+ G S+N VV                             +RFVSTSDDKK+L+WE+ IPVPIKYISEP MHSMPA TLHPSGGFF GQS++N I  ++ARDKF+  RKK F+GH NAGYAC++ FSPNG++L SGDG+GK+  WDW +TK+ +K + HD GP +   WHPLEPS V + GWDG+IK WD
Sbjct:    1 MEALGAYASSD----DDEVPRSTSP-RSTDSTSLALPLVNSAPFVAVSDNQEQANK------TAFLAAASRT-----QLAVNLP-VESTLAPFVGPHGGNSTELALLDPLRAGSGKEIVTGVVEKADMEDYSFEAQYHTHNQTLSRNIPRNRAKGAPPSAPALPGEILVDDIVTPGEEDVFTRRAAKKRKNQTLSK-------ERAAAEDFGDEMTDGIWAPYKDKNKHWTDAEQETMTEXXXXXXXXXXXXXXXXXXXKQVMDEEMDFDRMVEKKTGHLLPARLKAGQTALEGKSKFMGDQEYDYQGRAWVEPPR--TLKPDDGDHQVFMPKKCIHKWTGHTKGVQAIELFPKYGHLLLSGSMDNTVRIWDVYNERTCQRVYEGHSGAVRAINFSNDGKQFLSCGFDRFIQLWDTETGQTVNSFTTRRVPYCVKFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSMNNHIDVYSARDKFKINRKKVFRGHQNAGYACQIGFSPNGQYLMSGDGEGKLVFWDWKTTKMIKKLRAHDRGPTMGAIWHPLEPSKVVSCGWDGLIKYWD 607          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D0NPR4_PHYIT1.970e-15845.05Pre-mRNA-processing factor, putative n=15 Tax=Phyt... [more]
A0A5D6XJI7_9STRA1.020e-15746.84Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S4A1N7_9STRA1.020e-15646.35Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2D4CLB3_PYTIN1.180e-15643.11Putative pre-mRNA splicing factor n=2 Tax=Pythium ... [more]
A0A8K1CNG0_PYTOL2.000e-15448.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662Y947_9STRA3.840e-15343.40Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
M4BWF7_HYAAE4.320e-15346.92Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VT76_9STRA1.630e-15243.13Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A7S2S2L8_9STRA8.690e-15258.51Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A225WFN2_9STRA5.730e-15143.92Pre-mRNA splicing factor n=1 Tax=Phytophthora mega... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:418543..421925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1015.8
Seed ortholog evalue8.8e-294
Seed eggNOG ortholog2880.D7G098
Preferred nameCDC40
KEGG koko:K12816
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000348,GO:0000350,GO:0000375,GO:0000377,GO:0000389,GO:0000393,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031123,GO:0031124,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0034399,GO:0034613,GO:0034622,GO:0034641,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0045292,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0070727,GO:0071007,GO:0071013,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.mRNA splicing, via spliceosome
EggNOG OGsKOG0282@1,KOG0282@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-14_005040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons4
Model size2392
Cds size1857
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.66.1prot_F-serratus_M_contig10.66.1Fucus serratus malepolypeptideF-serratus_M_contig10 418638..421460 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928783.118992-UTR-F-serratus_M_contig10:418542..4186371622928783.118992-UTR-F-serratus_M_contig10:418542..418637Fucus serratus maleUTRF-serratus_M_contig10 418543..418637 +
1690962568.9367955-UTR-F-serratus_M_contig10:418542..4186371690962568.9367955-UTR-F-serratus_M_contig10:418542..418637Fucus serratus maleUTRF-serratus_M_contig10 418543..418637 +
1622928783.1784172-UTR-F-serratus_M_contig10:421460..4216891622928783.1784172-UTR-F-serratus_M_contig10:421460..421689Fucus serratus maleUTRF-serratus_M_contig10 421461..421689 +
1690962568.9775002-UTR-F-serratus_M_contig10:421460..4216891690962568.9775002-UTR-F-serratus_M_contig10:421460..421689Fucus serratus maleUTRF-serratus_M_contig10 421461..421689 +
1622928783.20571-UTR-F-serratus_M_contig10:421714..4219251622928783.20571-UTR-F-serratus_M_contig10:421714..421925Fucus serratus maleUTRF-serratus_M_contig10 421715..421925 +
1690962568.986627-UTR-F-serratus_M_contig10:421714..4219251690962568.986627-UTR-F-serratus_M_contig10:421714..421925Fucus serratus maleUTRF-serratus_M_contig10 421715..421925 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928783.1320486-CDS-F-serratus_M_contig10:418637..4200741622928783.1320486-CDS-F-serratus_M_contig10:418637..420074Fucus serratus maleCDSF-serratus_M_contig10 418638..420074 +
1690962568.9464116-CDS-F-serratus_M_contig10:418637..4200741690962568.9464116-CDS-F-serratus_M_contig10:418637..420074Fucus serratus maleCDSF-serratus_M_contig10 418638..420074 +
1622928783.1454265-CDS-F-serratus_M_contig10:420661..4209791622928783.1454265-CDS-F-serratus_M_contig10:420661..420979Fucus serratus maleCDSF-serratus_M_contig10 420662..420979 +
1690962568.954172-CDS-F-serratus_M_contig10:420661..4209791690962568.954172-CDS-F-serratus_M_contig10:420661..420979Fucus serratus maleCDSF-serratus_M_contig10 420662..420979 +
1622928783.1611662-CDS-F-serratus_M_contig10:421358..4214601622928783.1611662-CDS-F-serratus_M_contig10:421358..421460Fucus serratus maleCDSF-serratus_M_contig10 421359..421460 +
1690962568.9668994-CDS-F-serratus_M_contig10:421358..4214601690962568.9668994-CDS-F-serratus_M_contig10:421358..421460Fucus serratus maleCDSF-serratus_M_contig10 421359..421460 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig10.66.1

>prot_F-serratus_M_contig10.66.1 ID=prot_F-serratus_M_contig10.66.1|Name=mRNA_F-serratus_M_contig10.66.1|organism=Fucus serratus male|type=polypeptide|length=619bp
MNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRA
MDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPH
KRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTV
GNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADRD
LGETDTDSVWAPEAPREKTDFEAGRMTEEQSKFREAWEAEQAKKHREYNM
EEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPP
AGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMD
GTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWD
TETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGEVVQ
EYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMH
SMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYAC
RMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPL
EPSWVATAGWDGIIKLWD*
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mRNA from alignment at F-serratus_M_contig10:418543..421925+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig10.66.1 ID=mRNA_F-serratus_M_contig10.66.1|Name=mRNA_F-serratus_M_contig10.66.1|organism=Fucus serratus male|type=mRNA|length=3383bp|location=Sequence derived from alignment at F-serratus_M_contig10:418543..421925+ (Fucus serratus male)
GCAACCGCTGGGTGCGTCCTCTCGCTGTCCCGATCTCAGTGTTGTAGTCT GACATTGTATCGTGATAATTAATCCAGTAGTCTCGTGAAGTCACAATGAA CCTTTTGGCAGGATACGGCAGTGGCGACGAGAACTCATCCGATGAGGGCG GTGCAAGATCGGCAGCGCCTGCTCGGAAACAGACCATTACATCTTTCCGG GCGCCGCGTGTGAACGCAGCACCTCACGTGGTCGCATCTAGAGCGATGGA CCAGGCTTCGTCTTCCCTTATGGCCCCACCGACGGGGATGCTGGGTCTTA AGAATAGTACTCCGAAGGTGGGAGGTCAAATTATGATCCACAACCCCAAG GCCGAGCACTTCCGCGCACCTGTGCAAGGCCCAGCACACCCGCACAAGCG AGAGCTGCCCGTCCCGGCCGGTGGGCGCGCCACGGGTACCGGCGGCGTGA TCGAGCAGACCTCTCTAGAAGATTGGTCCTTCCATGAGCAGTACCACACC TTCCACCAGTTCGGCTACGCGGTGGACTGTCGGGGCGACACCGTCGGCAA CCTTGCCGAGCACGGGAAGCGTCAGGGGGACACGGTTCTCACAGCGGACG CCGGAGGCGTGCGACGCAAGCGGAAGAAGAGCGGCGGGGACGGGGCAAAT GAGGGTGGCGATGTCGGCGACGGAAAGGAGGATGCTGATCGAGATCTTGG TGAAACAGACACGGACAGCGTGTGGGCTCCGGAGGCACCGAGGGAAAAAA CGGACTTCGAGGCAGGCAGGATGACCGAAGAGCAATCAAAATTCCGAGAG GCTTGGGAGGCGGAGCAGGCAAAGAAGCACCGCGAGTACAACATGGAGGA GGACCACGACAGACGAGACGAACGCAAAATCTCGCACCTTCTTCCGCCGA GGCACAACCGGGACACGGAGTCCAAGAAGGCGCGGTCTACATTCCACGGA AAGGCGCAGCACGACTACCAGGGGAGGTCGTGGATGGCGCCGCCTGCCGG AGCAAGGCTTGAGGAGGAAGGGGAAGACCACCAGTGCTTCACGCCCAAGA AGTGCATCCATCGGTACGCAGGGCACACGAAAGGAGTGCAGGCGATCTCG TTCTTCCCGGGGTATGGGCACTTGCTTCTTTCAGCGAGCATGGATGGCAC GGTGAAGATCTGGGACGTGAACGGGGGGAGAGGGCAGCGGCGGACGTACA TAGGGCACACAGCGGCCGTGCGGGACGTGCAGTTTAGCAACGACGGAAAG CAGTTCATCAGCGCCGGATACGACCGCTTCGTGCGGCAATGGGACACGGA GACGGGGCAGTGCCTGGGGACGTTCACTAACCGTAAGATGCCTTACTGCG CCAAGTTCTACCCGGTCGACAACAACATATTCTTGTGCGGTTGCTCGGAC AACCGCGTCGTGCAATACGACGCCCGTTCCGGGGAGGTTGTACAGGAATA CAATCACCACCTGGGACCCGTCAACACGGTGCTCTTTGTGGATGACAACC AGCGCTTTGTCAGCACTTCCGACGACAAAAAGGTGCGCACGAGGCGTGGG GGTCGTTACTGTTGTGCCGTGTGTTAGTCTATGACGCGCATTCTGGGCGC TCGGGGGAACGACACGCTGTAGTCGCTGCCCGACCCCGAAAGACACATGG ACATCCATACCGGTATTCGTTCTGTACAACTGCTTTTGCTGTTCTACTAT GATATGAACAATCTTGGTTGCTTAGAGAGTGACAAGGGTTGTTGGCGGCG TCTTCCCTTTGCATAAGATTGACATACGCTTCTAATGACGGGTGCCCCGG CACCGGAGAAGCGAACGTTTGGCGTCGCATTGAGTCGGTCGTCGAGAGAT ATATTTATTTGCGTGTTTTGTATCCCGTGCATTTTCATTACGTTTTTCGA CCATAGCAAAACCCCAATGCCCTCTCGTCTCCTCTCCTTTGCTTCCCCCG TTCGAATTCGTGCGGGAGAACCACCGCATTTCACTCCTTACTTAGTCTTT TATTATTCCCTTGCTCTCGCCTCCCCTTTCCCGCCGCTCTCATGTGTGGG ACTCTCTTTCCCTCTCTTTCCCGCTGTCGGACCCCGATGACCCGGCCCCA CGCCGTCCACCCGACGCAGGTGTTGATTTGGGAGTACAACATCCCCGTGC CCATCAAGTACATCTCGGAGCCGGACATGCACTCAATGCCGGCGACGACT CTCCATCCTTCGGGAGGTTTCTTCGTGGGACAGTCCCTTGACAATAAGAT CGTCACGTGGACGGCCCGGGACAAATTCAGGCAGATGCGGAAGAAGGAGT TCAAGGGCCACGTGAACGCGGGCTACGCCTGCCGCATGGCCTTCAGCCCG AACGGAAAGTTCTTGGCGTCCGGGGACGGGCAGGGGAAGATGTACATTTG GGACTGGGGGAGCACCAAGGTCTACCGTAAGCATCAGGTAAGAGAGCACG TTGAGCGACCCAACCTCTATATACCCCAAGCGGGTTGGAACATTTTTGTT TGTGGTTTGTTCTTCTCCGAAGGGGGCATGTACTGTTAAAAGGGTAAAGA GCGCGCATCCTAACTCAAGGTAGAGCAACAAATTGTGCCCGGACTGCTGC CCAAGTGACATAAGATAAGTGCCTGACGCGCGCGTGGAGTTGTGGGCGCT TTCTTCCCATCTTCAGGTGCCTGCTCGCCGCCGCTACGTGCACCGATCAC CGGTTCAGCGCTTTGTGAAATGATGGATTCGCCTGCTCTCGGCACGTTCT GTGTTTCATTTTTCGCCCCCCCCCCCCCCCTTTTTCCCTCACACTGTTTG GCCCACCGTACATCAGTGCCACGACGACGGCCCCTGTATCGACATTGCAT GGCATCCCCTGGAGCCGAGCTGGGTTGCAACAGCGGGCTGGGACGGAATT ATAAAGCTCTGGGACTAGCGGGGATGGACGCGTGAGACCCGAGGTGCTTT CTAGAGTCCGCCGGACTCTGCATTTGTAAGAAGAGGGCGACTGAATTTTG TGTATCCCACTATTAATAGTTTGGCTGAATGGCCACCGAGGCGTGTGTAC CCTAGGCGGTCAAATTCTCTGTAGTCACGTTGTCAGGGGATACTCTCTAA GCGGTTGTGTCCTGAGGATAATGTGGCAAGTGACAGGGGAACTCTAAGCG GTTGTGACAGGGGAACTCTAAGCGGTTTTGTCCTGAGGATAATGCGGCAA GTGATAGGGGAGTTCACCTCCAACATCGGGACGTTGGGCTTAGCATCCCC TGTCGAGTTTTTCCGAAGCAGCGGGGGCACGGACGTTTCAGGGCGTAGTT CTAGAAGGACTTCAAAGGACCTTCCGCAAACGGCAACGTTTATTGGTCTA TCAGAGTCATAGTTGTCGTTAATGCGAGATGGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig10:418543..421925+

>mRNA_F-serratus_M_contig10.66.1 ID=mRNA_F-serratus_M_contig10.66.1|Name=mRNA_F-serratus_M_contig10.66.1|organism=Fucus serratus male|type=CDS|length=3714bp|location=Sequence derived from alignment at F-serratus_M_contig10:418543..421925+ (Fucus serratus male)
ATGAACCTTTTGGCAGGATACGGCAGTGGCGACGAGAACTCATCCGATGA
GGGCGGTGCAAGATCGGCAGCGCCTGCTCGGAAACAGACCATTACATCTT
TCCGGGCGCCGCGTGTGAACGCAGCACCTCACGTGGTCGCATCTAGAGCG
ATGGACCAGGCTTCGTCTTCCCTTATGGCCCCACCGACGGGGATGCTGGG
TCTTAAGAATAGTACTCCGAAGGTGGGAGGTCAAATTATGATCCACAACC
CCAAGGCCGAGCACTTCCGCGCACCTGTGCAAGGCCCAGCACACCCGCAC
AAGCGAGAGCTGCCCGTCCCGGCCGGTGGGCGCGCCACGGGTACCGGCGG
CGTGATCGAGCAGACCTCTCTAGAAGATTGGTCCTTCCATGAGCAGTACC
ACACCTTCCACCAGTTCGGCTACGCGGTGGACTGTCGGGGCGACACCGTC
GGCAACCTTGCCGAGCACGGGAAGCGTCAGGGGGACACGGTTCTCACAGC
GGACGCCGGAGGCGTGCGACGCAAGCGGAAGAAGAGCGGCGGGGACGGGG
CAAATGAGGGTGGCGATGTCGGCGACGGAAAGGAGGATGCTGATCGAGAT
CTTGGTGAAACAGACACGGACAGCGTGTGGGCTCCGGAGGCACCGAGGGA
AAAAACGGACTTCGAGGCAGGCAGGATGACCGAAGAGCAATCAAAATTCC
GAGAGGCTTGGGAGGCGGAGCAGGCAAAGAAGCACCGCGAGTACAACATG
GAGGAGGACCACGACAGACGAGACGAACGCAAAATCTCGCACCTTCTTCC
GCCGAGGCACAACCGGGACACGGAGTCCAAGAAGGCGCGGTCTACATTCC
ACGGAAAGGCGCAGCACGACTACCAGGGGAGGTCGTGGATGGCGCCGCCT
GCCGGAGCAAGGCTTGAGGAGGAAGGGGAAGACCACCAGTGCTTCACGCC
CAAGAAGTGCATCCATCGGTACGCAGGGCACACGAAAGGAGTGCAGGCGA
TCTCGTTCTTCCCGGGGTATGGGCACTTGCTTCTTTCAGCGAGCATGGAT
GGCACGGTGAAGATCTGGGACGTGAACGGGGGGAGAGGGCAGCGGCGGAC
GTACATAGGGCACACAGCGGCCGTGCGGGACGTGCAGTTTAGCAACGACG
GAAAGCAGTTCATCAGCGCCGGATACGACCGCTTCGTGCGGCAATGGGAC
ACGGAGACGGGGCAGTGCCTGGGGACGTTCACTAACCGTAAGATGCCTTA
CTGCGCCAAGTTCTACCCGGTCGACAACAACATATTCTTGTGCGGTTGCT
CGGACAACCGCGTCGTGCAATACGACGCCCGTTCCGGGGAGGTTGTACAG
GAATACAATCACCACCTGGGACCCGTCAACACGGTGCTCTTTGTGGATGA
CAACCAGCGCTTTGTCAGCACTTCCGACGACAAAAAGATGAACCTTTTGG
CAGGATACGGCAGTGGCGACGAGAACTCATCCGATGAGGGCGGTGCAAGA
TCGGCAGCGCCTGCTCGGAAACAGACCATTACATCTTTCCGGGCGCCGCG
TGTGAACGCAGCACCTCACGTGGTCGCATCTAGAGCGATGGACCAGGCTT
CGTCTTCCCTTATGGCCCCACCGACGGGGATGCTGGGTCTTAAGAATAGT
ACTCCGAAGGTGGGAGGTCAAATTATGATCCACAACCCCAAGGCCGAGCA
CTTCCGCGCACCTGTGCAAGGCCCAGCACACCCGCACAAGCGAGAGCTGC
CCGTCCCGGCCGGTGGGCGCGCCACGGGTACCGGCGGCGTGATCGAGCAG
ACCTCTCTAGAAGATTGGTCCTTCCATGAGCAGTACCACACCTTCCACCA
GTTCGGCTACGCGGTGGACTGTCGGGGCGACACCGTCGGCAACCTTGCCG
AGCACGGGAAGCGTCAGGGGGACACGGTTCTCACAGCGGACGCCGGAGGC
GTGCGACGCAAGCGGAAGAAGAGCGGCGGGGACGGGGCAAATGAGGGTGG
CGATGTCGGCGACGGAAAGGAGGATGCTGATCGAGATCTTGGTGAAACAG
ACACGGACAGCGTGTGGGCTCCGGAGGCACCGAGGGAAAAAACGGACTTC
GAGGCAGGCAGGATGACCGAAGAGCAATCAAAATTCCGAGAGGCTTGGGA
GGCGGAGCAGGCAAAGAAGCACCGCGAGTACAACATGGAGGAGGACCACG
ACAGACGAGACGAACGCAAAATCTCGCACCTTCTTCCGCCGAGGCACAAC
CGGGACACGGAGTCCAAGAAGGCGCGGTCTACATTCCACGGAAAGGCGCA
GCACGACTACCAGGGGAGGTCGTGGATGGCGCCGCCTGCCGGAGCAAGGC
TTGAGGAGGAAGGGGAAGACCACCAGTGCTTCACGCCCAAGAAGTGCATC
CATCGGTACGCAGGGCACACGAAAGGAGTGCAGGCGATCTCGTTCTTCCC
GGGGTATGGGCACTTGCTTCTTTCAGCGAGCATGGATGGCACGGTGAAGA
TCTGGGACGTGAACGGGGGGAGAGGGCAGCGGCGGACGTACATAGGGCAC
ACAGCGGCCGTGCGGGACGTGCAGTTTAGCAACGACGGAAAGCAGTTCAT
CAGCGCCGGATACGACCGCTTCGTGCGGCAATGGGACACGGAGACGGGGC
AGTGCCTGGGGACGTTCACTAACCGTAAGATGCCTTACTGCGCCAAGTTC
TACCCGGTCGACAACAACATATTCTTGTGCGGTTGCTCGGACAACCGCGT
CGTGCAATACGACGCCCGTTCCGGGGAGGTTGTACAGGAATACAATCACC
ACCTGGGACCCGTCAACACGGTGCTCTTTGTGGATGACAACCAGCGCTTT
GTCAGCACTTCCGACGACAAAAAGGTGTTGATTTGGGAGTACAACATCCC
CGTGCCCATCAAGTACATCTCGGAGCCGGACATGCACTCAATGCCGGCGA
CGACTCTCCATCCTTCGGGAGGTTTCTTCGTGGGACAGTCCCTTGACAAT
AAGATCGTCACGTGGACGGCCCGGGACAAATTCAGGCAGATGCGGAAGAA
GGAGTTCAAGGGCCACGTGAACGCGGGCTACGCCTGCCGCATGGCCTTCA
GCCCGAACGGAAAGTTCTTGGCGTCCGGGGACGGGCAGGGGAAGATGTAC
ATTTGGGACTGGGGGAGCACCAAGGTCTACCGTAAGCATCAGGTGTTGAT
TTGGGAGTACAACATCCCCGTGCCCATCAAGTACATCTCGGAGCCGGACA
TGCACTCAATGCCGGCGACGACTCTCCATCCTTCGGGAGGTTTCTTCGTG
GGACAGTCCCTTGACAATAAGATCGTCACGTGGACGGCCCGGGACAAATT
CAGGCAGATGCGGAAGAAGGAGTTCAAGGGCCACGTGAACGCGGGCTACG
CCTGCCGCATGGCCTTCAGCCCGAACGGAAAGTTCTTGGCGTCCGGGGAC
GGGCAGGGGAAGATGTACATTTGGGACTGGGGGAGCACCAAGGTCTACCG
TAAGCATCAGTGCCACGACGACGGCCCCTGTATCGACATTGCATGGCATC
CCCTGGAGCCGAGCTGGGTTGCAACAGCGGGCTGGGACGGAATTATAAAG
CTCTGGGACTAGTGCCACGACGACGGCCCCTGTATCGACATTGCATGGCA
TCCCCTGGAGCCGAGCTGGGTTGCAACAGCGGGCTGGGACGGAATTATAA
AGCTCTGGGACTAG
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