mRNA_F-serratus_M_contig10.66.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig10.66.1
Unique NamemRNA_F-serratus_M_contig10.66.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: D7G098_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G098_ECTSI)

HSP 1 Score: 1006 bits (2601), Expect = 0.000e+0
Identity = 501/625 (80.16%), Postives = 538/625 (86.08%), Query Frame = 3
Query:   96 MNLLAGYGSGDE-NSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRR-KRKKSGGDGANEGGDV-GDGK-EDADRDLGETDTDSVWAPEAPREKTDFEAGRMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGAR-LEEEGED-HQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            MNL+AGYGS D+ NSSD GG    A    +   +FRAPRVNAAP+V+ S AM QA+ SLM+ P G LGLK S+ K GGQIMIHNPKAEHF APVQGPAHPH+R+LPVPAGGRATGTGGVIEQ SLE+WSFHEQYHTFHQFGYAVD RGDTVGNL+EH KRQGDTVL+A+ GG+RR KRKK  G G        G+GK E+   DLG++D D VWAPE PREKTDFEAG MT EQ+KFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESK ARSTFHGKAQHDYQGRSWMAPPAGAR +E+EGED H+CFTPKKCIHRY GHTKGVQAISFFPGYGHLLLSASMDG+VKIWDVNGGRGQRRTY GH+AAVRD+QFSNDGKQF+SAGYDRF+RQWDTETGQC+ TFTNRKMPYCAK+YPVDNN+FLCGCSDNRVV                              QRFVSTSDDKKVLIWEYNIPVPIKYI+EPDMHSMPATTLHP+GGFFVGQSLDNKIVTWTARDKFRQM+KKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRK QCHDDGPCID+AWHPLEPSWVATAGWDG+IKLWD
Sbjct:    1 MNLVAGYGSSDDANSSDGGGGSGPASKAARPKATFRAPRVNAAPNVLVSGAMAQATDSLMSSPLGRLGLKPSS-KTGGQIMIHNPKAEHFLAPVQGPAHPHRRDLPVPAGGRATGTGGVIEQASLEEWSFHEQYHTFHQFGYAVDSRGDTVGNLSEHSKRQGDTVLSAEVGGLRRNKRKKQAGAGXXXXXXXXGEGKGEERGGDLGDSDNDGVWAPEVPREKTDFEAGTMTAEQTKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKTARSTFHGKAQHDYQGRSWMAPPAGARSVEDEGEDVHKCFTPKKCIHRYTGHTKGVQAISFFPGYGHLLLSASMDGSVKIWDVNGGRGQRRTYQGHSAAVRDIQFSNDGKQFLSAGYDRFIRQWDTETGQCIATFTNRKMPYCAKYYPVDNNMFLCGCSDNRVVQYDARNGSEIVQEYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYIAEPDMHSMPATTLHPTGGFFVGQSLDNKIVTWTARDKFRQMKKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKLQCHDDGPCIDVAWHPLEPSWVATAGWDGVIKLWD 624          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A836CBI0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI0_9STRA)

HSP 1 Score: 598 bits (1542), Expect = 2.120e-203
Identity = 357/629 (56.76%), Postives = 424/629 (67.41%), Query Frame = 3
Query:   96 MNLLAGYGSGDENSSDEGGARSAAPARKQTIT---SFRAPRVNAAPHVVASRAMDQASS-----SLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKR-ELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREKT--DFEAGRMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M+LL GY SG  + +DE G+ +       ++      +   V AAP V+  RA + A S     S  A P G L     T +  GQ+M++NPKA+   APV GPAHP +  ++ VP GG  TG G V+E+ S+EDWSF EQYHTF Q  Y +   GD VG++A+        +    AG  +R+                 G  D    +G+  T  +WAP+    +   D EAG MTE Q+ FREA+ AE+AKK REYNMEEDHDRRDERK+ HLLPPRH+RDT + +A++TFHGK + DY+G+SW+ PP G R      DHQ F PKKCIHR+ GHTKGVQAI FFPG+GHL+LS SMDG  K+WDV G R  RRTY GH+AAVRDV+FSNDG++F+SAGYDRFVR WDTETGQC+ TFTNRKMPY   FYP                XXXXXXXXXXXXXXXXXXXXXXXXXXXXX               EY IPVPIKYISEP MHSMPA  LHPSG ++VGQSLDN+I+ W ARDKFRQ RKK FKGH NAGYACRM FSPNGK+LASGDG+G++++WDWGSTKVYRK   H DGPCID+ WHP E SWVATAGWDGIIKLWD
Sbjct:    1 MDLLQGYASG--SGADESGSEAQEEQPMVSVNLKPQLQTRAVVAAPTVI--RAPEHAKSVVNPLSAAAGPVGQL----QTARAPGQMMMYNPKADLLLAPVLGPAHPFRASKMEVPVGGSHTGAG-VVERASIEDWSFQEQYHTFQQHKYTIGVSGDMVGDVAKG-------LAVEQAGPPQREXXXXXXXXXXXXXXXXTGITD----VGDEVTTGIWAPQEDETRVVPDAEAGTMTEAQAAFREAYLAEKAKKQREYNMEEDHDRRDERKMGHLLPPRHDRDTTAAEAKTTFHGKKEADYKGKSWVEPPGGHRAGVG--DHQAFPPKKCIHRWTGHTKGVQAIEFFPGFGHLILSGSMDGKCKVWDVLGDRQARRTYSGHSAAVRDVKFSNDGRRFLSAGYDRFVRLWDTETGQCVRTFTNRKMPYTVTFYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYGIPVPIKYISEPHMHSMPAVALHPSGNYWVGQSLDNQILAWGARDKFRQNRKKIFKGHTNAGYACRMDFSPNGKYLASGDGEGRLFVWDWGSTKVYRKLAAHTDGPCIDVKWHPTEASWVATAGWDGIIKLWD 607          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A7S2Y0E0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E0_9STRA)

HSP 1 Score: 553 bits (1426), Expect = 2.470e-185
Identity = 296/595 (49.75%), Postives = 370/595 (62.18%), Query Frame = 3
Query:  285 GMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLA-----------------EHGKRQG-------DTVLTADAGG---------VRRKR-------KKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREKTDFEAGRMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            G L ++NS      Q ++ NPKA    AP  GPAHP+K+E+ +PA GR   TG V+E   +EDW+F +QYHTF  FGYA D +G  VGN +                 E  K+QG       D  ++A  G           RRKR       KK   + A    D GDG+E       + +  ++        +TDFE G +TEEQ KFR+ WEA Q  KH+EY+M+EDHDRRDERKISHL+PPRH+R T +  + + FHG+ + DYQGRSW+ PP G +  +    H+ F PK+CIHR+ GHTKGV  I FFPG+GHLLLS SMD  +KIWDV   R  +RTY GH+  VRDV+F+ DG QF             TETGQ LGTFTNRK+PYC ++YPVD NIFL G S N+VV                             +RFVSTSDDKK+LIWEYNIPVPIKYISEP MHSMP TTLHPSG FF GQS++N+I  + ARD+F+ MRKK FKGHVNAGYA R++FSPNGK++  GD +GK ++WDWGS ++Y+K   H++ P     WHP+E SWVAT GWDG+IKLWD
Sbjct:   66 GTLVVQNS------QKLVINPKAAAITAPTYGPAHPYKQEMALPAHGREMPTG-VLEPAGVEDWAFQQQYHTFANFGYAHDDQGKVVGNESGPWRVHSALQAAVKGKKEDTKKQGGGEEVLPDAQMSAFTGSDKQLRRQLKKRRKRERALQEIKKRAREAAE---DHGDGEEGGGASEAKGEGKTIEEELYGGPQTDFEKGTITEEQLKFRQEWEAAQKLKHKEYDMDEDHDRRDERKISHLMPPRHDRHTTAPDSSTKFHGRQEVDYQGRSWVKPPRGHKAGDG--THKAFPPKRCIHRWTGHTKGVNHIEFFPGHGHLLLSCSMDAKIKIWDVLEDRQVKRTYQGHSMGVRDVRFNADGSQFXXXXXXXXXXXXXTETGQVLGTFTNRKVPYCVRYYPVDENIFLVGSSCNKVVQWDARANEIVQEYNHHLGPVNTVLFAEDNRRFVSTSDDKKILIWEYNIPVPIKYISEPSMHSMPTTTLHPSGNFFAGQSMNNEIHVYAARDRFKFMRKKLFKGHVNAGYANRISFSPNGKYICCGDAEGKFFVWDWGSRRIYKKFLAHENNPVTSCDWHPVESSWVATCGWDGVIKLWD 648          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: W7TQP6_9STRA (Pre-mrna-processing factor 17 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP6_9STRA)

HSP 1 Score: 526 bits (1354), Expect = 5.000e-175
Identity = 278/556 (50.00%), Postives = 352/556 (63.31%), Query Frame = 3
Query:  342 NPKAEHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVD-CRGDTVGNLAEHGKRQG------DTVLTAD-----AGGV------RRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREK--TDFEAGRMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            N KA    AP+QGP HP +RE+    GG    TGG  E   +E W+FHEQ+HTFH  GYA D   G  +GN+  + +++G       T + A      +G        RRKRK               G E+ D DLGE + D  WAP A  E   T  EAG +TEEQ + R      +A KHR Y+ +ED DRRDERK++HLLPPRH+RDT + +  + FHGK + DYQGRSW+ PP G R  E   DH C+ PK+C+HRY GH KGVQAI FFPG GHLLLSAS+DGT K+W V   R  RRTY GHTAAVR + FS DG +F+S G+DRF+R WDTETGQC+ T TNRK+PY AKFYP ++N+F+   SDNR+                               RF STSDDKK+L+WE++I VPIKYI+EP MHSMPA T  P+G F   QSLDN I  +  RD+F+ + KK FKGH  AG+AC+ AFSPN ++LASGDG+GK++ WD+ +T+   K++ HD+GPCI + WHP+E S VA+ GWDG+IKLW+
Sbjct:   78 NVKAATLLAPIQGPEHPFRREMDS-MGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKEGLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRK---------------GVEE-DEDLGEEE-DGPWAP-AKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVET--DHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKLWE 612          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: A0A7S2WI16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI16_9STRA)

HSP 1 Score: 514 bits (1324), Expect = 1.650e-170
Identity = 273/555 (49.19%), Postives = 361/555 (65.05%), Query Frame = 3
Query:  312 PKVGGQIMIHNPKAEHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADR--DLGETDTDSVWAPEAPREKTDFEAGRMTEEQSKFREAWEAEQAKKHR---EYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGK--AQHDYQGRSWMAPPAGAR-LEEEGED-HQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            PK   + + +N K E   AP  GP HP + +  +P  G A    G I  T+++ W+F EQ+HT++ +GYA+D RG  VG+   +  +QGD+V T      +R  KK+      E   +   + +A R  DLG              E  D +A  + E ++K     E    KK +   E+++  D DRRDERK SHLLP RH+++T++ + +S FHGK   + DYQGRSW+ PP G R L  EG++ H  F PKKCIHR+ GH KGVQAI +FP  GHLLLSAS DGTVKIWDV+  R  RRTY GH+  VRDV F+NDG+ FI+A +DR++R WDTETGQC+ TF NRK+PY  KF+P++ + FL         XXXXXXXXX                    +RFVST+DDKK+L+WE+ IPVP+KYI++P MH++P T LHP G  F  QS++N+I  + ARD+FR+MRKK F+GHVNAGYAC++ +SPNGK++ASGDG+G++++WDW STK  R+ + HDDGPCID  WHPLEPSWVAT GWDG IKLWD
Sbjct:   65 PKKAAKGLRYNAKKEVLMAPSAGPKHPFRTQAFMPHLGAAAHANGYIAPTNVDQWAFEEQFHTYNSYGYAMDTRGQVVGDSGAYRDQQGDSVSTMKPAKRKRSGKKA------EDPILKAARAEAAREFDLGSGGGSGGLGGGPWAEHRDEDAELLEEIEAKNHARMEEAAEKKKKAEDEFDVNADLDRRDERKFSHLLPARHDKNTKAMEPKSVFHGKKGTEVDYQGRSWVEPPLGVRPLSSEGDEIHDSFVPKKCIHRFTGHKKGVQAIRWFPDTGHLLLSASYDGTVKIWDVHNSRSVRRTYTGHSEGVRDVNFTNDGRHFITASFDRYMRYWDTETGQCVSTFCNRKVPYQVKFHPIEQDQFLXXXXXXXXXXXXXXXXXXVQEYNHHIQSVNSVLICDDGKRFVSTADDKKILVWEWGIPVPMKYITDPTMHAVPTTALHPWGQHFTAQSMENEIHVYGARDRFRRMRKKVFRGHVNAGYACQITYSPNGKYMASGDGEGRLFVWDWKSTKQIRRFRAHDDGPCIDAQWHPLEPSWVATCGWDGTIKLWD 613          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: K8Z4U6_NANGC (Pre-mRNA-processing factor 17 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4U6_NANGC)

HSP 1 Score: 520 bits (1338), Expect = 3.410e-170
Identity = 276/554 (49.82%), Postives = 349/554 (63.00%), Query Frame = 3
Query:  342 NPKAEHFRAPVQGPAHPHKRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVD-CRGDTVGNLAEHGKRQ------GDTVLTAD-----AGGV------RRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREK--TDFEAGRMTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKL 1943
            N KA    AP+QGP HP +RE+    GG    TGG  E   +E W+FHEQ+HTFH  GYA D   G  +GN+  + +++      G T + A      +G        RRKRK               G E+ D DLGE + D  WAP A  E   T  EAG +TEEQ + R      +A KHR Y+ +ED DRRDERK++HLLPPRH+RDT + +  + FHGK + DYQGRSW+ PP G R  E   DH C+ PK+C+HRY GH KGVQAI FFPG GHLLLSAS+DGT K+W V   R  RRTY GHTAAVR + FS DG +F+S G+DRF+R WDTETGQC+ T TNRK+PY AKFYP ++N+F+   SDNR+                               RF STSDDKK+L+WE++I VPIKYI+EP MHSMPA T  P+G F   QSLDN I  +  RD+F+ + KK FKGH  AG+AC+ AFSPN ++LASGDG+GK++ WD+ +T+   K++ HD+GPCI + WHP+E S VA+ GWDG+IK 
Sbjct:   78 NVKAATLLAPIQGPEHPFRREMDS-MGGTKLATGGYKEDAVMEKWNFHEQFHTFHAQGYARDDVAGGIIGNVHNYMRKECLRDPAGPTAINAGRVTKPSGSTALEPVSRRKRK---------------GVEE-DEDLGEEE-DGPWAP-AKEEPVITQLEAGTLTEEQKRHRAELAERKAAKHRGYDEDEDLDRRDERKVAHLLPPRHDRDTVASEPTTQFHGKGESDYQGRSWVEPPGGLRPVET--DHACYLPKRCVHRYTGHGKGVQAIEFFPGTGHLLLSASLDGTCKVWSVYDERQLRRTYSGHTAAVRCINFSPDGSRFLSGGFDRFLRLWDTETGQCISTITNRKVPYAAKFYPPNDNLFIFAASDNRLYTYDWSSGEMVQEYNHHLSAVNTVTFYDNNSRFASTSDDKKMLLWEWDISVPIKYIAEPGMHSMPAVTPSPAGDFVACQSLDNTIKIFGCRDRFKLLHKKVFKGHTIAGFACQPAFSPNNRYLASGDGEGKLHFWDFKNTRALAKYRAHDNGPCIGLVWHPVEASMVASCGWDGLIKF 610          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: F0Y5V9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5V9_AURAN)

HSP 1 Score: 498 bits (1281), Expect = 6.990e-166
Identity = 262/506 (51.78%), Postives = 315/506 (62.25%), Query Frame = 3
Query:  441 GGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREKTDFEAGR-MTEEQSKFREAWEAEQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFT-NRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            GG +E+ ++E+WSF EQYHTF  FGYA D  G          K  GD    ADA   R KRK+ G                 D  LG  D   VWAPE   E  D +A   +   +++  EA  A+     R Y+  ED DRRDERKISHLLP RH+RDT + +A+  FHG A  DYQGRSW  P  G    +  +DH CF PK+C+H++ GH KGVQ I   P YGHL+LSASMDG+ KIWDV   R    TY GH  AVRD  FS+DG  F + G+DRF R WDTETG  L T T NRKM YC  FYP D+ I L G SDNR+                               +RFVST+DDKK+ IWE+NIPVP+KYISEP M+++P   LHPS  F+ GQSLDN IVT+ ARDK +QMRKK FKGH+N+GY+C + FSPNGKF+ASGDG+GK++ WD+ +T+VYRK Q HD GPCI  AWHPLEPSWV T GWDG+IKLWD
Sbjct:   11 GGSVERAAIEEWSFDEQYHTFQSFGYAQDAAGGQ--------KLVGDGAA-ADAPRPRAKRKRGG-----------------DAPLGTEDEHGVWAPEP--EHIDEDAPEDLAARKAEIAEAV-AKPKSATRAYDQNEDFDRRDERKISHLLPARHDRDTTAIEAKHAFHGDAMRDYQGRSWTRPNLGELRPKVDDDHDCFIPKRCVHKFTGHGKGVQCIKLHPTYGHLMLSASMDGSAKIWDVYNDRRCLMTYAGHAEAVRDATFSHDGSTFATCGFDRFTRVWDTETGAALHTLTPNRKMCYCVDFYPRDDKILLAGASDNRIYQWDLRANEEIVQEYNHHLQPVNSITFIDDDRRFVSTADDKKIFIWEHNIPVPMKYISEPHMNAVPVVELHPSTNFWCGQSLDNTIVTYGARDKLKQMRKKTFKGHLNSGYSCGITFSPNGKFIASGDGEGKLFFWDFKTTRVYRKLQAHDSGPCIGCAWHPLEPSWVFTCGWDGLIKLWD 487          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: K3WD12_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD12_GLOUD)

HSP 1 Score: 490 bits (1261), Expect = 3.140e-161
Identity = 279/634 (44.01%), Postives = 379/634 (59.78%), Query Frame = 3
Query:   96 MNLLAGYGSGDENSSDEGGARSAAPARKQTI--TSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKREL---PVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQF--GYAVDCRG-----DTVGNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREK-TDFEAGRMTEEQSKFREAWEA---EQAKKHREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M  L  Y S D    DE    +A+P+++Q    ++   P +N+AP VV +      S+S          L  ++ K   Q+ ++ P  E   AP  GPA+ + R     P   G       G++E+T++ED++F  QYHT++Q   G  ++ R       T   +  H +   + V T      R  +K+     A E        + A  + G+   D +WAP   +   TD EAG MT EQ   R+A  A   ++A++  +++ E D DR  E+K++HLLP R     E+  A++ F    ++DYQGRSW+ PP G R  +EG DHQ F PK+C+H++ GHTKGVQAI  FP YGHLLLS SMD TV+IWDV   +  +R Y GH+ AVR + FSNDGKQF+S G+DRF++ WDTETGQ + +FTNR++PYC KFYP DNN F+ G S+N +V                             +RFVSTSDDKK+LIWE+ IPVP+KYISEP MHSMPA TLHPSG FF GQSL+N+I  +TARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGD +G++  WDW STK+Y+K + HD GPC+   WHP+EPS V + GWDG+IK WD
Sbjct:    1 MEHLVQYTSSD----DEADVVTASPSKQQQPQGSTVSLPVINSAPLVVVANPEIARSTSQF--------LAAASQK---QLSVNLP-VESTLAPYVGPANAYARNAQLDPAYVGSGKEIVTGIVEKTNMEDFNFDAQYHTYNQSHTGMYLNKRSAPETSQTSDAIVSHNE---ENVFT-----TRNVKKRKNHTVAKE--------KAAAEEFGDDSVDGIWAPYMEKSVVTDAEAGTMTAEQEAIRDAHIAAKKQKAERSTQFDEEMDFDRMIEKKMAHLLPARLKAGQEAMVAKTQFLDTQEYDYQGRSWIEPPRGLR-PDEGGDHQVFLPKRCVHKWTGHTKGVQAIELFPSYGHLLLSGSMDHTVRIWDVYNEKKCKRVYEGHSGAVRGINFSNDGKQFLSCGFDRFIQLWDTETGQSIKSFTNRRVPYCVKFYPGDNNNFVIGDSNNMIVQFDARSGEIVQEYNHHLQAVNSVTFVDDNRRFVSTSDDKKILIWEWGIPVPVKYISEPSMHSMPAVTLHPSGAFFAGQSLNNQIDVYTARDKFKLQRKKVFKGHSNAGYACQIGFSPNGQYIMSGDAEGRLCFWDWKSTKMYKKLRAHDRGPCMGALWHPIEPSKVVSCGWDGLIKYWD 601          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: G4Z505_PHYSP (Putative pre-mRNA splicing factor n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z505_PHYSP)

HSP 1 Score: 486 bits (1250), Expect = 1.690e-159
Identity = 282/638 (44.20%), Postives = 366/638 (57.37%), Query Frame = 3
Query:   96 MNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKREL----PVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNL----AEHGKRQGDTVLTADAGGV-----RRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAPEAPREKT--DFEAGRMTEEQSKFREAWEAEQAKKHREYNMEE-----DHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M  L  Y S DE    E  +RS +P R     S   P VN+AP V  +   ++A+ +              T     Q+ ++ P  E   AP  GP      +L    P+ AG       GV+EQ  +ED+SF  QYHT++Q       R    G      A  G++  DT++      V      +KRK            V   +  A  D G+  TD +WAP   + KT  D E G MTE+Q   RE  E ++AK+ +    EE     D DR  E+K  HLLP R      + + +STF G  ++DYQGR+W+ PP    L+ +  DHQ F PK+C+H++ GHTKGVQAI  FP YGHLLLS SMD TV+IWDV   R  +R Y GH+ AVR + FSNDG+QF+S  +DRF++ WDTETGQ + +FT R++PYC KFYP+DN  F+ G S+N VV                             +RFVSTSDDKK+L+WE+ IPVPIKYISEP MHSMPA TLHPSGGFF GQSL+N+I  +TARDKF+  RKK FKGH NAGYAC++ FSPNG+++ SGDG+GK+  WDW +TK+ +K + HD GP +   WHPLEPS V + GWDG+IK WD
Sbjct:    1 MEALGAYASSDE----EEASRSTSP-RSTDSPSLALPVVNSAPFVALTDRQEEANKAAFL-----------TAGTQTQLAVNLP-VESTLAPYVGPQSSGTMDLALVDPLRAGSGKQVVTGVVEQADMEDFSFEAQYHTYNQTLSRNPARNRAKGAPPSAPALPGEKLADTIVAPGEENVFTSCNAKKRKNQ----------VVSKERAAAEDFGDEATDGIWAPYKEKGKTLTDAEKGTMTEQQKALRE--EHQEAKRRKAEAKEEADDEMDFDRMVEKKTGHLLPARLKAGQTALEGKSTFLGDQEYDYQGRAWVEPPR--TLKPDNGDHQVFLPKRCVHKWTGHTKGVQAIELFPQYGHLLLSGSMDNTVRIWDVYNERKCQRVYEGHSGAVRGINFSNDGRQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCVKFYPLDNTNFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKINRKKVFKGHQNAGYACQIGFSPNGQYIMSGDGEGKLVFWDWKTTKMIKKLRAHDRGPTMGALWHPLEPSKVISCGWDGLIKYWD 607          
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Match: H3GUK7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUK7_PHYRM)

HSP 1 Score: 485 bits (1248), Expect = 3.370e-159
Identity = 282/633 (44.55%), Postives = 363/633 (57.35%), Query Frame = 3
Query:   96 MNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRAMDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPHKREL----PVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTVGNLAEH----GKRQGDTVLTADAGGV--RRKRKKSGGDGANEGGDVGDGKEDADRDLGETDTDSVWAP--EAPREKTDFEAGRMTEEQSKFREAWEAEQAKK---HREYNMEEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPPAGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMDGTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWDTETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMHSMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYACRMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPLEPSWVATAGWDGIIKLWD 1949
            M  L  Y S D    DE    + +P R     +F  P VN+AP V  S   +QAS +        L   + +     Q+ ++ P  E   AP  GP       L    P+  G       GV+EQ  +ED SF  QYHT +Q     + R    G         G+   D+V+      V  RR  KK      ++       +  A  + G+  TD VWAP  E   + TD E G MTE+Q   RE  +  + +K     E + E D DR  E+K  HLLP R      + + +STF G  ++DYQGR+W+ PP    L+ +  DHQ F PKKC+H++AGHTKGVQAI  FP YGHLLLS SMD TV+IWDV   R  +R Y GHT AVRD+ FSNDG+QF+S  +DRF++ WDTETGQ + +FT R++PYC KFYP+DN  F+ G S+N VV                             +RFVSTSDDKK+L+WE+ IPVPIKYISEP MHSMPA TLHPSGGFF GQS++N+I  +TARDKF+  RKK F+GH NAGYAC++ FSPNG+++ SGDG+GK+  WDW STK+ +K + HD GP +   WHPLEPS V + GWDG+IK WD
Sbjct:    1 MEALGAYASSD----DEASPHATSP-RSTDSPAFALPTVNSAPFVALSDIQEQASKA------AFLAAASQS-----QLAVNLP-VESTLAPYVGPQGSDSSALTLMDPLRTGSGKEVVTGVVEQADMEDLSFEAQYHTHNQTLSRNNTRTRVKGAPPVAPPLPGETVEDSVIVPSEENVFTRRNAKKRKNQTLSK-------ERAAAEEFGDESTDGVWAPYTEKGNQLTDAEMGTMTEQQKALREQHQEAKRRKAEAKEEVDDEMDFDRMVEKKTGHLLPARLKAGQTAVEGKSTFMGDHEYDYQGRAWVEPPR--TLKPDDGDHQVFLPKKCVHKWAGHTKGVQAIELFPRYGHLLLSGSMDHTVRIWDVYNERKCQRVYEGHTGAVRDINFSNDGRQFLSCSFDRFIQLWDTETGQAVNSFTTRRVPYCVKFYPLDNTNFVVGDSNNMVVQFDTRSGEIVQEYNHHLQAVNSVTFVDDNKRFVSTSDDKKLLVWEWGIPVPIKYISEPSMHSMPAVTLHPSGGFFAGQSMNNQIDVYTARDKFKMNRKKVFRGHQNAGYACQIGFSPNGQYVMSGDGEGKLVFWDWKSTKMIKKLRAHDRGPTMGALWHPLEPSKVISCGWDGLIKYWD 607          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.66.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G098_ECTSI0.000e+080.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBI0_9STRA2.120e-20356.76WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2Y0E0_9STRA2.470e-18549.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TQP6_9STRA5.000e-17550.00Pre-mrna-processing factor 17 n=2 Tax=Monodopsidac... [more]
A0A7S2WI16_9STRA1.650e-17049.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K8Z4U6_NANGC3.410e-17049.82Pre-mRNA-processing factor 17 n=1 Tax=Nannochlorop... [more]
F0Y5V9_AURAN6.990e-16651.78Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
K3WD12_GLOUD3.140e-16144.01Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
G4Z505_PHYSP1.690e-15944.20Putative pre-mRNA splicing factor n=4 Tax=Phytopht... [more]
H3GUK7_PHYRM3.370e-15944.55Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:418543..421925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1015.8
Seed ortholog evalue8.8e-294
Seed eggNOG ortholog2880.D7G098
Preferred nameCDC40
KEGG koko:K12816
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000348,GO:0000350,GO:0000375,GO:0000377,GO:0000389,GO:0000393,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0031123,GO:0031124,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0034399,GO:0034613,GO:0034622,GO:0034641,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0045292,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0070727,GO:0071007,GO:0071013,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
EggNOG free text desc.mRNA splicing, via spliceosome
EggNOG OGsKOG0282@1,KOG0282@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-14_005040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons4
Model size2392
Cds size1857
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.66.1prot_F-serratus_M_contig10.66.1Fucus serratus malepolypeptideF-serratus_M_contig10 418638..421460 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928783.118992-UTR-F-serratus_M_contig10:418542..4186371622928783.118992-UTR-F-serratus_M_contig10:418542..418637Fucus serratus maleUTRF-serratus_M_contig10 418543..418637 +
1690962568.9367955-UTR-F-serratus_M_contig10:418542..4186371690962568.9367955-UTR-F-serratus_M_contig10:418542..418637Fucus serratus maleUTRF-serratus_M_contig10 418543..418637 +
1622928783.1784172-UTR-F-serratus_M_contig10:421460..4216891622928783.1784172-UTR-F-serratus_M_contig10:421460..421689Fucus serratus maleUTRF-serratus_M_contig10 421461..421689 +
1690962568.9775002-UTR-F-serratus_M_contig10:421460..4216891690962568.9775002-UTR-F-serratus_M_contig10:421460..421689Fucus serratus maleUTRF-serratus_M_contig10 421461..421689 +
1622928783.20571-UTR-F-serratus_M_contig10:421714..4219251622928783.20571-UTR-F-serratus_M_contig10:421714..421925Fucus serratus maleUTRF-serratus_M_contig10 421715..421925 +
1690962568.986627-UTR-F-serratus_M_contig10:421714..4219251690962568.986627-UTR-F-serratus_M_contig10:421714..421925Fucus serratus maleUTRF-serratus_M_contig10 421715..421925 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928783.1320486-CDS-F-serratus_M_contig10:418637..4200741622928783.1320486-CDS-F-serratus_M_contig10:418637..420074Fucus serratus maleCDSF-serratus_M_contig10 418638..420074 +
1690962568.9464116-CDS-F-serratus_M_contig10:418637..4200741690962568.9464116-CDS-F-serratus_M_contig10:418637..420074Fucus serratus maleCDSF-serratus_M_contig10 418638..420074 +
1622928783.1454265-CDS-F-serratus_M_contig10:420661..4209791622928783.1454265-CDS-F-serratus_M_contig10:420661..420979Fucus serratus maleCDSF-serratus_M_contig10 420662..420979 +
1690962568.954172-CDS-F-serratus_M_contig10:420661..4209791690962568.954172-CDS-F-serratus_M_contig10:420661..420979Fucus serratus maleCDSF-serratus_M_contig10 420662..420979 +
1622928783.1611662-CDS-F-serratus_M_contig10:421358..4214601622928783.1611662-CDS-F-serratus_M_contig10:421358..421460Fucus serratus maleCDSF-serratus_M_contig10 421359..421460 +
1690962568.9668994-CDS-F-serratus_M_contig10:421358..4214601690962568.9668994-CDS-F-serratus_M_contig10:421358..421460Fucus serratus maleCDSF-serratus_M_contig10 421359..421460 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig10.66.1

>prot_F-serratus_M_contig10.66.1 ID=prot_F-serratus_M_contig10.66.1|Name=mRNA_F-serratus_M_contig10.66.1|organism=Fucus serratus male|type=polypeptide|length=619bp
MNLLAGYGSGDENSSDEGGARSAAPARKQTITSFRAPRVNAAPHVVASRA
MDQASSSLMAPPTGMLGLKNSTPKVGGQIMIHNPKAEHFRAPVQGPAHPH
KRELPVPAGGRATGTGGVIEQTSLEDWSFHEQYHTFHQFGYAVDCRGDTV
GNLAEHGKRQGDTVLTADAGGVRRKRKKSGGDGANEGGDVGDGKEDADRD
LGETDTDSVWAPEAPREKTDFEAGRMTEEQSKFREAWEAEQAKKHREYNM
EEDHDRRDERKISHLLPPRHNRDTESKKARSTFHGKAQHDYQGRSWMAPP
AGARLEEEGEDHQCFTPKKCIHRYAGHTKGVQAISFFPGYGHLLLSASMD
GTVKIWDVNGGRGQRRTYIGHTAAVRDVQFSNDGKQFISAGYDRFVRQWD
TETGQCLGTFTNRKMPYCAKFYPVDNNIFLCGCSDNRVVQYDARSGEVVQ
EYNHHLGPVNTVLFVDDNQRFVSTSDDKKVLIWEYNIPVPIKYISEPDMH
SMPATTLHPSGGFFVGQSLDNKIVTWTARDKFRQMRKKEFKGHVNAGYAC
RMAFSPNGKFLASGDGQGKMYIWDWGSTKVYRKHQCHDDGPCIDIAWHPL
EPSWVATAGWDGIIKLWD*
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mRNA from alignment at F-serratus_M_contig10:418543..421925+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig10.66.1 ID=mRNA_F-serratus_M_contig10.66.1|Name=mRNA_F-serratus_M_contig10.66.1|organism=Fucus serratus male|type=mRNA|length=3383bp|location=Sequence derived from alignment at F-serratus_M_contig10:418543..421925+ (Fucus serratus male)
GCAACCGCTGGGTGCGTCCTCTCGCTGTCCCGATCTCAGTGTTGTAGTCT GACATTGTATCGTGATAATTAATCCAGTAGTCTCGTGAAGTCACAATGAA CCTTTTGGCAGGATACGGCAGTGGCGACGAGAACTCATCCGATGAGGGCG GTGCAAGATCGGCAGCGCCTGCTCGGAAACAGACCATTACATCTTTCCGG GCGCCGCGTGTGAACGCAGCACCTCACGTGGTCGCATCTAGAGCGATGGA CCAGGCTTCGTCTTCCCTTATGGCCCCACCGACGGGGATGCTGGGTCTTA AGAATAGTACTCCGAAGGTGGGAGGTCAAATTATGATCCACAACCCCAAG GCCGAGCACTTCCGCGCACCTGTGCAAGGCCCAGCACACCCGCACAAGCG AGAGCTGCCCGTCCCGGCCGGTGGGCGCGCCACGGGTACCGGCGGCGTGA TCGAGCAGACCTCTCTAGAAGATTGGTCCTTCCATGAGCAGTACCACACC TTCCACCAGTTCGGCTACGCGGTGGACTGTCGGGGCGACACCGTCGGCAA CCTTGCCGAGCACGGGAAGCGTCAGGGGGACACGGTTCTCACAGCGGACG CCGGAGGCGTGCGACGCAAGCGGAAGAAGAGCGGCGGGGACGGGGCAAAT GAGGGTGGCGATGTCGGCGACGGAAAGGAGGATGCTGATCGAGATCTTGG TGAAACAGACACGGACAGCGTGTGGGCTCCGGAGGCACCGAGGGAAAAAA CGGACTTCGAGGCAGGCAGGATGACCGAAGAGCAATCAAAATTCCGAGAG GCTTGGGAGGCGGAGCAGGCAAAGAAGCACCGCGAGTACAACATGGAGGA GGACCACGACAGACGAGACGAACGCAAAATCTCGCACCTTCTTCCGCCGA GGCACAACCGGGACACGGAGTCCAAGAAGGCGCGGTCTACATTCCACGGA AAGGCGCAGCACGACTACCAGGGGAGGTCGTGGATGGCGCCGCCTGCCGG AGCAAGGCTTGAGGAGGAAGGGGAAGACCACCAGTGCTTCACGCCCAAGA AGTGCATCCATCGGTACGCAGGGCACACGAAAGGAGTGCAGGCGATCTCG TTCTTCCCGGGGTATGGGCACTTGCTTCTTTCAGCGAGCATGGATGGCAC GGTGAAGATCTGGGACGTGAACGGGGGGAGAGGGCAGCGGCGGACGTACA TAGGGCACACAGCGGCCGTGCGGGACGTGCAGTTTAGCAACGACGGAAAG CAGTTCATCAGCGCCGGATACGACCGCTTCGTGCGGCAATGGGACACGGA GACGGGGCAGTGCCTGGGGACGTTCACTAACCGTAAGATGCCTTACTGCG CCAAGTTCTACCCGGTCGACAACAACATATTCTTGTGCGGTTGCTCGGAC AACCGCGTCGTGCAATACGACGCCCGTTCCGGGGAGGTTGTACAGGAATA CAATCACCACCTGGGACCCGTCAACACGGTGCTCTTTGTGGATGACAACC AGCGCTTTGTCAGCACTTCCGACGACAAAAAGGTGCGCACGAGGCGTGGG GGTCGTTACTGTTGTGCCGTGTGTTAGTCTATGACGCGCATTCTGGGCGC TCGGGGGAACGACACGCTGTAGTCGCTGCCCGACCCCGAAAGACACATGG ACATCCATACCGGTATTCGTTCTGTACAACTGCTTTTGCTGTTCTACTAT GATATGAACAATCTTGGTTGCTTAGAGAGTGACAAGGGTTGTTGGCGGCG TCTTCCCTTTGCATAAGATTGACATACGCTTCTAATGACGGGTGCCCCGG CACCGGAGAAGCGAACGTTTGGCGTCGCATTGAGTCGGTCGTCGAGAGAT ATATTTATTTGCGTGTTTTGTATCCCGTGCATTTTCATTACGTTTTTCGA CCATAGCAAAACCCCAATGCCCTCTCGTCTCCTCTCCTTTGCTTCCCCCG TTCGAATTCGTGCGGGAGAACCACCGCATTTCACTCCTTACTTAGTCTTT TATTATTCCCTTGCTCTCGCCTCCCCTTTCCCGCCGCTCTCATGTGTGGG ACTCTCTTTCCCTCTCTTTCCCGCTGTCGGACCCCGATGACCCGGCCCCA CGCCGTCCACCCGACGCAGGTGTTGATTTGGGAGTACAACATCCCCGTGC CCATCAAGTACATCTCGGAGCCGGACATGCACTCAATGCCGGCGACGACT CTCCATCCTTCGGGAGGTTTCTTCGTGGGACAGTCCCTTGACAATAAGAT CGTCACGTGGACGGCCCGGGACAAATTCAGGCAGATGCGGAAGAAGGAGT TCAAGGGCCACGTGAACGCGGGCTACGCCTGCCGCATGGCCTTCAGCCCG AACGGAAAGTTCTTGGCGTCCGGGGACGGGCAGGGGAAGATGTACATTTG GGACTGGGGGAGCACCAAGGTCTACCGTAAGCATCAGGTAAGAGAGCACG TTGAGCGACCCAACCTCTATATACCCCAAGCGGGTTGGAACATTTTTGTT TGTGGTTTGTTCTTCTCCGAAGGGGGCATGTACTGTTAAAAGGGTAAAGA GCGCGCATCCTAACTCAAGGTAGAGCAACAAATTGTGCCCGGACTGCTGC CCAAGTGACATAAGATAAGTGCCTGACGCGCGCGTGGAGTTGTGGGCGCT TTCTTCCCATCTTCAGGTGCCTGCTCGCCGCCGCTACGTGCACCGATCAC CGGTTCAGCGCTTTGTGAAATGATGGATTCGCCTGCTCTCGGCACGTTCT GTGTTTCATTTTTCGCCCCCCCCCCCCCCCTTTTTCCCTCACACTGTTTG GCCCACCGTACATCAGTGCCACGACGACGGCCCCTGTATCGACATTGCAT GGCATCCCCTGGAGCCGAGCTGGGTTGCAACAGCGGGCTGGGACGGAATT ATAAAGCTCTGGGACTAGCGGGGATGGACGCGTGAGACCCGAGGTGCTTT CTAGAGTCCGCCGGACTCTGCATTTGTAAGAAGAGGGCGACTGAATTTTG TGTATCCCACTATTAATAGTTTGGCTGAATGGCCACCGAGGCGTGTGTAC CCTAGGCGGTCAAATTCTCTGTAGTCACGTTGTCAGGGGATACTCTCTAA GCGGTTGTGTCCTGAGGATAATGTGGCAAGTGACAGGGGAACTCTAAGCG GTTGTGACAGGGGAACTCTAAGCGGTTTTGTCCTGAGGATAATGCGGCAA GTGATAGGGGAGTTCACCTCCAACATCGGGACGTTGGGCTTAGCATCCCC TGTCGAGTTTTTCCGAAGCAGCGGGGGCACGGACGTTTCAGGGCGTAGTT CTAGAAGGACTTCAAAGGACCTTCCGCAAACGGCAACGTTTATTGGTCTA TCAGAGTCATAGTTGTCGTTAATGCGAGATGGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig10:418543..421925+

>mRNA_F-serratus_M_contig10.66.1 ID=mRNA_F-serratus_M_contig10.66.1|Name=mRNA_F-serratus_M_contig10.66.1|organism=Fucus serratus male|type=CDS|length=3714bp|location=Sequence derived from alignment at F-serratus_M_contig10:418543..421925+ (Fucus serratus male)
ATGAACCTTTTGGCAGGATACGGCAGTGGCGACGAGAACTCATCCGATGA
GGGCGGTGCAAGATCGGCAGCGCCTGCTCGGAAACAGACCATTACATCTT
TCCGGGCGCCGCGTGTGAACGCAGCACCTCACGTGGTCGCATCTAGAGCG
ATGGACCAGGCTTCGTCTTCCCTTATGGCCCCACCGACGGGGATGCTGGG
TCTTAAGAATAGTACTCCGAAGGTGGGAGGTCAAATTATGATCCACAACC
CCAAGGCCGAGCACTTCCGCGCACCTGTGCAAGGCCCAGCACACCCGCAC
AAGCGAGAGCTGCCCGTCCCGGCCGGTGGGCGCGCCACGGGTACCGGCGG
CGTGATCGAGCAGACCTCTCTAGAAGATTGGTCCTTCCATGAGCAGTACC
ACACCTTCCACCAGTTCGGCTACGCGGTGGACTGTCGGGGCGACACCGTC
GGCAACCTTGCCGAGCACGGGAAGCGTCAGGGGGACACGGTTCTCACAGC
GGACGCCGGAGGCGTGCGACGCAAGCGGAAGAAGAGCGGCGGGGACGGGG
CAAATGAGGGTGGCGATGTCGGCGACGGAAAGGAGGATGCTGATCGAGAT
CTTGGTGAAACAGACACGGACAGCGTGTGGGCTCCGGAGGCACCGAGGGA
AAAAACGGACTTCGAGGCAGGCAGGATGACCGAAGAGCAATCAAAATTCC
GAGAGGCTTGGGAGGCGGAGCAGGCAAAGAAGCACCGCGAGTACAACATG
GAGGAGGACCACGACAGACGAGACGAACGCAAAATCTCGCACCTTCTTCC
GCCGAGGCACAACCGGGACACGGAGTCCAAGAAGGCGCGGTCTACATTCC
ACGGAAAGGCGCAGCACGACTACCAGGGGAGGTCGTGGATGGCGCCGCCT
GCCGGAGCAAGGCTTGAGGAGGAAGGGGAAGACCACCAGTGCTTCACGCC
CAAGAAGTGCATCCATCGGTACGCAGGGCACACGAAAGGAGTGCAGGCGA
TCTCGTTCTTCCCGGGGTATGGGCACTTGCTTCTTTCAGCGAGCATGGAT
GGCACGGTGAAGATCTGGGACGTGAACGGGGGGAGAGGGCAGCGGCGGAC
GTACATAGGGCACACAGCGGCCGTGCGGGACGTGCAGTTTAGCAACGACG
GAAAGCAGTTCATCAGCGCCGGATACGACCGCTTCGTGCGGCAATGGGAC
ACGGAGACGGGGCAGTGCCTGGGGACGTTCACTAACCGTAAGATGCCTTA
CTGCGCCAAGTTCTACCCGGTCGACAACAACATATTCTTGTGCGGTTGCT
CGGACAACCGCGTCGTGCAATACGACGCCCGTTCCGGGGAGGTTGTACAG
GAATACAATCACCACCTGGGACCCGTCAACACGGTGCTCTTTGTGGATGA
CAACCAGCGCTTTGTCAGCACTTCCGACGACAAAAAGATGAACCTTTTGG
CAGGATACGGCAGTGGCGACGAGAACTCATCCGATGAGGGCGGTGCAAGA
TCGGCAGCGCCTGCTCGGAAACAGACCATTACATCTTTCCGGGCGCCGCG
TGTGAACGCAGCACCTCACGTGGTCGCATCTAGAGCGATGGACCAGGCTT
CGTCTTCCCTTATGGCCCCACCGACGGGGATGCTGGGTCTTAAGAATAGT
ACTCCGAAGGTGGGAGGTCAAATTATGATCCACAACCCCAAGGCCGAGCA
CTTCCGCGCACCTGTGCAAGGCCCAGCACACCCGCACAAGCGAGAGCTGC
CCGTCCCGGCCGGTGGGCGCGCCACGGGTACCGGCGGCGTGATCGAGCAG
ACCTCTCTAGAAGATTGGTCCTTCCATGAGCAGTACCACACCTTCCACCA
GTTCGGCTACGCGGTGGACTGTCGGGGCGACACCGTCGGCAACCTTGCCG
AGCACGGGAAGCGTCAGGGGGACACGGTTCTCACAGCGGACGCCGGAGGC
GTGCGACGCAAGCGGAAGAAGAGCGGCGGGGACGGGGCAAATGAGGGTGG
CGATGTCGGCGACGGAAAGGAGGATGCTGATCGAGATCTTGGTGAAACAG
ACACGGACAGCGTGTGGGCTCCGGAGGCACCGAGGGAAAAAACGGACTTC
GAGGCAGGCAGGATGACCGAAGAGCAATCAAAATTCCGAGAGGCTTGGGA
GGCGGAGCAGGCAAAGAAGCACCGCGAGTACAACATGGAGGAGGACCACG
ACAGACGAGACGAACGCAAAATCTCGCACCTTCTTCCGCCGAGGCACAAC
CGGGACACGGAGTCCAAGAAGGCGCGGTCTACATTCCACGGAAAGGCGCA
GCACGACTACCAGGGGAGGTCGTGGATGGCGCCGCCTGCCGGAGCAAGGC
TTGAGGAGGAAGGGGAAGACCACCAGTGCTTCACGCCCAAGAAGTGCATC
CATCGGTACGCAGGGCACACGAAAGGAGTGCAGGCGATCTCGTTCTTCCC
GGGGTATGGGCACTTGCTTCTTTCAGCGAGCATGGATGGCACGGTGAAGA
TCTGGGACGTGAACGGGGGGAGAGGGCAGCGGCGGACGTACATAGGGCAC
ACAGCGGCCGTGCGGGACGTGCAGTTTAGCAACGACGGAAAGCAGTTCAT
CAGCGCCGGATACGACCGCTTCGTGCGGCAATGGGACACGGAGACGGGGC
AGTGCCTGGGGACGTTCACTAACCGTAAGATGCCTTACTGCGCCAAGTTC
TACCCGGTCGACAACAACATATTCTTGTGCGGTTGCTCGGACAACCGCGT
CGTGCAATACGACGCCCGTTCCGGGGAGGTTGTACAGGAATACAATCACC
ACCTGGGACCCGTCAACACGGTGCTCTTTGTGGATGACAACCAGCGCTTT
GTCAGCACTTCCGACGACAAAAAGGTGTTGATTTGGGAGTACAACATCCC
CGTGCCCATCAAGTACATCTCGGAGCCGGACATGCACTCAATGCCGGCGA
CGACTCTCCATCCTTCGGGAGGTTTCTTCGTGGGACAGTCCCTTGACAAT
AAGATCGTCACGTGGACGGCCCGGGACAAATTCAGGCAGATGCGGAAGAA
GGAGTTCAAGGGCCACGTGAACGCGGGCTACGCCTGCCGCATGGCCTTCA
GCCCGAACGGAAAGTTCTTGGCGTCCGGGGACGGGCAGGGGAAGATGTAC
ATTTGGGACTGGGGGAGCACCAAGGTCTACCGTAAGCATCAGGTGTTGAT
TTGGGAGTACAACATCCCCGTGCCCATCAAGTACATCTCGGAGCCGGACA
TGCACTCAATGCCGGCGACGACTCTCCATCCTTCGGGAGGTTTCTTCGTG
GGACAGTCCCTTGACAATAAGATCGTCACGTGGACGGCCCGGGACAAATT
CAGGCAGATGCGGAAGAAGGAGTTCAAGGGCCACGTGAACGCGGGCTACG
CCTGCCGCATGGCCTTCAGCCCGAACGGAAAGTTCTTGGCGTCCGGGGAC
GGGCAGGGGAAGATGTACATTTGGGACTGGGGGAGCACCAAGGTCTACCG
TAAGCATCAGTGCCACGACGACGGCCCCTGTATCGACATTGCATGGCATC
CCCTGGAGCCGAGCTGGGTTGCAACAGCGGGCTGGGACGGAATTATAAAG
CTCTGGGACTAGTGCCACGACGACGGCCCCTGTATCGACATTGCATGGCA
TCCCCTGGAGCCGAGCTGGGTTGCAACAGCGGGCTGGGACGGAATTATAA
AGCTCTGGGACTAG
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