mRNA_F-serratus_M_contig10.58.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A6T1L8M4_9DINO (Hypothetical protein n=4 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1L8M4_9DINO) HSP 1 Score: 85.9 bits (211), Expect = 5.770e-15 Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 34 IFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRA---EGVVFSILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYP------IPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFF 468 +FW ++LV T AFGGG LAP ++ PV + ++ + W ++H I A + V+ VL +F+ + G + L+ ++ P +P P+ G + GCGG FLP DKGL+ + G WP+ +AF+ +A + Sbjct: 75 LFWPKALVTTGIAAFGGGFLAPLVVAHCPVPLREETFFWILVVAWYVTHHVPYLSAAWCEIATAKPGKTVLTVLFCIFKTQQIVGSIELAAKAVDHEPLMPHSRYFFVPCAAPLLCGFLGGCGGAFLPFDKGLRPISEGKAWPVSAAFFTTAIY 228
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A813H4M2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H4M2_POLGL) HSP 1 Score: 86.3 bits (212), Expect = 6.270e-15 Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = 1 Query: 37 FWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFS---ILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKA------GKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNI 474 +WA+SLV+T AFGGG LAP ++G P + W ++H V S + +Q ++ VL +F+ + G++ LS ++ + + P P+ G + GCGG FLPL KGL ++ G WP+ +AF + F+ + Sbjct: 100 YWAKSLVVTGIAAFGGGFLAPAIVGHCPPPLREETFFWACVFSWYVTHYVPYVSASWKDLSRTRAMQLLLTVLFGIFKTQQIVGLIELSAKAIAEENLIPQSRYFSQPCAAPLLCGFLGGCGGAFLPLSKGLLPIEQGKQWPVSAAFLATVFYYV 254
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A6U2DME3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2DME3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 7.900e-15 Identity = 59/159 (37.11%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 31 PIFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILN-APVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYP-----IPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDP 489 P F SL+L FGGG+ P L PV ND + PL + H +V +N + +++ V VL E R GMV ++N ++ AG+ P PL+GPIF GTI+GCGG FLPL+KGL +K G P+ +A G+ ++F+ P Sbjct: 57 PSFKFVSLILA---CFGGGVFVPIFLNMLPVPIANDSL-PLGVIVSFTIHNYFPIVRKFMNVSDILKVVFVVLFETLR-----GMV-VTNFTVAAGETIPPSFFSFPLFGPIFCGTIAGCGGAFLPLNKGLDPIKKGLAPPMITAGIGATMLHLFLNTP 205
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A7S1SEQ8_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SEQ8_ALECA) HSP 1 Score: 85.9 bits (211), Expect = 9.260e-15 Identity = 44/153 (28.76%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 37 FWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFS---ILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYP------IPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFF 468 FW ++LV T AFGGG LAP ++G PV + + W ++H V + I + + + +F+ + G + ++ +++ P +P+ GP+ G + GCGG FLP DKGL+ + G WP+ +AF+G+ + Sbjct: 109 FWPKALVTTAIAAFGGGFLAPLIVGHCPVPLREETFAWFLVFSWYVTHHVPFVSATWCEIARSKPGHIALTIFFCIFKTQQIVGSIEVAAKAVEHEPLMPHSRYFFVPMAGPLVCGFLGGCGGAFLPFDKGLRPISEGKQWPVTAAFFGTVIY 261
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A7S2N4B3_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2N4B3_9DINO) HSP 1 Score: 85.9 bits (211), Expect = 9.980e-15 Identity = 50/174 (28.74%), Postives = 82/174 (47.13%), Query Frame = 1 Query: 34 IFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFS---ILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYP------IPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNVGPYLRDAAAAV 528 +FW ++L T AFGGG LAP ++ PV + + L W ++H V I + V+ + VF+ + G + L+ ++ P +P+ GP+ G + GCGG FLP DKGL+ ++ G WP+ +AF+ + + VG + DA A+ Sbjct: 114 MFWPKALTTTGIAAFGGGFLAPLVVAHCPVPLREETFFWFLVLSWYITHHVPFVSAKWCEIAKSKAGWTVLTIFFGVFKTQQIVGSIELAAKAVDHEALMPHSRYFFVPMAGPLVCGFLGGCGGAFLPFDKGLRPIEEGKQWPVSAAFFATVIYYFLTRWLKVG--MLDAKMAI 285
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A7S2EDN4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EDN4_TRICV) HSP 1 Score: 82.8 bits (203), Expect = 3.940e-14 Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 79 GGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILN-----APVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDP 489 GGGI+ P LL PV ND +V +LS + F IL + +++ VL E FR + G+ + + + +PIP++GPIF G I+GCGG FLP +KGL+ +K G P+ SA +A F+IF+ P Sbjct: 73 GGGIIVPILLNGLPVALANDALV-----LAMLSAFGIHLYFPILREVFKLSDLLKATFVVLFETFRCGVVIGLTTAAAAKIPPSV-FPIPVFGPIFCGAIAGCGGAFLPFNKGLEPIKGGLASPMLSALVVAACFHIFMSTP 208
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A7S4IEG9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IEG9_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 4.580e-14 Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 22 DRKPIFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILN-APVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYP----IPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDP 489 D P SL++ FGGGI+ P L PV ND + L L H ++ ++N + +++ V+ VL E RA MV ++ +S A K P PL+GPIF GTI+GCGG FLP +KGL +K G P+ +A G+ F++F+ P Sbjct: 57 DSPPSLKFVSLLMA---CFGGGIIVPIFLNIYPVPIANDALT-LGALVSFTIHHYFPILREVINLSDILKVVLVVLFETLRA-----MVVVNFTSAAADKIPPSFFSFPLFGPIFCGTIAGCGGAFLPFNKGLDPIKKGLAPPMLTAAIGATMFHLFLNTP 208
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A448Z417_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z417_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 7.040e-14 Identity = 61/179 (34.08%), Postives = 86/179 (48.04%), Query Frame = 1 Query: 79 GGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILN-APVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNVGPYLRDAAAAVLGEGDLQTQGKAIVAAFLCSCAILKTFL 612 GGGIL P L PV D P+ + L H + +L + + + V+ + E RA + L+ S++ A + P++GPI GTI GCGG FLPLDKGL L G P P+ SAF G+ FF++F Y + D + +GK IVA + A +K L Sbjct: 81 GGGILVPIFLNTVPVTLSIDAY-PIAIMISYLLHTYIPSLREVLELSGIFKAVVILFYESIRAYVVTLFTGLAASTI-AASQFSFPVFGPIICGTIGGCGGAFLPLDKGLAPLHDGLPAPVFSAFVGATFFHLFT-----QLYAEEVV-------DCKKKGKVIVALWFIIYAYVKAGL 245
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A7S1V1V1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V1V1_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 7.240e-14 Identity = 46/135 (34.07%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 79 GGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILNAP-VVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFV 480 GGGI+ P + PV D P+ L H+ ++ +L V++ + L E RA+ + + A + +++ ++ IP++GPIF GTI+GCGG FLPL+KGL +K+G + SA +G F+++FV Sbjct: 67 GGGIMVPIFINSIPVPLTTDAY-PIAIFASFLLHQYFPLLREVLKVSYVLKAAVIFLYETLRASVVVKLTAAAAAAIPP-SEFSIPIFGPIFCGTIAGCGGAFLPLNKGLDPIKNGLAPNMMSAMFGGLFYHVFV 199
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: B5Y4T6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4T6_PHATC) HSP 1 Score: 81.6 bits (200), Expect = 1.060e-13 Identity = 50/144 (34.72%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 52 LVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILN-APVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLK-HGAPWPLESAFYGSAFFNIF 477 LV GGG L P L PV D P+ + L H+ ++ +L+ +P+++ + + E RA+ + + + + A D+ IPL+GPIF G I+GCGG FLPL+KGL +K +G P+ SAF G+ F+++F Sbjct: 64 LVSMILQCTGGGTLVPIFLNGIPVSLAQDSY-PIAIIVAFLLHQYLPILRDVLSLSPILKVAVIFMYETLRASVVVKLTTAAAKVIPA-SDFAIPLFGPIFCGAIAGCGGSFLPLNKGLDPIKANGLGQPMLSAFIGATFYHLF 205 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.58.1 >prot_F-serratus_M_contig10.58.1 ID=prot_F-serratus_M_contig10.58.1|Name=mRNA_F-serratus_M_contig10.58.1|organism=Fucus serratus male|type=polypeptide|length=149bp MVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPback to top mRNA from alignment at F-serratus_M_contig10:244186..248492+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.58.1 ID=mRNA_F-serratus_M_contig10.58.1|Name=mRNA_F-serratus_M_contig10.58.1|organism=Fucus serratus male|type=mRNA|length=4307bp|location=Sequence derived from alignment at F-serratus_M_contig10:244186..248492+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:244186..248492+ >mRNA_F-serratus_M_contig10.58.1 ID=mRNA_F-serratus_M_contig10.58.1|Name=mRNA_F-serratus_M_contig10.58.1|organism=Fucus serratus male|type=CDS|length=894bp|location=Sequence derived from alignment at F-serratus_M_contig10:244186..248492+ (Fucus serratus male)back to top |