mRNA_F-serratus_M_contig10.58.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI) HSP 1 Score: 359 bits (921), Expect = 1.910e-118 Identity = 168/241 (69.71%), Postives = 200/241 (82.99%), Query Frame = 1 Query: 1 VRKGEKADRKPIFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNVGPYLRDAAAAVLGEGDLQTQGKAIVAAFLCSCAILKTFLGPEFNPFTPIHNAMYTITGIPKPAAGGTPRTEKPKED 723 VRK EK K +FWAESLV+T+ +AFGGGILAPFLLGKPPV+FVNDLIVPLV +CW +S+RAEG +F+++N P+++QVI VL+EVFRANS+CG+V LSNS LK GK YPI LWGPI LGT+ GCGGLFLPLDKGLKGLK+GAPWPL+SAFYGS FFN+FV+DPNVGPYLRDAAA L +GDL QG+AIVA FLC A+ +T + P FNPFTP+HN +YT+TG+P P A EKPK D Sbjct: 59 VRKIEKDSGKQMFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPLVAVCWFVSNRAEGPIFALINTPIMKQVILVLSEVFRANSMCGIVVLSNSILKPGKHYPIALWGPILLGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPNVGPYLRDAAALFL-DGDLVVQGRAIVAGFLCVVALAQTLISPAFNPFTPVHNVVYTVTGVPNPEAVAVATGEKPKAD 298
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A835Z0I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I7_9STRA) HSP 1 Score: 239 bits (611), Expect = 4.770e-72 Identity = 114/224 (50.89%), Postives = 151/224 (67.41%), Query Frame = 1 Query: 28 KPIFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNVGPYLRDAAAAVLGEGDLQTQGKAIVAAFLCSCAILKTFLGPEFNPFTPIHNAMYTITGIPKPAAGGTP 699 K ++WA+SLVLTF + FGGGI+APFLLGKPPV+ +NDL+V V W++ +R E V ++L APV+ Q + +AEVFRAN C MV ++ + AGK YPIP WGP+ LGTI+GC G+FLP DKGL +K G+PWPL+SAFYGS F++ DP+V R A A G+ +A V AF + A L+T+ GP FNPF+P+H Y I+G+ P A G P Sbjct: 43 KNMYWAQSLVLTFLMCFGGGIVAPFLLGKPPVILINDLLVVAVLGSWLVVNRLEEPVGALLRAPVISQALAFMAEVFRANGFCRMVQVAFKEIPAGKYYPIPFWGPVLLGTIAGCAGMFLPFDKGLASIKGGSPWPLQSAFYGSLAFHLLAHDPHV----RAALAPYAGDYTADA-ARACVVAFFAAVATLQTYAGPHFNPFSPLHRVAYAISGVKAPGANGAP 261
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A835Z4Q5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q5_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.220e-39 Identity = 85/213 (39.91%), Postives = 116/213 (54.46%), Query Frame = 1 Query: 40 WAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWIL-SHRAEGVVFSILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYP----IPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNVGPYLRDAAAAVLGEGDLQTQGKAIVAAFLCSCAILKTFLGPEFNPFTPIHNAMYTI 663 W ES+VL AFGG +LA LL +PP + D +PL+ W L +H + ++L PVV Q+ VL E RA LC +V + SL+A P +P +GPI G +S CGGLF P D+GL+ L+ G PWPL+SA Y + F+++ V + GP R VLG +A VAA C L+T GP FN P+H A+Y + Sbjct: 28 WLESIVLVTLTAFGGHLLAQTLLREPPDLITCDTYLPLILASWYLVNHSPFNAIPALLAMPVVHQLAVVLMESHRAAVLCAVVTAAAGSLRAAGSAPNAPALPFFGPIIAGAVSACGGLFFPPDRGLRSLREGVPWPLQSALYAATFYHLAVHEQ--GPLGRFLRHYVLGAAVDAAAARAAVAALFSICGALQTAFGPSFNALAPLHAAVYAL 238
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A4D9CX56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX56_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.160e-34 Identity = 78/213 (36.62%), Postives = 114/213 (53.52%), Query Frame = 1 Query: 40 WAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNV-GPYLRDAAAAVLGEGDLQTQGKAIVAAFLCSCAILKTFLGPEFNPFTPIHNAMYTITGIP 675 W LVL F F GG + P G+ PV+FVNDL+VPLV L W L H V +L + ++ L E++RA S+ V + + + G YPI + GP+ +GT+SG G F+P D+G+ L G P L++ F+++ DP + G YLR A L + + KA+ F + A L GP++NPFTP+H +Y + GIP Sbjct: 53 WLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTR--VGGLLQTSPCKFLLVALFEIYRAASILKTVGQAATDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPE---NLKALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIP 260
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A7S2SKA8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA8_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.770e-33 Identity = 84/238 (35.29%), Postives = 121/238 (50.84%), Query Frame = 1 Query: 4 RKGEKADRKPIFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEG--VVFSILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNVGPYLRDAAAAVLGEGDLQTQGKAIVAAFLCSCAILK-TFLGPEFNPFTPIHNAMYTITGIPKPAAGGTPRTE 708 R+ E+ + FW SLV T +GGGI+ P +LG P ND + LV W H V + + N+ V++ + + E R N + ++NS L YPIP+WGPI G ISGC G F+ GL ++ W ++S+FY +A+++I V DP VGP L + G L + I A L + A+L+ F G FNPF P+H+ +Y ITG PA T +E Sbjct: 87 RRQERVQAERYFWLNSLVRTAIACYGGGIIVPMMLGMKPFPIENDAAITLVLFSWWTLHGTPAPLVTWVLDNSTVLRCFLFFIFEALRCNVVVKWCIIANSMLAPSVHYPIPIWGPILCGGISGCFGGFILGGVGL--VQSEVSWLIQSSFYAAAYYHITVNDPIVGPILGKLHISGAGSDPLVARMTCIFA--LGAVAVLQEAFFGAHFNPFAPVHHLLYKITGAHNPAHAETGESE 320
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: D7FML9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML9_ECTSI) HSP 1 Score: 110 bits (275), Expect = 1.240e-22 Identity = 64/217 (29.49%), Postives = 106/217 (48.85%), Query Frame = 1 Query: 115 PPVVFVNDLIVPLVTLCWILSHRAEGVVFSILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNV-GPYLRDAAAAVLGEGDLQTQGKAIVAAFLCSCAILKTFLGPEFNPFTPIHNAMYTITGIPKPAAG-----GTPRTEKPKED*NNVSWRE 747 PP+ NDL+V + + ++ S + V + + P + + + +L+ R N +C +V + + YPI L+GPI +G G GG +P DKGL + PW ++ F + F+++ D + G +R A E + + I F +++T+ P+FNPFTP H A+YT+TG+PK A TP T+ K N + E Sbjct: 4 PPLFLNNDLLVTCIMVFFLFSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHVVANDTYILGGMVRGALGL---ENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQALYTVTGMPKTAITIEVPRSTPSTDADKAKDNGGNGAE 217
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A7S1VWR2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1VWR2_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.030e-16 Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 16 KADRKPIFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILN-APVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFV 480 KA K + L+ GGGIL P L K PV ND P+ L H VV ++N +PVV+ ++ V E+ RA + +++++ A + PL+GPI GT++GCGG FLP++KGL + G P+ SAF G+ ++F+ Sbjct: 52 KAVPKTASVSYKLISMILACTGGGILVPIFLNKVPVPLANDAY-PIAILTSFAIHYYFPVVAEVMNLSPVVKSLVVVFYELIRAKVVLTFTLAASAAI-APTTFSFPLFGPIMCGTVAGCGGAFLPMNKGLDPITSGLQPPMSSAFVGATLVHLFL 205
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A7S1BM49_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM49_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.140e-16 Identity = 63/204 (30.88%), Postives = 97/204 (47.55%), Query Frame = 1 Query: 1 VRKGEKADRKPIFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNVGPYLRDAAAAVLGEGDLQTQGKAIVAAFLCSCAILKTFL 612 V K P+F SL L GGGIL P L PV +D+ + + + + L R + +Q ++ VL E RA +C + ++ A P PL+GPI GT+SGCGG F+PL KGL+ + G P P ++A G+A +++FV L D G D +G+ +VA+F S +++ + Sbjct: 68 VFKSVNPKASPVFKLLSLTLA---CTGGGILVPIFLNSIPVPLASDVYIVAILISFALHSRFPILRELFSKNIALQLILIVLYETTRAGVVCKFTKKAGETILASW-LPYPLFGPIMCGTVSGCGGAFMPLSKGLEPTRAGMPKPAKTALIGAAAYHLFV-----NTKLTD------GVIDAPQKGQVLVASFFISVSLVDLLM 256
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A1E7EP48_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP48_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 6.940e-16 Identity = 71/205 (34.63%), Postives = 99/205 (48.29%), Query Frame = 1 Query: 10 GEKADRKPIFWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFSILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFFNIFVFDPNVG-----PYLRDAAAAVLGEGDLQTQGKAIVAAFLCSCAILKTF 609 G ++ K F A L+ GGGIL P L PV D P+ IL R+ V S L+A + ++ V E R + V L+ S++ A + P++GPI GTI GCGG FLP DKGL +K G P P+ +AF G+ FF++F G P++ D + + D +GK IVA + IL TF Sbjct: 73 GNSSNEKKKFSAYKLITMILACTGGGILVPIFLNTIPVTIAIDAY-PIA----ILQSRS---VVSHLSA-ITNALMVVFYETIRTYVVTLFVGLAASTI-APSQFSFPVFGPIICGTIGGCGGAFLPFDKGLAPIKDGLPPPVFTAFTGATFFHLFTHYTKNGNDTGIPFVDDVLDQL--QIDAPKKGKVIVALWF----ILYTF 261
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Match: A0A7S1RES9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RES9_ALECA) HSP 1 Score: 87.4 bits (215), Expect = 2.760e-15 Identity = 45/153 (29.41%), Postives = 76/153 (49.67%), Query Frame = 1 Query: 37 FWAESLVLTFFLAFGGGILAPFLLGKPPVVFVNDLIVPLVTLCWILSHRAEGVVFS---ILNAPVVQQVIQVLAEVFRANSLCGMVALSNSSLKAGKDYP------IPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPWPLESAFYGSAFF 468 FW ++LV T AFGGG LAP ++ PV + + W ++H V + I + V+ +L +F+ + G + L+ ++ P +P+ GP+ G + GCGG FLP DKGL+ ++ G WP+ +AF+ + + Sbjct: 108 FWPKALVTTAIAAFGGGFLAPLIVAHCPVPLREETFFWFLVFAWYVTHHVPVVSVTWCEIAKSKAGWTVLTILFGIFKTQQIVGSIELAAKAVDHEPLMPHSRYFFVPMAGPLVCGFLGGCGGAFLPFDKGLRPIEEGKQWPVSAAFFATVIY 260 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.58.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.58.1 >prot_F-serratus_M_contig10.58.1 ID=prot_F-serratus_M_contig10.58.1|Name=mRNA_F-serratus_M_contig10.58.1|organism=Fucus serratus male|type=polypeptide|length=149bp MVALSNSSLKAGKDYPIPLWGPIFLGTISGCGGLFLPLDKGLKGLKHGAPback to top mRNA from alignment at F-serratus_M_contig10:244186..248492+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.58.1 ID=mRNA_F-serratus_M_contig10.58.1|Name=mRNA_F-serratus_M_contig10.58.1|organism=Fucus serratus male|type=mRNA|length=4307bp|location=Sequence derived from alignment at F-serratus_M_contig10:244186..248492+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:244186..248492+ >mRNA_F-serratus_M_contig10.58.1 ID=mRNA_F-serratus_M_contig10.58.1|Name=mRNA_F-serratus_M_contig10.58.1|organism=Fucus serratus male|type=CDS|length=894bp|location=Sequence derived from alignment at F-serratus_M_contig10:244186..248492+ (Fucus serratus male)back to top |