mRNA_F-serratus_M_contig10.56.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig10.56.1
Unique NamemRNA_F-serratus_M_contig10.56.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A2R5GA97_9STRA (Aspartate beta-hydroxylase domain-containing protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GA97_9STRA)

HSP 1 Score: 222 bits (566), Expect = 4.180e-64
Identity = 104/211 (49.29%), Postives = 145/211 (68.72%), Query Frame = 2
Query:   92 YYDWREVYPELEVLVRGIADIATECNQVAA--WKAWPE-KHY---DEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSD----GPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAFR*NL 694
            YYDWRE +PE++ L+    ++  E   + +  W  WPE K Y   D+ G  DWKV P MHTFPA+D  R   +E  C  CP T +LL+++P +RT L+SRLG  +R++ HQGWADLAN+VLRCHLPL +P+D    G CG+WV+GEI+ H E +++VFDDSK+HKA+N S  +R++LI D++RP  +P G+A G HT +LD FI  +  +L
Sbjct:  170 YYDWREYFPEVQGLLDHFDELVEEMKTLTSGRWCPWPEYKLYQAEDQFG--DWKVIPLMHTFPAWDSKRTKLIEGNCKACPLTMSLLKKIPGLRTVLYSRLGPRTRLSSHQGWADLANYVLRCHLPLVLPTDEKFRGSCGMWVEGEIQKHKERDVLVFDDSKMHKAYNASEEERIILIFDVVRPDQLPKGLASGGHTEQLDEFIAQYEASL 378          
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: H3HC85_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3HC85_PHYRM)

HSP 1 Score: 224 bits (572), Expect = 4.170e-63
Identity = 116/226 (51.33%), Postives = 146/226 (64.60%), Query Frame = 2
Query:   35 GEWVPLARAGEPRREKTANYYDWREVYPELEVLVRGIADIATEC---NQVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVP--SDGP--CGLWVDGEIRHHAEGEIIVFDDSKLHKAFN---DSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682
            G+ V  +   E + +   NYY ++E++P+L++L      I  E     Q+A W  WPEKHY EG + +W+VFPF +TFPAYD S+  WV  TC+ CP T  LLR LP +RTALFS+LG  + ++ H+GWADLANHVLRCH PL VP  S G   C + V GE  +HAE E IVFDDSKLH AFN   D T  RLVLI+D  RP  +P G A G H+ ELD FI+ F
Sbjct:  332 GDSVGYSSDEEIQDDDVPNYYPYQELFPQLDILKDNYNVILEEMMAVQQMATWPFWPEKHYTEGDS-EWRVFPFCYTFPAYDASKTAWVSPTCSMCPRTAELLRSLPGIRTALFSKLGPNTTLSAHRGWADLANHVLRCHFPLVVPRLSTGAPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNHHPDKT--RLVLIIDFYRPDQLPRGRARGGHSDELDEFIETF 554          
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: V9FJW8_PHYPR (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=V9FJW8_PHYPR)

HSP 1 Score: 224 bits (571), Expect = 9.370e-63
Identity = 111/224 (49.55%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   35 GEWVPLARAGEPRREKTANYYDWREVYPELEVLVRGIADIATECN---QVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVP----SDGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGD-RLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682
            G+ +  +   E + +   NYY ++E++P+L+ L      I  E     Q+A W  WPEKHY EG + +W+VFPF +TFPAYD S+ TWV +TC+ CP T  +L+ LPN+RTALFS+LG  + +  H+GWADLANHVLR H PL VP     D  C + V GE  +HAE E IVFDDSKLH AFN    + RLVLI+D  RP  +P G A G H+ ELD FI+ F
Sbjct:  355 GDGLDYSSDEEIQDDDAPNYYPYQELFPQLDTLKDNYNVILEEMQAVQQMATWPFWPEKHYTEGDS-EWRVFPFCYTFPAYDASKTTWVSTTCSMCPRTAEILKSLPNIRTALFSKLGPNTTLTAHRGWADLANHVLRVHFPLVVPRLPNGDPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNHHPDETRLVLIIDFYRPDQLPRGRARGGHSDELDEFIETF 577          
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A4D9CPQ7_9STRA (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPQ7_9STRA)

HSP 1 Score: 220 bits (560), Expect = 9.700e-63
Identity = 107/208 (51.44%), Postives = 136/208 (65.38%), Query Frame = 2
Query:   89 NYYD-WREVYPELEVLVRGIADIATECNQVAAWKAWPEKHYDEGG-NHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRL-PNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSDGP-----CGLWVDGEIRHHAEGEIIVFDDSKLHKAFN-DSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAFR 685
            NYYD WR  YP L +L+     +  E   V++W  WPE H+ +GG  +DW+V PF+HTFPA D     W+ STC RCPA   +L+ L P +RTAL SRLG  +R++ H GW DLANHVLR HL L  P  G      CG WV+GE+R H E + IVFDDSK+HKAFN   T  R+VLI+D++RP ++  G+A G HT ELD FI AF+
Sbjct:  223 NYYDDWRRHYPALRLLLENFDTLRAEAAGVSSWTPWPEYHFRDGGMENDWRVVPFLHTFPATDPGASKWIPSTCARCPAIVQVLQSLRPALRTALLSRLGPDTRLSAHTGWEDLANHVLRVHLTLVAPPPGSNGIGSCGTWVEGEVRCHRERDFIVFDDSKVHKAFNLHPTESRIVLIMDLVRPKYVEAGVAVGGHTEELDKFISAFQ 430          
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A0P1ARI1_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARI1_PLAHL)

HSP 1 Score: 221 bits (562), Expect = 9.100e-62
Identity = 113/231 (48.92%), Postives = 147/231 (63.64%), Query Frame = 2
Query:   26 NISGEW----VPLARAGEPRREKTANYYDWREVYPELEVLVRGIADIATECN---QVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPS----DGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDST-GDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682
            +I  EW    V  +   E + +   NYY +++++P+L+ L +    I  E     ++A W  WPEKHY+EG + +W+VFPF +TFPA+D S+ TWV STC  CP TT +L+ LPN+RTALFS+LG    +  H+GWADLANHVLR H PL VP+    D  C + V GE  +H+E + IVFDDSKLH AFN      RLVLIVD  RP  +P G A G HT ELD FI+ F
Sbjct:  315 DIQQEWIDESVDSSSDEEIQDDDMPNYYPYQDLFPQLDRLKKNFDVILKEMQAVQEIAKWPFWPEKHYNEGDS-EWRVFPFCYTFPAFDASKTTWVPSTCLMCPRTTEILKSLPNIRTALFSKLGPNMTLTAHRGWADLANHVLRVHFPLIVPTLFNGDPCCAMVVGGETCYHSERKFIVFDDSKLHYAFNHHPEATRLVLIVDFYRPDHLPKGRARGGHTDELDEFIENF 544          
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A1V9Y5K0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5K0_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.640e-61
Identity = 106/206 (51.46%), Postives = 139/206 (67.48%), Query Frame = 2
Query:   80 KTANYYDWREVYPELEVLVRG---IADIATECNQVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVP-SDGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDS-TGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682
            K  +YYD+ E+YPEL +L      I D A +      W  WPE HY  G + +W+VFP  +TFPA+D S+ TWV +TC +CPAT ALLR++P +RTALFS LG  + +  H+GWADLAN +LRCH+ L VP  +  C + VDGE R  A G ++VFDDSKLH AFN+  T  R +LIVD+ RP+ +P G+A G HT ELDAFI+ +
Sbjct:  295 KNPSYYDFEEIYPELRLLQANYEVIRDEALQAQLAHDWPNWPEDHYI-GEDGEWRVFPLCYTFPAWDASKTTWVGATCAQCPATVALLRQIPGLRTALFSNLGPQTTLGAHRGWADLANDILRCHVGLAVPPGEDTCCIVVDGEARAQANGRVLVFDDSKLHYAFNNHPTASRCILIVDLYRPAHLPRGMARGGHTDELDAFIEQY 499          
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A3M6VNQ2_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNQ2_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.060e-61
Identity = 112/216 (51.85%), Postives = 143/216 (66.20%), Query Frame = 2
Query:   65 EPRREKTANYYDWREVYPELEVLVRGIADIATECN---QVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVP--SDGP--CGLWVDGEIRHHAEGEIIVFDDSKLHKAFN---DSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682
            E + +   NYY ++E++P+L++L      I  E     ++A W  WPEKHY EG + +W+VFPF +TFPA D S+  WV STC+ CP T  LL  LP +RTALFS+LG  + ++ H+GWADLANHVLR H PL VP  S+G   C + V GE  +HAE E IVFDDSKLH AFN   D+T  RLVLIVD  RP  +P G A G H+ ELD FI++F
Sbjct:  292 EIQDDDVPNYYSYQELFPQLDILKDNYNVILEEMQAVQEIATWPFWPEKHYTEGSS-EWRVFPFCYTFPASDASKTAWVSSTCSMCPRTAELLNNLPGIRTALFSKLGPNTTLSAHRGWADLANHVLRVHFPLIVPTLSNGEPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNQHPDAT--RLVLIVDFYRPDQLPRGQARGGHSDELDEFIESF 504          
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A5D6XW97_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW97_9STRA)

HSP 1 Score: 219 bits (559), Expect = 3.110e-61
Identity = 108/206 (52.43%), Postives = 141/206 (68.45%), Query Frame = 2
Query:   89 NYYDWREVYPELEVLVRGIADIATECNQV---AAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPS--DGP--CGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGD-RLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682
            N+Y +RE+YP+LEVL      I  E  +V   +AW  WPEKHY EG N +W+VFPF +TFPA+D ++  WV +TC  CP T  +LR +P +RTALFS+LG G+ +  H+GWADL+NH+LRCHL L VP+  +G   C + V GE+  H E E++VFDDSKLH AFN      R+VLIVD+ RP  +P G A+G H+ ELD FID F
Sbjct:  350 NFYAYRELYPQLEVLKDKYDVIVDEMQRVLQSSAWPFWPEKHYAEGDN-EWRVFPFCYTFPAHDATKTAWVPATCAMCPRTVGILRGIPGIRTALFSKLGPGTTLTAHRGWADLSNHILRCHLGLTVPTFENGKPCCSMVVGGELGPHRERELLVFDDSKLHYAFNKHHEQTRVVLIVDLYRPDHLPRGRAKGGHSDELDEFIDTF 554          
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: K3WA84_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA84_GLOUD)

HSP 1 Score: 218 bits (556), Expect = 7.470e-61
Identity = 108/206 (52.43%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   89 NYYDWREVYPELEVLVRGIADIATECNQV---AAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPS----DGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGD-RLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682
            NYY+++E+YP+LEVL    A I  E   V   + W  WPEKHY EG N +W+VFPF +TFPAYD S+  WV  TC  CP T  +L+ +P +RTALFS+LG G+ +  H+GWADL+NH+LRCHL L VP+       C + V GE   H E  IIVFDDSKLH A+N    D R+VLI+D+ RP  +P G A+G H+ ELD FID F
Sbjct:  342 NYYEYKELYPQLEVLKDNYAVILEEMQAVLQSSTWPFWPEKHYAEGDN-EWRVFPFCYTFPAYDASKTMWVPPTCEMCPRTVEVLKSIPGIRTALFSKLGPGTTLTAHRGWADLSNHILRCHLGLVVPTLDHGKPCCSMVVGGERCAHQERGIIVFDDSKLHFAYNHHDEDTRIVLIIDLYRPDHLPRGRAKGGHSDELDEFIDTF 546          
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A6A4BKH8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4BKH8_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.550e-60
Identity = 112/216 (51.85%), Postives = 140/216 (64.81%), Query Frame = 2
Query:   65 EPRREKTANYYDWREVYPELEVLVRGIADIATEC---NQVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPS---DGPC-GLWVDGEIRHHAEGEIIVFDDSKLHKAFN---DSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682
            E + +   NYY ++E +P+LE+L      I  E     Q+A W  WPEKHY EG + +W+VFPF +TFPAYD ++ TWV  TC+ CP T ALL+ LP +RTALFS+LG  + +  H+GWADLANHVLR H PL VP+     PC  + V GE  +HAE E IVFDDSKLH AFN   D T  R VLI+D  RP  +P G A G H+ ELD FI+ F
Sbjct:  339 EIQDDDAPNYYPYQEFFPQLEILKDNYNVILEEMMAVQQIATWPFWPEKHYAEGDS-EWRVFPFCYTFPAYDATKTTWVAPTCSMCPRTAALLKSLPGIRTALFSKLGPNTTLTAHRGWADLANHVLRVHFPLVVPTLPTGAPCCAMVVGGETTYHAEREFIVFDDSKLHYAFNHHPDKT--RHVLIIDFYRPDELPRGRARGGHSDELDEFIETF 551          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5GA97_9STRA4.180e-6449.29Aspartate beta-hydroxylase domain-containing prote... [more]
H3HC85_PHYRM4.170e-6351.33Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
V9FJW8_PHYPR9.370e-6349.55Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A4D9CPQ7_9STRA9.700e-6351.44Asp_Arg_Hydrox domain-containing protein n=2 Tax=M... [more]
A0A0P1ARI1_PLAHL9.100e-6248.92Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A1V9Y5K0_9STRA1.640e-6151.46Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A3M6VNQ2_9STRA2.060e-6151.85Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A5D6XW97_9STRA3.110e-6152.43Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WA84_GLOUD7.470e-6152.43Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6A4BKH8_9STRA1.550e-6051.85Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:223102..225811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score270.4
Seed ortholog evalue5e-70
Seed eggNOG ortholog2880.D7FJE5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Aspartyl/Asparaginyl beta-hydroxylase
EggNOG OGs2S66E@2759,COG3555@1
Ec32 ortholog descriptionIsopenicillin N synthase-like
Ec32 orthologEc-14_006050.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1520
Cds size441
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.56.1prot_F-serratus_M_contig10.56.1Fucus serratus malepolypeptideF-serratus_M_contig10 223934..224846 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928781.9586434-UTR-F-serratus_M_contig10:223101..2239331622928781.9586434-UTR-F-serratus_M_contig10:223101..223933Fucus serratus maleUTRF-serratus_M_contig10 223102..223933 -
1690962568.1893253-UTR-F-serratus_M_contig10:223101..2239331690962568.1893253-UTR-F-serratus_M_contig10:223101..223933Fucus serratus maleUTRF-serratus_M_contig10 223102..223933 -
1622928781.9923441-UTR-F-serratus_M_contig10:224846..2248581622928781.9923441-UTR-F-serratus_M_contig10:224846..224858Fucus serratus maleUTRF-serratus_M_contig10 224847..224858 -
1690962568.2149956-UTR-F-serratus_M_contig10:224846..2248581690962568.2149956-UTR-F-serratus_M_contig10:224846..224858Fucus serratus maleUTRF-serratus_M_contig10 224847..224858 -
1622928782.0034702-UTR-F-serratus_M_contig10:225576..2258111622928782.0034702-UTR-F-serratus_M_contig10:225576..225811Fucus serratus maleUTRF-serratus_M_contig10 225577..225811 -
1690962568.2226212-UTR-F-serratus_M_contig10:225576..2258111690962568.2226212-UTR-F-serratus_M_contig10:225576..225811Fucus serratus maleUTRF-serratus_M_contig10 225577..225811 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928781.9690886-CDS-F-serratus_M_contig10:223933..2241221622928781.9690886-CDS-F-serratus_M_contig10:223933..224122Fucus serratus maleCDSF-serratus_M_contig10 223934..224122 -
1690962568.199054-CDS-F-serratus_M_contig10:223933..2241221690962568.199054-CDS-F-serratus_M_contig10:223933..224122Fucus serratus maleCDSF-serratus_M_contig10 223934..224122 -
1622928781.9790967-CDS-F-serratus_M_contig10:224594..2248461622928781.9790967-CDS-F-serratus_M_contig10:224594..224846Fucus serratus maleCDSF-serratus_M_contig10 224595..224846 -
1690962568.2070818-CDS-F-serratus_M_contig10:224594..2248461690962568.2070818-CDS-F-serratus_M_contig10:224594..224846Fucus serratus maleCDSF-serratus_M_contig10 224595..224846 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig10.56.1

>prot_F-serratus_M_contig10.56.1 ID=prot_F-serratus_M_contig10.56.1|Name=mRNA_F-serratus_M_contig10.56.1|organism=Fucus serratus male|type=polypeptide|length=147bp
MHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIA
GHQGWADLANHVLRCHLPLRVPSDGPCGLWVDGEIRHHAEGEIIVFDDSK
LHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAFR*
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mRNA from alignment at F-serratus_M_contig10:223102..225811-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig10.56.1 ID=mRNA_F-serratus_M_contig10.56.1|Name=mRNA_F-serratus_M_contig10.56.1|organism=Fucus serratus male|type=mRNA|length=2710bp|location=Sequence derived from alignment at F-serratus_M_contig10:223102..225811- (Fucus serratus male)
GGAATCAGCTCGGGGGGGTGGGTTCAACATTTCCGGCGAGTGGGTTCCGC TGGCGCGAGCGGGCGAGCCACGTCGAGAAAAGACTGCCAACTACTACGAC TGGAGGGAGGTTTACCCTGAGCTGGAGGTTCTCGTGCGTGGCATTGCAGA CATCGCGACCGAGTGCAATCAGGTGGCTGCCTGGAAGGCCTGGCCTGAGA AGCATTACGACGAGGGAGGGAACCACGACTGGAAGGTGATCCGCTTTCGG GGGTTAACGCTGCTGCTAGACAGCGATAGAGTCTTTGCCGCAGGGGTCAA CTCTCATCGAAAGCCGTTCGATTTTGCCGTGGGTTTTCTTGCGTAACATA TTGTTATTTCCCCTACGTTTTCGCGTTTTTGTGCCATCCCTGCACCACTT ACTGCTGTGCAGTACCACGACTATAGTTATTGTATCTCGAAGCGAAAGAA GCGCGCGCTCCGACTCGAAACGCGTGAGCCGCCGATAAGTTGCAGTTGTA GTTTCTCGGCAGCCGTCTCTTATTACTTCGGATGGATGCCGCCTGGCAAT TTTTCCCGTTCGCGTGACATATATTGCAGTTGTGTCTCTCATAACAACAC TCAGCAATCGACGATGGCGGCTTTGCTTTGTTCCGGGAACCACATGCGTG TATTGATTTGCCCCGCTGGTCGTCCGAAAGCTTGAGCGGTTGGCGATTAA AAATTTCACCCGCTTCGTCCTAGTTCATCCTGACTCCGTCTCGTAGAACA TACACCAGTGCGTCGACACCGCCGTGACTAGCTCGAGAACGTCTTCTATC CCATAAGCCTCCGTTTCCCGCACCCCACCACGTTTGCCTCCTCCACTGAA TCCAATCGCTTGGTGCAGTAGACTATGGTATAGTATAGTATAGTGATCTT GTTCGCACGATGCTACGAACGACTACATTTCTCTTATTTTCCCAAACGTG AAGGTGTTTCCCTTCATGCACACGTTCCCTGCGTACGACGAGTCTCGGCG AACGTGGGTGGAGAGCACGTGCACGCGTTGCCCGGCCACAACGGCCCTGC TGCGGCGCCTGCCCAACGTTCGTACTGCGCTCTTCTCTCGGCTTGGGAGT GGGTCGCGTATCGCGGGACATCAGGGCTGGGCCGACCTCGCGAATCACGT CCTGCGATGCCACCTACCGCTGAGGGTGCCCTCGGACGGCCCGTGTGGCC TCTGGGTGGATGGAGAGGTAAATGGGCGGATTTGACGGAGTCCTTGAATC ATTGAATTCATTTTCTGGTTGTGATATTTCCCCCGAGTCCGAATCGTGTG TATCCGTTGTAGAGAAAAGTCGGCGCCGAGCGAAGGTAAATAACGCGATC TCGAGGGCTGCGTACAGTAGCTTTTGTTAAGCATCGCGCTCTCCGTTCTA GTTGCCTATGTGGACGACACAGATATGAAGAACGCGAACCACTTTTCGCC GAGACTCGGTCGAAATGTGCTTTATTGCGATCGTGGCGTGTACCATGGGT TGGCTTGCTGCATATCATGTCTCCCACGATCTGGTTCGAGAATCCCGTTC TCTACAAATGGACGGTCCTCGCTATCAAGCGTAGACCGTTCTGGTGCAGG TGAATGCGTTATTCTCCCCCCCCATCCGTTATCCCAACCTTCCAACCTTG AAACCCATTCTTTGTCTCGCTACTCTCGTCCGGCCGCAGATTCGCCACCA CGCGGAAGGCGAAATAATTGTTTTCGACGACAGCAAGCTGCACAAGGCGT TCAATGATTCCACCGGAGACAGGCTTGTACTGATCGTCGACATGCTCAGA CCATCGTGGATACCCCTGGGAATCGCTGAAGGGGAGCACACGCCAGAGCT TGACGCTTTCATCGACGCCTTCAGATAGAACCTCTCGTTCGTTTTGCGCT CGCGCGTTTCCCTCGCTGTTGATGTCCCCGTGATCTAGGGTCGTGGGATG TCGTGCAGTAGGGTTGTCGTGCCGTGGGATGTCGTGCCGCGGGATGTCGT GCCGCGGGATGTCGTGCCGCGGGATGTCGTGCCGCGGGAGGTGGCACTGT TCGCCGCTGGAGGCTGCGACCCGGACTCGATGTCGTGCGCCGCCTGGAGT CGTGTGCTGCTGCTGCCGAAGAAAGAAACGGACGCTGACGAGGGAAAAGC AAAGGTGGTGTCTAGTTGTTGCTTTCACGTCAAGATCGAGGATACGTTGG TAAACTTCCGCGTCTTTGACCTGTCCCCCGGCATCTTTCGATGCGCTTGA GCCGCTTACCAGGATGAACATTTTACACTATATCGCGGCGTCGTTATCGG GACGTCCTTCGACCGCAGGGAGCCACCCGTCCTTTGTAAATGAAAAATAG TTTTCCTCGCTGGCGATGTTGTGACGCTCGCAAAGAAATCTAAACTGCGG GGGTTCGGATCCTCCACCTGTTGGTGTTGCAGGGTTTTTGTTCGGTGTAA TGTGTAGTTAAGTGCGTTTCCCCCTCCTAGAAATAAGAAAAGTAATAGTG TTCAGGGAGGCTCGGTTATGGGTGGAGTCGCCCCCGTGCGTCCCTTTCAG CCAATGAATATCCTTGAATATCCTTGTACTCATGGTGATTGGACGAAAGC AAACGATCAATTCGCCGACGCAGTCCCAAGTTGGCTCGATCCTTTTGTGG TTTGTTTTCCCCGTTTTGGGCGACAAACGAATATAGATGTAGAGGATAGT AGTGTACCAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig10:223102..225811-

>mRNA_F-serratus_M_contig10.56.1 ID=mRNA_F-serratus_M_contig10.56.1|Name=mRNA_F-serratus_M_contig10.56.1|organism=Fucus serratus male|type=CDS|length=882bp|location=Sequence derived from alignment at F-serratus_M_contig10:223102..225811- (Fucus serratus male)
ATGCACACGTTCCCTGCGTACGACGAGTCTCGGCGAACGTGGGTGGAGAG
CACGTGCACGCGTTGCCCGGCCACAACGGCCCTGCTGCGGCGCCTGCCCA
ACGTTCGTACTGCGCTCTTCTCTCGGCTTGGGAGTGGGTCGCGTATCGCG
GGACATCAGGGCTGGGCCGACCTCGCGAATCACGTCCTGCGATGCCACCT
ACCGCTGAGGGTGCCCTCGGACGGCCCGTGTGGCCTCTGGGTGGATGGAG
AGATGCACACGTTCCCTGCGTACGACGAGTCTCGGCGAACGTGGGTGGAG
AGCACGTGCACGCGTTGCCCGGCCACAACGGCCCTGCTGCGGCGCCTGCC
CAACGTTCGTACTGCGCTCTTCTCTCGGCTTGGGAGTGGGTCGCGTATCG
CGGGACATCAGGGCTGGGCCGACCTCGCGAATCACGTCCTGCGATGCCAC
CTACCGCTGAGGGTGCCCTCGGACGGCCCGTGTGGCCTCTGGGTGGATGG
AGAGATTCGCCACCACGCGGAAGGCGAAATAATTGTTTTCGACGACAGCA
AGCTGCACAAGGCGTTCAATGATTCCACCGGAGACAGGCTTGTACTGATC
GTCGACATGCTCAGACCATCGTGGATACCCCTGGGAATCGCTGAAGGGGA
GCACACGCCAGAGCTTGACGCTTTCATCGACGCCTTCAGATAGATTCGCC
ACCACGCGGAAGGCGAAATAATTGTTTTCGACGACAGCAAGCTGCACAAG
GCGTTCAATGATTCCACCGGAGACAGGCTTGTACTGATCGTCGACATGCT
CAGACCATCGTGGATACCCCTGGGAATCGCTGAAGGGGAGCACACGCCAG
AGCTTGACGCTTTCATCGACGCCTTCAGATAG
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