mRNA_F-serratus_M_contig10.56.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A6H5L3R0_9PHAE (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3R0_9PHAE) HSP 1 Score: 381 bits (979), Expect = 5.180e-127 Identity = 171/227 (75.33%), Postives = 199/227 (87.67%), Query Frame = 2 Query: 5 SARGGGFNISGEWVPLARAGEPRREKTANYYDWREVYPELEVLVRGIADIATECNQVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSDGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAFR 685 SA G +S E V + AGE ++ T NYYDW+ ++PEL+VLV G+++IA EC QVAAWKAWPEKHYDEGG DWKVFPF+HTFPAYDE+RRTW++STC RCPAT A+LRRLPN+RTALFSRLG GSRI+GH+GWADLANHVLRCHLPL+VPSDGPCGLWV+ E+RHH EGEIIVFDDSKLHKAFN+S+G+RLVLIVD+LRP +PLG A+GEHTPELDAFIDAFR Sbjct: 85 SASGQALILSEELVVIGAAGEVPQDDTPNYYDWQYLFPELKVLVDGLSEIAAECAQVAAWKAWPEKHYDEGGGQDWKVFPFVHTFPAYDEARRTWIDSTCGRCPATAAILRRLPNIRTALFSRLGGGSRISGHRGWADLANHVLRCHLPLKVPSDGPCGLWVNEEVRHHVEGEIIVFDDSKLHKAFNESSGERLVLIVDILRPPGVPLGTADGEHTPELDAFIDAFR 311
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: D7FJE5_ECTSI (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE5_ECTSI) HSP 1 Score: 279 bits (714), Expect = 2.180e-89 Identity = 124/151 (82.12%), Postives = 142/151 (94.04%), Query Frame = 2 Query: 233 KVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSDGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAFR 685 +VFPF+HTFPAYDE+RRTW++STC RCPAT A+LRRLPN+RTALFSRLG GSRI+GH+GWADLANHVLRCHLPL+VPSDGPCGLWV+ E+RHH EGEIIVFDDSKLHKAFN+S+ +RLVLIVD+LRP +PLG A+GEHTPELDAFIDAFR Sbjct: 5 RVFPFVHTFPAYDEARRTWIDSTCGRCPATAAILRRLPNIRTALFSRLGGGSRISGHRGWADLANHVLRCHLPLKVPSDGPCGLWVNEEVRHHVEGEIIVFDDSKLHKAFNESSEERLVLIVDILRPPGVPLGTADGEHTPELDAFIDAFR 155
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A7S2UZL3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZL3_9STRA) HSP 1 Score: 275 bits (702), Expect = 8.000e-86 Identity = 125/201 (62.19%), Postives = 156/201 (77.61%), Query Frame = 2 Query: 92 YYDWREVYPELEVLVRGIADIATECNQVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSDGP--CGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFID-AFR 685 +YDWR+ YPEL++L+ I E + WKAWPE H++EGG DWKVFPF+HTFPA WV TC +CP T +LLR+LPN+RTALFSRLGSG++++ H+GWADLAN VLRCHL L++P D P CG+WV+G+I+HH + EIIVFDDSKLHKAFN S+G+RLVLI DM+RP+ IP G A+G HTPELD FI+ AFR Sbjct: 76 FYDWRQYYPELQLLIDNFDQILEEAQSLIGWKAWPEYHFEEGGGDDWKVFPFLHTFPATSPENAVWVGPTCRKCPKTVSLLRQLPNLRTALFSRLGSGTKLSTHRGWADLANFVLRCHLSLKIP-DPPESCGVWVEGQIQHHRDKEIIVFDDSKLHKAFNTSSGERLVLIFDMIRPNDIPQGRAKGPHTPELDNFIEKAFR 275
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A6V1W3Q8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W3Q8_HETAK) HSP 1 Score: 267 bits (682), Expect = 3.970e-83 Identity = 121/197 (61.42%), Postives = 144/197 (73.10%), Query Frame = 2 Query: 92 YYDWREVYPELEVLVRGIADIATECNQVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSDGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682 YYDWRE+YP+L+VL+ DI E V W AWPE H+ EGGN+DWKVFPF + FPA DESR WVE TC+ CP T +L+++P +RTALFSRLG G+R++ H GW DLANHVLR HL LRVP G CGLWV+G++ H +I VFDDSK HKAFNDS +RLVLIVD+ RP +P G A G HT ELD FI AF Sbjct: 57 YYDWRELYPQLQVLIDNYEDILQEAEAVTGWHAWPEYHFREGGNNDWKVFPFAYCFPADDESRLAWVEKTCSYCPKTVEVLKQIPGLRTALFSRLGPGTRLSTHTGWEDLANHVLRAHLGLRVPPGGRCGLWVEGKVELHEARQINVFDDSKRHKAFNDSAEERLVLIVDLARPEGVPRGRAVGGHTAELDRFIGAF 253
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A7S2SV16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV16_9STRA) HSP 1 Score: 256 bits (653), Expect = 2.210e-76 Identity = 115/208 (55.29%), Postives = 152/208 (73.08%), Query Frame = 2 Query: 65 EPRREKTANYYDWREVYPELEVLVRGIADIATECNQV--AAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSDGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682 E E +++ WR VYPEL++LV + I + ++ ++WK WPE HY +GG+ DWK+FPF HTFPA+D +RR ++E TC CP T +LL++LP+VRTALFSRLG RI+ H+GWADLANHVLRCHL L VP C +WV GE++ H EG +IVFDDSKLHKA N++ DR+VLIVD+ RP+ +PLG A G+ TPEL+ I+ F Sbjct: 228 EGELEPLQSFHSWRAVYPELQLLVDHLDVILADARRIQGSSWKPWPEMHYSDGGSEDWKIFPFCHTFPAHDITRRCFIEGTCEFCPGTASLLKQLPSVRTALFSRLGGKGRISAHRGWADLANHVLRCHLSLVVPEKRGCAVWVRGEVQSHEEGGVIVFDDSKLHKACNETVDDRIVLIVDLARPAHLPLGRAVGDRTPELNNLIEYF 435
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A7S3MI66_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MI66_9STRA) HSP 1 Score: 243 bits (619), Expect = 5.590e-74 Identity = 114/203 (56.16%), Postives = 140/203 (68.97%), Query Frame = 2 Query: 92 YYDWREVYPELEVLVRGIADIATECNQVAAWKAWPEKHYDEG----GNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSDGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDST-GDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAFR 685 +Y+WRE++PELEVL+ IA I E + W WPE H+ G + DW VFP +HTFPAY WV STC RCP T LL+ +P +RTALFSRLG G++++ H GWADLAN+VLRCHL L VP+DG CGL VDGEI++H I+VFDDSK H+AFN+ST +R VLI D+ RP IP G A G HT ELD FI F+ Sbjct: 33 FYNWRELFPELEVLLNNIAVIKEESKSIGQWIPWPEDHFTLGDDVENSKDWTVFPLLHTFPAYCPENSKWVGSTCARCPETVKLLKSIPTLRTALFSRLGPGTKLSSHTGWADLANYVLRCHLCLDVPTDGTCGLLVDGEIQYHRPNHILVFDDSKPHRAFNNSTLNNRTVLIFDLWRPQDIPRGTATGNHTDELDGFISQFK 235
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A836CEF1_9STRA (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF1_9STRA) HSP 1 Score: 243 bits (621), Expect = 9.820e-70 Identity = 122/236 (51.69%), Postives = 150/236 (63.56%), Query Frame = 2 Query: 92 YYDWREVYPELEVLV--RGIADIATECNQV-AAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVP------------------------------------SDGPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682 + DWR+VYPEL +L+ + ++DI E V +AWKAWPE HY EGG+ DWKV PF H FPA D S+ TWV TC CP T ALLR+LP +RTALFSRLG G++I+ H+GW+DLAN VLRCHL L VP SDG CG+WV+G+ R H +GEI+VFDDSKLHKA+N S +R+VLIVD+LRP +P G A T EL+ FI AF Sbjct: 361 FLDWRDVYPELGILLEPQNLSDIMEEMRSVRSAWKAWPETHYSEGGSEDWKVVPFAHCFPACDASKLTWVPHTCAHCPRTVALLRQLPTLRTALFSRLGGGTKISSHRGWSDLANDVLRCHLALVVPPDDPHSRALKGXXXXXXXXXXXXXXXXXXXXXXXXESDGCCGIWVEGQRRAHRQGEIMVFDDSKLHKAYNHSYHERVVLIVDLLRPPHVPRGTARRGMTAELEGFIAAF 596
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A6U0VYJ3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VYJ3_9STRA) HSP 1 Score: 232 bits (592), Expect = 3.390e-69 Identity = 106/210 (50.48%), Postives = 137/210 (65.24%), Query Frame = 2 Query: 89 NYYDWREVYPELEVLVRGIADIATECNQVAAWKAWPEKHYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSDG------------PCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAF 682 ++Y W EVYP L+ L+ +I E + W WPE H+ +GGN +W VFP +TFPA D + W+E C CPATT +LR++P +RTALFSRLG +R++GH GW DLANHVLR HL L VP CG+WV+ E+ H EG+++VFDDS +H A+N S DR+VLI+D+ RP W+P G A G HTPELDAFID F Sbjct: 77 SFYPWEEVYPFLQPLIDCAEEIKAEAKAIPMWAEWPEYHFRDGGNAEWNVFPLTYTFPATDPHAQRWLEQPCGLCPATTRVLRKIPGLRTALFSRLGPQTRLSGHTGWEDLANHVLRVHLSLTVPKRNRKPSGLAGEDLSSCGVWVNEEVWGHQEGQLLVFDDSLVHGAYNHSDEDRVVLIIDIERPPWLPPGRATGGHTPELDAFIDQF 286
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A7S3LIY3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LIY3_9STRA) HSP 1 Score: 225 bits (573), Expect = 2.390e-66 Identity = 106/205 (51.71%), Postives = 138/205 (67.32%), Query Frame = 2 Query: 92 YYDWREVYPELEVLVRGIADIATEC---NQVAAWKAWPEKHYDEGGNHD--WKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSDGP--CGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAFR 685 YYDW++V+PEL+++ I E + W WPE+ G WKV P ++TFPAYDES W+ S CP TT LL+++PN+RTALFSRLG +R++ HQGWADLAN+VLRCHLPL VP CG+WV+G +++H G+++VFDDSK HKAFN S DR+VLI D+LRP IP G+A G HT LD FI +F+ Sbjct: 84 YYDWKKVFPELKIIEDNFKVIQRELVTLMESREWTPWPEERLYNGPQQSGQWKVIPLLYTFPAYDESSSKWITSNNKLCPKTTELLKKIPNIRTALFSRLGGTTRLSQHQGWADLANYVLRCHLPLIVPQPEANLCGMWVEGHVQYHKPGKLLVFDDSKHHKAFNASDQDRMVLIFDILRPKKIPKGLATGGHTEHLDQFISSFQ 288
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Match: A0A7S2RDD1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RDD1_9STRA) HSP 1 Score: 222 bits (566), Expect = 2.680e-65 Identity = 104/203 (51.23%), Postives = 139/203 (68.47%), Query Frame = 2 Query: 92 YYDWREVYPELEVLVRGIADIATECNQVAA--WKAWPEK--HYDEGGNHDWKVFPFMHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAGHQGWADLANHVLRCHLPLRVPSD-GPCGLWVDGEIRHHAEGEIIVFDDSKLHKAFNDSTGDRLVLIVDMLRPSWIPLGIAEGEHTPELDAFIDAFR 685 YYDW+E++P LE ++ A I +E W WPE+ +Y N DWKV P MHTFPA+ ES++T +ES CP T L+ +P +RT LFSRLG +R++ HQGW DLAN+VLRCHLPL VP CG+WV+ E+R+H EI+VFDDSK HKAFN S +R++LI D++RP IP G+A G HT +LD+FI+A++ Sbjct: 85 YYDWKEIFPFLETILENEAVIQSELRNFMQERWCPWPEEKLYYAPDQNGDWKVIPLMHTFPAFCESKKTVIESNGKLCPKTMELMSAIPGIRTVLFSRLGPETRLSCHQGWCDLANYVLRCHLPLIVPKKPNSCGMWVEREVRYHKPKEILVFDDSKFHKAFNASNEERIILIFDIVRPKSIPKGLATGGHTEQLDSFIEAYK 287 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.56.1 >prot_F-serratus_M_contig10.56.1 ID=prot_F-serratus_M_contig10.56.1|Name=mRNA_F-serratus_M_contig10.56.1|organism=Fucus serratus male|type=polypeptide|length=147bp MHTFPAYDESRRTWVESTCTRCPATTALLRRLPNVRTALFSRLGSGSRIAback to top mRNA from alignment at F-serratus_M_contig10:223102..225811- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.56.1 ID=mRNA_F-serratus_M_contig10.56.1|Name=mRNA_F-serratus_M_contig10.56.1|organism=Fucus serratus male|type=mRNA|length=2710bp|location=Sequence derived from alignment at F-serratus_M_contig10:223102..225811- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:223102..225811- >mRNA_F-serratus_M_contig10.56.1 ID=mRNA_F-serratus_M_contig10.56.1|Name=mRNA_F-serratus_M_contig10.56.1|organism=Fucus serratus male|type=CDS|length=882bp|location=Sequence derived from alignment at F-serratus_M_contig10:223102..225811- (Fucus serratus male)back to top |