mRNA_F-serratus_M_contig10.55.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig10.55.1
Unique NamemRNA_F-serratus_M_contig10.55.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig10.55.1 vs. uniprot
Match: D7FV16_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV16_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 5.960e-103
Identity = 214/348 (61.49%), Postives = 243/348 (69.83%), Query Frame = 2 
Query:  146 MTEFKKTSGELDVLENLLLTLLDDPSTSPPDKLATFSTSKARLEGELTQKVEKFRKRLSETDPVSGASRYGESMTTKVTALAAKHEDLLQQLPRVEAAIMAQVSQHDSRMVAVTSEGQKLEAEARLREEALSRIRTAEEEEKRRRALATRSILDREXXXXXXXXXXXXXXXXXXXXREKARLAEDKERREQEALELTRSVAVGAAGVEDGLRRIDDACGGNRSEKKAAVEALHQARDALPIDALTCLQILRNVATNPEDPRFRRIKRDNENFRRALGRFEGGIQILVSSGFRMQARTTKLAFTTVEEGQTVLVMYEPDLSEDMDGWSEWYKNITEAAERLKLELDERF 1189
            MTEFK+T+ +L  LE LL +L  D ST  P+KLATFST+K RLE EL++KV KF +RL+ETDPVSGA RYGESMT KV AL AKH+ LL++LP++EA I A VSQH+SR      E +K E E + +                             XXXXXXXXXXXXXXXXXXXX          + RE+EA EL  SVAVGAAGVEDGLRRIDDACGG  +EKKAAV+AL Q              ILRNVA+NPEDPRFRRIKRDNENF+RALGRFEGGIQIL+SSGFRMQ          VEEGQTVLVM EPDLSEDMDGW+EWYK+ITEA ERLK+ELDERF
Sbjct:    1 MTEFKRTAEDLASLEELLGSLGSDSSTPAPEKLATFSTAKGRLEDELSKKVSKFERRLNETDPVSGAPRYGESMTAKVVALGAKHQALLERLPQLEAEITAAVSQHESREAVSAEEARKREVERQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTREREAQELASSVAVGAAGVEDGLRRIDDACGGKPAEKKAAVQALQQ--------------ILRNVASNPEDPRFRRIKRDNENFQRALGRFEGGIQILLSSGFRMQ----------VEEGQTVLVMNEPDLSEDMDGWTEWYKHITEAVERLKMELDERF 324
[Close]
BLAST of mRNA_F-serratus_M_contig10.55.1 vs. uniprot
Match: A0A835YSV6_9STRA (PUB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSV6_9STRA)

HSP 1 Score: 160 bits (404), Expect = 9.520e-42
Identity = 135/360 (37.50%), Postives = 180/360 (50.00%), Query Frame = 2 
Query:  146 MTEFKKTSGELDVLENLLLTLLDDPSTSPPDKLATFSTSKARLEGELTQKVEKFRKRLSETDPVSGASRYGESMTTKVTALAAKHEDLLQQLPRVEAAIMAQVSQHDSRMVAVTSEGQKLEAEARLREEALSRIRTAEEEEKRR-------------RALATRSILDREXXXXXXXXXXXXXXXXXXXXREKARLAEDKERREQEALELTRSVAVGAAGVEDGLRRIDDACGGNRSEKKAAVEALHQARDALPIDALTCLQILRNVATNPEDPRFRRIKRDNENFRRALGRFEGGIQILVSSGFRMQARTTKLAFTTVEEGQTVLVMYEPDLSEDMDGWSEWYKNITEAAERLKLELDER 1186
            MTEFK+   E+D L   L  L  D S + PD        KA +EGEL  K+ KF KRL+ETDP+SG  RYGE M  KV  L  +++ L  +L   E  + A ++ H +                                                 + LA  + + R+     XXXXXXXXXX        ARLA     RE+EA  +  SV VGAAGVE GLR + DACGG     +     + +   AL       LQIL+N+ ++PEDPRFRRI+ +NE F   +GRFEG +Q+L+SSGF++           VEEG ++LVM EPDL+ DMDGW+ WY  + +  +RL  E + R
Sbjct:    1 MTEFKRVQAEVDELGARLAALEADCSDAAPDTAKVLQEIKATVEGELQGKMAKFEKRLTETDPISGQLRYGEGMRAKVAQLQQQYDALAAELRLAEGKLAAALAAHANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLAREAAVLRDKKKADXXXXXXXXXX--------ARLA-----REREAAAIMASVPVGAAGVEAGLRALRDACGGGGGSAQ-----MRKTCGAL-------LQILQNMRSSPEDPRFRRIRCENERFAADVGRFEGAVQVLLSSGFKV----------VVEEGASLLVMAEPDLATDMDGWTTWYDTLKDTIDRLNDETNAR 325
[Close]
BLAST of mRNA_F-serratus_M_contig10.55.1 vs. uniprot
Match: B7FS10_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FS10_PHATC)

HSP 1 Score: 85.1 bits (209), Expect = 1.710e-14
Identity = 97/335 (28.96%), Postives = 148/335 (44.18%), Query Frame = 2 
Query:  242 LATFSTSKARLEGELTQKVEKFRKRLSETDPVSGASRYGESMTTKVTALAAKHEDLLQQLPRVEAAIMAQVSQHDS--------RMVAVTSEGQKLEAEARLREE--ALSRIRTAE--------EEEKRRRALATRSILDREXXXXXXXXXXXXXXXXXXXXREKARLAEDKERREQEA-----LELTRSVAVGAAGVEDGLRRIDDACGGNRSEKKAAVEALHQARDALPIDALTCLQILRNVATNPEDPRFRRIKRDNENFRRALGRFEGGIQILVSSGFRMQARTTKLAFTTVEEGQTVLVMYEPDLSEDMDGWSEWYKNITEAAERLKLEL 1177
            L    T + R++  L   V KFRKR  E DPV+G  RYG     +V AL   +E+L   L RV       V  H +          +   +E +    +ARLR+E  A +R+   E        EEE++R A     I + E XXXXX                  R A + ERR Q+A      E T S+A G  GV   L ++  +   +   K  AV+ALH               +   +  +PE+  FRR++RD+  F   +G++EGG ++L+++GF +          T+++     +  EP++  DMDGWS W+  +    E +   L
Sbjct:   63 LECLETIRGRVQS-LESVVLKFRKRRGENDPVTGNPRYGSKTMDRVNALLGSYENLTAALLRVFDEESTDVLSHGNTGASTPIIHHIRTKAEQEHAVEKARLRQEREAKNRLEAEERELTRKRIEEEQQRAAAEQHRIAEEEVXXXXXI-----------------RXAREAERRAQQANARRDREWTDSIAKGTDGVRLYLDQLVHSTIHDPQAKTRAVKALHT--------------MFAQICAHPEEINFRRVRRDHPRFVTDIGQYEGGKELLIAAGFELG---------TIDD-VPCYISKEPNIENDMDGWSAWFDLLKATLEIVNERL 355
[Close]
BLAST of mRNA_F-serratus_M_contig10.55.1 vs. uniprot
Match: A0A6A3IUC9_9STRA (PUB domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IUC9_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.410e-14
Identity = 113/366 (30.87%), Postives = 171/366 (46.72%), Query Frame = 2 
Query:  146 MTEFKKTSGELDVLENLLLTLLDDPSTSPPDKLA------TFSTSKARLEGELTQKVEKFRKRLSETDPVSGASRYGESMTTKVTALAAKHEDLLQQLPRVEAAIMAQVS---QHDSRMVAVTSEGQKLEAEARLREEALSRIRT----------AEEEEKRRRALATRSILDREXXXXXXXXXXXXXXXXXXXXREKARLAEDKERREQEALE---LTRSVAVGAAGVEDGLRRIDDACGGNRSEKKAAVEALHQARDALPIDALTCLQILRNVATNPEDPRFRRIKRDNENFRRALGRFEGGIQILVSSGFRMQARTTKLAFTTVEEGQTVLVMYEPDLSEDMDGWSEWYKNITEAAERLKLEL 1177
            M+EF++ +  ++ LE  L  +      S PD  A       FS   + + GE+   +EKFR R S  DPV+   R+G  M  KV       +DLL++   V+ A+        Q ++++  +T+E      EA  ++E  +R             A E+E+ R  L  R      XXXXXXXXXX   XXXXXXX+     AE    R+ E  E   L  S+  G  G+E  +  +             A EAL   R +L       L ++ N+ ++PE+  FR I +DN +F   LG++ GG Q L++ GF+      +L        + V V+ EPDLSED+D WS W+  + E    ++ +L
Sbjct:   13 MSEFRQATAHVEALEARLALV----QQSVPDNTAHVILEENFSFILSAIGGEMDDMMEKFRARCSMVDPVTNQPRFGPKMLAKV-------QDLLRRYDEVKVAMEEDAPLGLQVEAKINQLTAE------EAAKKQEQAARXXXXXXXXXXXXLAREQEQERLLLEAREXXXXXXXXXXXXXXXLAAXXXXXXXQRGKERAEXXXXRQLEGEERERLNASIPHGKEGLEKAIAML---------RNSTASEALF--RQSLQ----KLLAVVSNICSSPENAAFRHIPKDNAHFHADLGQYAGGPQCLLALGFK------ELQQGDEAHPRAVFVLEEPDLSEDLDAWSNWFDELKEMQSLVESKL 340
[Close]
BLAST of mRNA_F-serratus_M_contig10.55.1 vs. uniprot
Match: A0A6U3X4B2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3X4B2_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.280e-13
Identity = 54/170 (31.76%), Postives = 81/170 (47.65%), Query Frame = 2 
Query:  695 EDKERREQEALELTR----SVAVGAAGVEDGLRRIDDAC-----GGNRSEKKAAVEALHQARDALPIDALTCLQILRNVATNPEDPRFRRIKRDNENFRRALGRFEGGIQILVSSGFRMQARTTKLAFTTVEEGQTVLVMYEPDLSEDMDGWSEWYKNITEAAERLKLEL 1177
            E++ R E+EA E  R    SV  G  GV   +  I +AC     G    E   A+ ALH               I   + + PE+P+FRRI+RD+  F   +GR  GG +I ++SGFR+             EG +     EP++  DMDGWS+W+  + E  + ++ E+
Sbjct:   72 ENERRAEEEAREADRAFVASVPRGGDGVRAQIGLIREACRSNTDGSGEKEWNTAIGALHT--------------IFTQIMSRPEEPKFRRIRRDHPKFLEDVGRHPGGKEIFIASGFRLDNI----------EGVSCFFSKEPNIEHDMDGWSDWFNELKETLQIIEEEM 217
[Close]
BLAST of mRNA_F-serratus_M_contig10.55.1 vs. uniprot
Match: G4ZJA0_PHYSP (PUB domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJA0_PHYSP)

HSP 1 Score: 77.0 bits (188), Expect = 2.590e-12
Identity = 96/304 (31.58%), Postives = 143/304 (47.04%), Query Frame = 2 
Query:  296 VEKFRKRLSETDPVSGASRYGESMTTKVTALAAKHEDLLQQLPRVEAAIMAQVSQHDSRMVAVTSEGQKLEAEARLR-EEALSRIRTAEEEEKRRRALATRSI--------LDREXXXXXXXXXXXXXXXXXXXXREKARLAEDKERREQEALELTRSVAVGAAGVEDGLRRIDDACGGNRSEKKAAVEALHQARDALPIDALTCLQILRNVATNPEDPRFRRIKRDNENFRRALGRFEGGIQILVSSGFRMQARTTKLAFTTVEEGQTVLVMYEPDLSEDMDGWSEWYKNITEAAERLKLELD 1180
            +EKFR R S  DPV+   R+G +M  KV       +DLL++   V+ A                     +E EA LR +EA      A E+E+ R     R          L R        XXXXXXXXXXXXX E  R  E++ER +     L  S+  G  G+E  +  + D+ G          EAL+  R +L       L ++ N+ ++PE+  FR I ++N +F   LG++ GG Q L++ GF+      +L      + + V V+ EPDLSED+D WS W+  + E    ++ +L+
Sbjct:    2 IEKFRARCSMVDPVTNQPRFGPNMLAKV-------QDLLRRYDEVKLA---------------------MEEEAPLRLQEAQRAAELAREQEQERHLQGARXXXXXQQREELQRIEALAAAAXXXXXXXXXXXXXEELLRQLEEEEREK-----LNASIPHGKEGLERAIAMLKDSTGS---------EALY--RQSLQ----KLLAVVSNICSSPENTAFRHIPKENAHFHADLGQYAGGHQCLLALGFK------ELQQGDEAQLRAVFVLEEPDLSEDLDAWSNWFDELKEMQSFVEYKLN 251
[Close]
BLAST of mRNA_F-serratus_M_contig10.55.1 vs. uniprot
Match: A0A7S1YSV5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YSV5_TRICV)

HSP 1 Score: 77.8 bits (190), Expect = 6.300e-12
Identity = 97/323 (30.03%), Postives = 150/323 (46.44%), Query Frame = 2 
Query:  290 QKVEKFRKRLSETDPVSGASRYGESMTTKVTALAAKHE---------------------------DLLQQLPRVEAAIMAQVSQHDSRMVAVTSEGQKLEAEARLREEALSRIRTAEEEEKRRRALATRSILDREXXXXXXXXXXXXXXXXXXXXREKARLAEDKERREQEALELTRSVAVGAAGVEDGLRRIDDACGGNRSEKKAAVEALHQARDALPIDALTCLQILRNVATNPEDPRFRRIKRDNENFRRALGRFEGGIQILVSSGFRMQARTTKLAFTTVEEGQTVLVMYEPDLSEDMDGWSEWYKNITEAAERLKLEL 1177
            QK  +FRKRL+E DP++ A RYG     +V A+  K++                           D++++L + E AI  Q  Q         +E  K++ E+R   EAL+     +E +KR             XXXXXXXXXXXXXXXXXXXX        D+            S+  GA GV + L  + D    + S  + A+++LH               I   +A +PE+ ++RRI+RD+  F   +GR  GG ++L+++GF+++            +G +     EPD+  DMDGWS W+  I +  E ++ E+
Sbjct:  119 QKAGRFRKRLAERDPITDAPRYGGKTMGRVVAMLEKYDALRVGIGMAFGGNQPGEGHQMDGEVLADVMRKLAKQEKAIKDQEKQE--------AETGKVDVESRREAEALA----LKELQKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRA--------FVASIKKGADGVREQLAAMRDGTSSDPSGHRKALDSLHM--------------IFNQIAAHPEEMKYRRIRRDHPKFMEDIGRHPGGKELLIAAGFKLETL----------DGVSCFFSKEPDIENDMDGWSAWFDAIKQTLEIIEEEM 397
[Close]
BLAST of mRNA_F-serratus_M_contig10.55.1 vs. uniprot
Match: A0A7S1BVG3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVG3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.150e-9
Identity = 45/150 (30.00%), Postives = 76/150 (50.67%), Query Frame = 2 
Query:  731 LTRSVAVGAAGVEDGLRRID-DACGGNRSEKKAAVEALHQARDALPIDALTCLQILRNVATNPEDPRFRRIKRDNENFRRALGRFEGGIQILVSSGFRMQARTTKLAFTTVEEGQTVLVMYEPDLSEDMDGWSEWYKNITEAAERLKLEL 1177
            L  SV +G  G++  L  +  +  G    +   A+ +  + R+AL     +  +++  +  +PE+ ++RRI+  +E F   +GRFEGGI+ L+++GF          F T+ EG   LV  EP+L   +D WS WY  +  A   L  E+
Sbjct:  130 LQSSVRLGVEGMKHSLEILKKNTVGLEGQDDIQAMVSAEEYRNAL----CSLHKLVEQMVKHPEEEKYRRIRSYHEGFLMDIGRFEGGIEFLIATGF----------FFTMVEGIKSLVCREPNLETQLDAWSAWYDRLKLAITILDEEI 265
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FV16_ECTSI5.960e-10361.49PUB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YSV6_9STRA9.520e-4237.50PUB domain-containing protein n=1 Tax=Tribonema mi... [more]
B7FS10_PHATC1.710e-1428.96Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6A3IUC9_9STRA6.410e-1430.87PUB domain-containing protein n=5 Tax=Phytophthora... [more]
A0A6U3X4B2_9STRA1.280e-1331.76Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
G4ZJA0_PHYSP2.590e-1231.58PUB domain-containing protein n=1 Tax=Phytophthora... [more]
A0A7S1YSV5_TRICV6.300e-1230.03Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1BVG3_9STRA6.150e-930.00Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:200235..216131 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.4
Seed ortholog evalue2.6e-85
Seed eggNOG ortholog2880.D7FV16
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PUB domain
EggNOG OGs2BVEC@1,2S26D@2759
Ec32 ortholog descriptionPUB domain
Ec32 orthologEc-14_003810.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1300
Cds size1047
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.55.1prot_F-serratus_M_contig10.55.1Fucus serratus malepolypeptideF-serratus_M_contig10 200343..215986 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928781.8067627-UTR-F-serratus_M_contig10:200234..2003421622928781.8067627-UTR-F-serratus_M_contig10:200234..200342Fucus serratus maleUTRF-serratus_M_contig10 200235..200342 -
1690962568.0711997-UTR-F-serratus_M_contig10:200234..2003421690962568.0711997-UTR-F-serratus_M_contig10:200234..200342Fucus serratus maleUTRF-serratus_M_contig10 200235..200342 -
1622928781.9216535-UTR-F-serratus_M_contig10:215986..2161311622928781.9216535-UTR-F-serratus_M_contig10:215986..216131Fucus serratus maleUTRF-serratus_M_contig10 215987..216131 -
1690962568.1788614-UTR-F-serratus_M_contig10:215986..2161311690962568.1788614-UTR-F-serratus_M_contig10:215986..216131Fucus serratus maleUTRF-serratus_M_contig10 215987..216131 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928781.8167593-CDS-F-serratus_M_contig10:200342..2004771622928781.8167593-CDS-F-serratus_M_contig10:200342..200477Fucus serratus maleCDSF-serratus_M_contig10 200343..200477 -
1690962568.0834346-CDS-F-serratus_M_contig10:200342..2004771690962568.0834346-CDS-F-serratus_M_contig10:200342..200477Fucus serratus maleCDSF-serratus_M_contig10 200343..200477 -
1622928781.8321476-CDS-F-serratus_M_contig10:201274..2014761622928781.8321476-CDS-F-serratus_M_contig10:201274..201476Fucus serratus maleCDSF-serratus_M_contig10 201275..201476 -
1690962568.0922103-CDS-F-serratus_M_contig10:201274..2014761690962568.0922103-CDS-F-serratus_M_contig10:201274..201476Fucus serratus maleCDSF-serratus_M_contig10 201275..201476 -
1622928781.8448057-CDS-F-serratus_M_contig10:201607..2017541622928781.8448057-CDS-F-serratus_M_contig10:201607..201754Fucus serratus maleCDSF-serratus_M_contig10 201608..201754 -
1690962568.1048627-CDS-F-serratus_M_contig10:201607..2017541690962568.1048627-CDS-F-serratus_M_contig10:201607..201754Fucus serratus maleCDSF-serratus_M_contig10 201608..201754 -
1622928781.8613145-CDS-F-serratus_M_contig10:201952..2020771622928781.8613145-CDS-F-serratus_M_contig10:201952..202077Fucus serratus maleCDSF-serratus_M_contig10 201953..202077 -
1690962568.1220953-CDS-F-serratus_M_contig10:201952..2020771690962568.1220953-CDS-F-serratus_M_contig10:201952..202077Fucus serratus maleCDSF-serratus_M_contig10 201953..202077 -
1622928781.8705313-CDS-F-serratus_M_contig10:202229..2023101622928781.8705313-CDS-F-serratus_M_contig10:202229..202310Fucus serratus maleCDSF-serratus_M_contig10 202230..202310 -
1690962568.1355639-CDS-F-serratus_M_contig10:202229..2023101690962568.1355639-CDS-F-serratus_M_contig10:202229..202310Fucus serratus maleCDSF-serratus_M_contig10 202230..202310 -
1622928781.8815143-CDS-F-serratus_M_contig10:202650..2027761622928781.8815143-CDS-F-serratus_M_contig10:202650..202776Fucus serratus maleCDSF-serratus_M_contig10 202651..202776 -
1690962568.1444616-CDS-F-serratus_M_contig10:202650..2027761690962568.1444616-CDS-F-serratus_M_contig10:202650..202776Fucus serratus maleCDSF-serratus_M_contig10 202651..202776 -
1622928781.893832-CDS-F-serratus_M_contig10:203221..2033321622928781.893832-CDS-F-serratus_M_contig10:203221..203332Fucus serratus maleCDSF-serratus_M_contig10 203222..203332 -
1690962568.151742-CDS-F-serratus_M_contig10:203221..2033321690962568.151742-CDS-F-serratus_M_contig10:203221..203332Fucus serratus maleCDSF-serratus_M_contig10 203222..203332 -
1622928781.911332-CDS-F-serratus_M_contig10:215866..2159861622928781.911332-CDS-F-serratus_M_contig10:215866..215986Fucus serratus maleCDSF-serratus_M_contig10 215867..215986 -
1690962568.1608694-CDS-F-serratus_M_contig10:215866..2159861690962568.1608694-CDS-F-serratus_M_contig10:215866..215986Fucus serratus maleCDSF-serratus_M_contig10 215867..215986 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig10.55.1

>prot_F-serratus_M_contig10.55.1 ID=prot_F-serratus_M_contig10.55.1|Name=mRNA_F-serratus_M_contig10.55.1|organism=Fucus serratus male|type=polypeptide|length=349bp
MTEFKKTSGELDVLENLLLTLLDDPSTSPPDKLATFSTSKARLEGELTQK
VEKFRKRLSETDPVSGASRYGESMTTKVTALAAKHEDLLQQLPRVEAAIM
AQVSQHDSRMVAVTSEGQKLEAEARLREEALSRIRTAEEEEKRRRALATR
SILDRERERLAAEALRSREERQLAAEREKARLAEDKERREQEALELTRSV
AVGAAGVEDGLRRIDDACGGNRSEKKAAVEALHQARDALPIDALTCLQIL
RNVATNPEDPRFRRIKRDNENFRRALGRFEGGIQILVSSGFRMQARTTKL
AFTTVEEGQTVLVMYEPDLSEDMDGWSEWYKNITEAAERLKLELDERF*
back to top

mRNA from alignment at F-serratus_M_contig10:200235..216131-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig10.55.1 ID=mRNA_F-serratus_M_contig10.55.1|Name=mRNA_F-serratus_M_contig10.55.1|organism=Fucus serratus male|type=mRNA|length=15897bp|location=Sequence derived from alignment at F-serratus_M_contig10:200235..216131- (Fucus serratus male)
CGTACCATTGCTATCGCTGCACTCCCGTATTCCCTTGCTCCTTGGATGAC
GAACGGTTCCTTTGCCTACAGTAGATGTTATTTCGATTAAAATTCTCAGT
CAATTCTGCTTCTATTACGTGATTCAGCGCACCCTCATCTTCCCGATGAC
GGAGTTCAAGAAAACATCCGGAGAGCTGGATGTACTCGAGAACCTTCTTT
TGACTCTACTCGACGATCCTTCCACCTCACCGCCAGATAAATTGGCGACG
TTCTCGACGTCAAAGGTAAAGTCTAGCCTATAGAGATAGCATACGATGGA
TGTTGTTTGAATACAGAATACGTGCGGGGCTGGTGCTGTACACTCGTCCA
ATTACCTATTTTGCAACAACATGGACGTTGTTGTCTGGAAACAGAAAATG
TTTGACCTGTACGATATTTGGTTTTATTGTGTGTTCGAAGAATAGATAGT
GGCATAGGTGGAAGAACATGTATGTCGTAGTTTATATGCTGAACTGTAGA
CACTAACGGCAAAACCCCCCTAAAATCTGAACTCATCCGAGCCTTTCTGA
ATCATTATCCACTGCTGTCAAAACGTTTGGGAGAGTGATAGGAGATTGTA
CCCGCTCCTTGTTGTTGTTTTGATGTCCCTACATGGTTTAAAGAAAAACC
AGAACGCGCCTATACCTTCTGAGCATCCTCCAGTAATGTCGTGTACAGTG
TAACGGTCGGCTTCCAACATGTCCACTTCATACCAATAATTGGTGTGGGA
AAGAGAGGCGCATATTATTTGGTCCATGGTGACCTGCCAAGGCAGCACCC
GTTTGGAACTACCTTGAAGTTTACTGGCCCTGTGCCGCTGGACTCTCGGC
AGTGAACATCATCGTTACTCAACTGCGTGACCCAATAAACTCGAGATTGA
CTCGATGGCATATCTCGCTTTAAATAAATAATTGGACGCCTCCGCGGAAC
TCGGGAGGAATCCCGTAAGTAAGCACCATATTTAGCCTGAGTATGGAGAT
GAGCAGGCTGACGTGGGACGGGACTGACGAACCCGTCTCGCGAGACCAAA
TTCTCAGGCGCGAACGGGGACAGGGGAACATTCATTTCTCCTGTTCAGCT
GACCACCAGCAGGATTGGCAACCTTACCCGGTTGATCAATACTCTTGCTA
TATGTGTGACCATACCAGTGATGCCGGGTTGCAATAATTTGTAGGCTGTT
ATGCTTTTACTGGAAACTGAAGGAGATTATTATTTCATCCTCGAGGCACC
CCAGGACGTGGAGCAAGACGCAGCTTGTGGTTCACAGCGTGAACAACACG
GACCACCGCGGACCGGGAACAGCATAGGTTCCCTGGGGAGGTTAATATTG
TGGGGAATATGGCATTAAATCAAAATACTAAGCTGCGGAAAGCGTCGTGT
TGACGCCGCCGCCATGACAACTTCGGAGGTTGATACCTCAGAATCAACCC
CGAACCAGATGGGTCCATCTGTAGAACCACTGGATAGTCACGAACACCTC
TAGTATCGACGATAGCAACACTGGAGATAGTATGCTGTAGAGTGTTCTGA
GCGTAGGTCGAATCGTCCGCGCAATGTACGTAAAAAACGAAAGAGACTCG
ATGATCGAAGGTGTGGGTACGAAATAAGGGCGTACTGGGACTTGTTTTTG
TAACTTGAATTGAAGTTGATGGCTGTACTGGTATAAGTACTGAATATATA
GTACACACTCTGTTTGAGGTAAAAGTATTTGAAAATCAGCGAATGCTGTA
ATTAGTACATGGAAAGTATATTTTTTTTCGTATCTCGCTCACGGCCGATG
ATAAAGGGCCCCAACGTGCTATGAATAGGTTACCAGGCCCATGTACAGTA
CAGCACCGTGGTCACGAAGGGTCTTCCTATGTCACGCTTTCTGCTACGGA
GGCCAGAATAAAATACGTGAGTTTGTCAAGAAATGACTCTCGACTCCGCA
CTAAATAGTTGTGAGGAGGTTACTATGAATACAATCATAGTTCAATTCGG
GCAAAACAAGCGGATCGTTCGTATGTAGTAATGGCATGATGTCAACTCTA
TTTTCAAGTAGCTTACAGCAACACATGGAGGGTAGGTAGCAATGTGATGA
TGTCAAATACTCTTCAACAAGGCAGGTATAGACCTAAAAAATTTGGGATA
CACACGCACCCATTCATGGTAAAGACATCTATTAATACTGTATTAATACT
GAAGATTTGTATTGAATCTGTTCAAGAACGAGAGGGACTCGGTCGCTGAA
GTCAGGGTATCTGCACTGCTTTAACCCATGGTGACTCGGGTGTCCCCTAA
TCCCGCCGCACTTTTCGTACGGCTTTCTTTGGCCGTGGATACTTTTGTTG
ATATCGTCGGACAGAATTGGCCTAGAAACGCAGAACTTCGCACACCTCTG
CAACAAACTGTGATACAGCGGGGCCTACCTCTGAGGTGGCCATAGCTATC
CCAGATAGCGTGGTTCAGCGAAAAAAACTACATTTATCTCACGATAAAGA
GGCGTTTTCCGGCAACACTGCATACATGATGTTTTCTACAATTGTTTACA
GCTGCAACCTGTTCTTTTTCCTGTTGTACCAGACAGTACTAAGGCCGAAT
GTTTTGCATGCATAAAAAGCTAAACGAAAACTTTTTATTTACCTATTTCG
TTGACGTTTTGTTCACCACCAAAACCCCAAAAGGGCAATCTTACGCAAAC
GTTTTTTTTTTTACACGAAAAATGAAATGACATTCAAACAATGACGGAGG
CATTCCTTCTATGGGCGGTTCCGTTTTTTTTAAATGCTGTGTGATAGCCT
CGCGCTGTATCGCGCTGCGCCCGTAGCGATGCCACCGTTGGTGATGAAGG
ACCGCAATGAAACCGATGGCCGACGACCAGAAAGAAAGAGATCGAAACTC
TTGTTCTTAGCAATAATTCCTTTTCCAGCATCCAGCTATGTATCACTTTA
TTTGAGGACTATTGGCCCTGTGCCGGCGGACTCCCGGCGATGAACGCCAT
TGGTACCTGGTACGCAACTGCGTGATCCGATAAACTCGGGACTGGCCCGA
TGGCGGTTGACGGTATATATGAGTTAGGGGGGTCTTTCCTTTCCGCAGGT
GTTTTGCCGGACTCATCCTCGAGAGTTGGCACCAACTGGCCGCCCACCCG
ACCCAGCCGGTTTGTTGGCAAGCGGTGGCAGCTTGGTTGTGTCTGGACGG
TTCCACCAGGTGCGCCCCTCCCGAACGCCAATGTGGTGTCCTTCGGAAGC
GTGTGGCAGGCGAGGGGCAGGTGATACTGTTGTCAAAATCCTGATAAGGT
GCTGCATCACGCGCAAGATGTGTCAAAAGAAAAATATGAACCCAAAATCC
TGATAGGGTGCTGCATCACGCGCAAGATGTGTCAAAAGAAAAATCTGAAC
CCATCTAGACCTTTTGAGCACCCCACACAGGGGGAAAACTGTCAAAGCTC
TTGGATGAGATCATAGGCTGCAAATACAAAACCTCTTGATGGCATTTAAA
CGGTTTCCTCGATGGTAGTAACATTGGGTCAGCAGTACGATGTCGGGGAG
AAGCCCACCGTTATACTGTACACTTACATCAATCGCCACGGAGGGACACC
GAAAAAGACTTTTAACAAACAAAAACATTGTAAATAGTACATACCACAAC
CAAAACCGACCAAAAACAATGTACTTGTAGTACTTAATTAGATGGGATAG
TTATAATATACGATAATAATGCCATCGCACCATACAGCAATAGGGGTTGA
TAGTCTCACGCCGGTCGCCTCGGTAGCTCAGTAGGTACCTCGTAACCTTC
TGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCACT
AAAAACTAAAAACCAAAATAAAAATGCCCAACGGGTGGAGAACGATTAAT
TCGTTAGTACACAAAATTCGACTTCACGGTCGACGAGGGAAAATAATGGC
TGAATCCTTCTCGCGATAAAAAGTAAGGCACGCACCGCAGAAGGAAGGGG
GATGCGAAATCCTGTGTGACCTTCTTCCTGTGTGACCCCGGCTGGTACGT
CCAACAAACTTGATGTCCAGAATGGATGGAAAGAAAACACACACTCACAC
AGTCTAATAATAGAACACAAGGAACGTTATGATATTATAACTGATGAGGG
GTGGTGCATTTTGGTTAAGGTATGGGACATCTAGTGGTAGTGGTAAATAC
ATAGGGTTTGGGTTAAGGATTGAAACAGCATAGTAATAGGGCAGAGAGGA
CCACCATCGTAGATATCTTCGACGCTGCACGTTCTGTTAGGTGAGTAAGC
ACCATATTCAGTGAATATGGTGGGAAGCTCGATCGTCGACAAGCCAAGGG
AGGGCTGAACCCATGTGCGTGAGAATCAAAGGCGAGATCGATAAGGCTTC
TTCTTACGAGAGCCAGTCTGGAGCGGCGAACGGGCAAGATTCTAGGGTGC
TTCCAAGGAAAGTCGGCTTTGACTGGCGGATGCTGGCTCGAGTGTCGGCT
TCACAGCTCATCAAGGCCTCCATCACCGTGGACCTCGGTACAGCAGCTTT
ATGCTTTTATGCATGACGTGGTATTTGAGAAACGCGGGGTCGGTTGATTG
AACTGACTAGAGCGTGTCTCTTCCGCTTTGTTATTGATAGCGCTGGACAT
GGGTAGGCAACAGCAACAGCAGCCCTAGTTGATCGGGGTTATGGTCGGTA
TGGAAAAGGGATATTTGTATGTTTTTGATTTGCCACCGTTCGGTGTCTTT
TTTTTTAGAGTGTCGCATAATTTTTCCGCGTGTAGCTTAGCGATAGTACT
GAAACTTCCTCTTTTACTGTTGTGTGGTTCCTTTTTTGTTTGACGAGCTG
GGTGCCACCATGACTTAACCCCTTGACCTCCGTCCATCATTGAGACCGCA
AACGAGATTGGCATCTGGTAAGATCTATTAGGGCTGACTATTTATCTCGC
TGAAAGTGCGAATCTTAAATCAAAACCAATCAAATGAATGGACGCCGTCA
CGGAAAGCGGGAGGAATCCTCTTAGTAAGCACCAGATCCAGTCTGAGTGT
GGAAAACGAGCGGGCTGGTGCGGGGCAGAACGGCCGAGCCCGTCTCGCGA
GGCCAAATTCTTAGGTGCAAACGGGGACAGGGAAACATACACTTTCTCTG
TTCAGTTGACCATGAGCAGGATTGGCGTAGCAACCTTACCCGGTTGATCC
GTACTCTGATGAAAGGGCCAACATACATACATACATACATACATACATAC
ATACATACATACATACATACCTCACCTCTCCGAGAGGGTAAGCCGGAATC
CCGCAACAGAAGACAACCGCTGTAGTTGCAGTAGTATCCTCCCGGGTGGC
CTGTAGCCGCCTTGCCTTTCTCTGATGTACGAACTTACGGGTCGGATGGG
TGGCCGTGTTGGGGCTTTATGGGCTACTGGTACAGATTTTTGGACAGCAG
GGTTTGGTGGGTTGGACCGAGCCCCGCCTGCTCGGGACAGCAACGAACCA
GCAAGCATGGCGGAGCGAGAGGGCAGAGCTAGAAGCGAGACTGCTAGTGA
CGGAACTGCTAGTGGCGGAAAGGTGCGGCTCGGCGACAAGCCACCTCGAC
AGCGGGGTCCCCAACATCGAAGACTCGGGTACGATTCCCGCCGGTTTTTT
TTGTTTGGTTCTGATTCGCGATCGATTGGACCAGGGGAGTTTTAGCTCAC
GGTGTTGTACGTTCCGGCATACACACACGAGCACAGACCCTATTCGGCTA
CTTCGTATCCGACTAGCTTTACTCTTGGCTCTCTCCTTGCCCTCATGATT
CGCGTCCAGCGCAAAACTCATGGTTGGTGTTGGCTCGCGGGGGCTTTTTC
GCGTGACTGTACATTTTGGGACTGTAGGGAAGAAATACTTATTAGTAGTA
GACAACAGATGGGCCCACAGAGGAACTCATCAGCCTTAACGACAGCAACG
GGCGCAAAATACGTGGACCTGGGGAGATTTAGCTCAATAACGAGCACAGA
CCCTATTTGGTTACTCTGTATCCGACTAGCTTTAGCGCTGACTCTCTCCT
TGCCCTCAGGATTTGTGCCTAGCGCAAGACTTATGATTTGCGCTTCACCC
CGGGCCCTATGGATTTTGGATTTTTTTTTCGTGTGACTGTATGCTTTGGG
ACGGGAGGGGAGGAGGACTTACTAGGCAACCGATGGGCCCACAGGTGGAC
ACAGCAACCATTAGAACAGCATTGAGCACAAATTGCGCGGACTCGAGAAG
TCTTAGCTCTATACGTTGGACTTTTCGGCGTACAAATACGAGCGCAGGCC
CTATTCGGTTACTCCGTATCCGACTAGCTTTACCCCCGACTCTCTTTTTG
CCCTCAAGATTTTTGCCCAGCGCAAGGGTTATGATTTGTGCTTCACCCCG
GGCCCTATGGCATGCGGGGGATTTTTCGTATGGCTGTATGTTTTGGGACG
GGAGGGGAGGAGGACTTACTAAGCAACCGGTGTGCCCACAGGTGGACACA
GCAACCATTAGAACAGTATTGAGCACAAATCGCGTGGGCTCGAGAAGTCT
TAGTTCTGTATGTTGGGCGTTCCGGCGTACACATACGAGCGTAGACCCTA
TTCGGTTACTCTGTATCCGACTAGCTTTACCCCTGACTCTCTCCTTGCCC
TCAGGGTTTGTGCCCAGCGCAAAACTTATGGTTATGCTTCACCCCGGGCC
CTATGGCATGCGGGCGATTTTTGGTGTGACTGTATGTTTTGGGACGGGAG
GGGAGGAAGACTTACTAGGCAACCGATGGGCTCACAGGTGGACACAGCAA
CCATTAGAATAGCATTGAGCACAAATTGCGTGGACTCGAGAAGTATTAGC
TCTATATGTTGGGCGTTCCGGCGTACACATACGAGCGCAGATCCTATTCA
GTTGCTCTGTATCCAACTAGCTTTACCCCTGACTCTCTCCTTGCCCTCAG
GATTTGTGCCCAGCGCAAGACTTATAGTTTGTGCTTCACCCCGGGCCCTA
TGTCACGCGGGGGATTTTTCGTGTGACTGTATGTTTTGGGACGGGAGGGG
AGTAGGACTTACTAGGCAGCCGGTGGGCCCACAGGTGGACACAGCAACCA
TTAGAACATCATTGAGCACAAATCGCGTGGACTCGAGAAGTCTTAGCTCT
ATATGTTGGGCGTTCCGGCGTACACATACGAGCGCAGACCCTATTCGGTT
ACTCTGTATCCGACTAGCTTTACCCCTGACTCTCTCCTTGCCCTCAGGAT
TTGTGCCCAGCGCAAAACTTATGGTTTGTGCTTCACCCCGGGCCCTATGG
CGTGCGGGGGATTTTTCGTGTGACTGTATGTTCTGGAACGGGAGGGGAGG
ACTTACTAGCTACCCGGTTGGACTAGTTTTACCCGTGTGTTGGGGGGGGA
CAAGCATGTCCACCATTTTCCGCGTTATTGGCCCCATGTGTTTCTCCAGG
CAGAGCGTTGTGGTTGATGTCGAGGGAGTGGAGTCCCGGCCGAGAGCCGT
CGCAGGGGGGAGAGGAGTTGTAGCTGTACGTACGCGCATTTCTAGCCAAA
AATACGTTGACGAGAAGTAACCCCCTGGTGGTTTACATGCAATAGTATAT
AATGAGTAGACTACAGGGCTGGATTGCGCGGTGATATGCAATTTAATAAA
TATACATACATATATACATACATACATACATACATACATACATACATACA
TACATACATACATACATACATACATACATGCATACATACATTGTTCATGT
TGTCTCTTGTTGCGTTCCATGTCCAATATCGTCATTATCTACTGTACAGG
TGTCGTTTGTCAACTGTGTCCCTTCTGTAAATAGCCCCCTCTGCCATCCA
TCCGCATATTATCAGCTCTCCAACGAAGTGCACGCCACACGCCCGCCGGT
CCCTCGGTTGATCGATCGGTGGACACCGAGAAAGTTAAAAAATCGTTCAA
ACGTGTACACACGTACCCTGCGTACACTCCCCCCCCCCCATTTATTTCAT
TGCTCCGACAAAGTCAAGAGTCAAAGTCAAGAGTGCACGGCTAGACTACA
GCATGTCAGTGATAGCTCCCACCGCAGACATTCTGATCCCTGGTCGGGAA
CCGAATCCTCCTTCACCGAGGTCACCAGGTGCACAAAAAGCACGCACGGA
ATGCGGAAGCACCAACGAAAGATTTCCGCCGTTTTCAACGCGTGATTCTG
CGACCCTGCTTGCTGAAGCATGGGCCACCACGGTGCCTGCCGCGTCCGCT
TTCCCCTCGGCGTGTCGTCACCGCATCCTTCACTCCACGTATAGCCATAG
CTGTAGCTCTCATCTTCTTCCTCGAGAAATCTCATCAGGCACCACTTGCC
GCGCAGCCATCGTAACCCGGGCCACCCAGCTCAGATAAGCTCCTCTCTTT
CTCTTGGCCAATATTTTTTTGGTATAAAAAAAATCGTGTGCAAAGTCCAC
ACGTTTCAAGAAAATATGGAGTAATGAATAAAACCCGTGTGAGTGTCGTC
CCCAAAACAAATTCGAGTTTTTTTTTCCCCCATGTGTTCCCAAACGAAAA
CAAACAAAAATACGAACTTGTATGCGTAAGATTCGACAAACGAAAAAAAC
AAAAACAAATAACGCGAAGGGGAAAAACATTTTTTCGTCGAGATATTTCC
GTTTGCATAAGATCCGACCTCATGCACTATTGCTAAGCTGTACGTATTAT
TTAATAGTATTGGACTGTCAGGAGTAACGGTACCAGTAGAGCACTGGAGC
TAGATCGGCGGCGGGGCATAAATGGAGCGCCTCCTCCTAGTAGAGTAAAC
AAGTCGATGGACCATCCCGATTCTGTCGCGGATCACGACCAAAAACACCC
AAAGCGGCTTGTGGCTGTCCTTGTGATCTTGTGTTTGTTGTTCAGATTTA
GAACTCTCCTGACCCTTTTTATCCTCTGTCCCAATCAATGTTTTGTAGTC
CAGCCTGGTGGTTGGTTGGTGATGGAAAGCGGGGTTGAGCCGAACAGCCC
ATCTGGATCGCTTTTCTTGACGCAGCGGACGTTCGTTCTACCTCTTGTCC
GAGACTAGTTGTTACACTGTTACACTATTACACTGCTTGTCACATGATTA
CACGGACAAGCTGCAGATTTGAGAAAGAGAAGAGTGGGGTCTGCTATCCA
CTTGTATTGTAAATAGTTAATAAGTACCTGGTAGTTGGTAGCTGTACCTC
TGTTAAGGTTCGTACAAGGGGTTGGCGTTGGTTTCACTTTACCACCTGCT
CTTCCAAATCAGTTTCCATTTTGTCCTTCATTTCTCAAGGTGGAAGGTAG
GATACGGGGGCCTTGGAGTTCCAGAATATGCGGATTATTGTCCCGGGCTT
GTTCTTGCTCAACCTGGTAGAAGTACCGAAATTACGGTAATGATGTAATG
ATGAAATATACTGGTATGGGCGTTATCGGGACGCCAGAGCCAACCGGTCG
GTTCCTTCCACAATCCATGATGATTGGTTGATTGATTTATTGATGGGTTG
ATTGATTCCACACATTCAGCGTATTGTCCTTGCAACTGAAGAAACTACGG
TGACACAACGAGTCAGCCATAGACCTATCAAGTGCCAATCTCGCTCGTGG
TCGCAAAGAGGTACGAAGGTCAACGGGTCACATCATGTTGGCAACCCGCT
ACTCAGACCAGCAGGGATCCAAATCGCGACAAAATCCTTGCCAAGGTTCA
ACCAACCGAGAACATCGGAAACTTATCGGCGTCAAGACGATGTCTTTGGG
TTCGAACTACAGTGTCTACTGTCTGGAGTGTTGTCAGTATTTCCGAATCT
GAATTACAAGCTACAGAGAAGACTGCCTGATGTCTAATGTGCTGCCCATA
CAACCAAAGACATCAAAAAGGATACAATTAGTTTTTCTAAGCTCTCGGAG
GGTCACACGAAGACAAGTTATGTGACACTTTACGAGCGATGGCCCCGACC
AATATAAGAACGGTTCATCAAACCTCTTTACACCGTATCGAGAGCAACCC
CAATCGACTCGGATTGCTGTCGCTTACCCACGGCCAGCGTTCTCAGCAAC
AAAACGGAAAAATCACGTCCCAATCAGTTTTGATCAACAAGCCCAAGTTT
TTCAGGGCCACACGTCATGCAGAAATAAGTAAAACTGAAATACCGGGGTG
CATGATGGTGGATGCCTTGAGCTGGTGAAGCCGGCGCGCGATCCTGCATC
CAGCCGCCCAAAACCCTGTGCATCCCTGAAAAACGCACCACGAATCTTGC
CCGTTTGCCACTCCTTGTTGGTGCTCGTCGGAAGAACACAGAATGTGGCC
AGAGATCAGCTTTCTCCTCAAAAACCTCCCGGTTCGCGCTTTTGCTTCTC
GCGCACAGGGTTCAGCACTCCCCTGGCTCGTCGACAATCGAGCTGCCCGC
CGCCCTCGCCGAATCTGGTGCGTATCCACCCTATAGAGCGCTATCAGGCT
CTCCGTGACAATTCCGCCTTTCCTCTCGCGTGCCACCACCTCCCGAAGGG
CACCAAATTGGAGCTCGGAAGAGGCGCGCACCTGAGGAACACCATCCTCC
ACCAATCATACCGCCGCCGCGTCTCAACGGACCGGATGAATCGCGAACAC
AGCCACTCGGCTGGATCTCTCGAGGGTGAGCCCGGCCCTACACCCGCCGG
AAAGACCCTTCCAAACTCATACCCCAAAACCAGGTTAAGATGATACTGGT
GATGATATCATGTCGGAGGGAGAGGGGGCACGAGGTATATGAGTGCTCGT
ATAGCTCTACTTTACAACAGTATCTAATCAACTCGTTGCCAGCGGTGCTG
AAGGTCATATTAATAGCGGAAAAAGGACATGAAATGGAGTCGCTTTCACG
GAAGACGAAAATGGAATGGATGAGGTGGGACGAAAATGGAACAACTCTCA
AAACGTACTTAGTGAAGGTGTTAATATATATAGTACTATTAATAATATCG
GTATACCTGGTATTAGTAGTCGTGGGAGTTGGGTGCTCTGAGCGGTAGTA
CTATTCATAGTAGTAGAAATGACGATGGAGGTCTCATGGTGGAATCGCTT
GAGTGGAGATGGAAACGTTCGACCGTGGAATGACCTTGTGCATCCGCTTT
CATGCCACATTGCAAGGAACGGTGCGGATGTGGTTGGTTCGCAATAAAGG
TCATGGACTGTTTTTGATTTCTCCTCGCGCTCTTTTCTGTGGCATGTCAT
GCCGTACGCCCAAGCACAGCACCTTTTGCCCGAAAGTACCAGACCGCGCG
AAATTCCCAGCGATCCCGAAATTTAACAAGGGCTGCGACATCTCTCCAGT
CGAAACCGTGGGGAATGAATCACGTTAGATAACCCGATACTCTTCATATC
GTACGTATATTGGGGGAAAAGCGCCTCGCAGCGGAGGACTGAATTCCTCG
AAAGCATGATCATCGAGGCAGCCCACGGTCAAAAGCATGATCATCGCATA
CACTATTAATATTAATATACGAGGGATAGCTCTCCATCATGCTATGCTAC
ACTTACTAATAATATTAAAACTGTATAAATACGCCGTGTCATGTCATGTC
ATGTCTGCTGCATGGGGAGCAGCTCTACACCAATGCTCAAATATATATAG
TATATATGTATATTTATTTTATTTATTTATTTTTCTTCTTCTTCTACTGT
TCGTACTATTAATTCCAATACAACGAAAGAAGATACTGTAATCAGAGATA
GCCTCTTAACGCCACTTCATTTTTTGCATCAAAGACCAGTTCAACGATTG
GGGGGGGGCAGGGGATGTAACATTTTTGTCCCCGTTTTGGGAAGAAACGG
GACGAAAATAGCCCCTACCGGGGGCATATTTGACCAACCCCCTGGTTAAA
TGCGATAAATTCAGGGCAAGCTTGCCGAATATGTCGGTGATCATGTAGTT
TCATCCCCGGAGCGGGCTATTTTGGTGACCTCCCCGGGGACGAAATCGTC
GTATCCCCGCCCTCCCCAATCGTTGAACCCCTCCAAAGCCTCATTTTTTT
TGCGTCCATTTTGTCAGTTGGGGACGTGTGTTGTTGGGTTCGAAAGGTCT
ATCTATCGGCAACAGAGCAAGAAGAACGAAAAGACTCAAGTATTATATTA
TAGATTTATATTATAGCTTTTTTTTTCTTTTCTTTTTTTCTGTAATCTGA
CTTAGAGCCGATGGACCTAATGATTACCATCCTGCCTGTGGCCTCAAAGT
ATCTTCCCATCTCTCCCCGGTTCACGCCTTACATTTTTTTTTATCGCGAT
GCAAGTTCAGCAATCTTACAACTCGTCAACCAATGGTTGAATTTTACTTA
CTCACGTTCCCACGCTTTCCGTTACGAAAGAAAGAACACATATCCTGCTT
TGGTAAGAATCGAACTCACGACTTCCGCACTAGCAGGTGTGCAGGCTACC
TTCTAGACCACTAGGGCGACGAGCGGTAATAAGAGTGTTTAACAAGGGGG
GGGGGGGGGTATGGCACGCTTACGTTTTAAATAATTGTACTCGTATGTAG
ACTGTCTTGCGAGATGACACCTTAGGAGACCTTAGGAGACCTTAGGACAT
CCTGTAGCACGCGGAAGACAGCATGTCTTCTGGGTAAAAAATGCACACGT
GCGGCGCTTGCTCCTAAATTGGCAGGACCATACAACGGCAAATGGACATG
TTTGACATGCTCTTTCCATCTTTTCGATGACAGCCATGGGGACTATCGAG
CCCTCAAGGCGAAACGCTACCGTCCGCTTCTCCTAGGTTCTCATCGCTGA
CGACCCGCCGTATCGCCCTCCCACTTGGTTGTCTTGTGTATCTTTTCAGG
CTCGACTGGAGGGTGAATTGACTCAGAAGGTGGAAAAATTCAGGAAGAGG
CTCAGCGAAACCGATCCCGTGTCGGGCGCGTCGAGATATGGCGAGAGCAT
GACGACCAAGGTATGTGGCCTCGTTGCGACTACTATTATATTAATAGAAA
GTACGGGGAGTTTTTTAACCTTTCATGACCGACACGGAAATACGATGTAT
GAAAGTGCGTGGAGGATGACTGCTTGGATCGGCTGGAAGGGTTCGAAATG
AAAGGTTGACAGGCGCATTGCTTAAACGTTGTAGGTTCGGCTCACTCCGC
AAGAGAATGATCATTTCTCTCCTTCCTGCCATCTAAGACCAAATATTTTA
AACAGTGATTTTTTTTTTGCGTTTGCGTTTGCGTTTGCCAGGCCCGCGTA
TCCTTTCGTTTCAAGCATTGGCAGTTGCAGTCGCTGGTTCAAGAATTTAT
GTCCGGTCGGCTTTTGAGCCCCCCGCCCCCCGATGTATCCGCGGCTATAT
GAAGATCGACCAGCGCGCGCGCATGACACGCCCCAGCCCCTCCCCCCCCC
TAAAGGTAACTGCTTTGGCTGCTAAGCATGAGGATCTCCTCCAGCAACTG
CCGCGCGTAGAAGCGGCGATCATGGCACAGGTTTCGCAACACGATTCGCG
CATGGTCGCTGTTACGTCAGAAGGGCAAAAGGTTGGTTACGCGCTGCGGC
GTACACAAACGATTTACGGCGGCATCTATTGAAACGTCGTTCGAACTCGG
CTTCGCAGGGGACCAACGCGAGGCCATCAGTACCGGCTCGGTCGTTTTTC
GCGAGATGCGCGCGGAATATGACGCCGGAATGAGTCCTTTTCGTGTACTG
GTGTGTTGGATACTGAGCTGAAGCTATCGCTCAGTCGATCGGAGGAGGAG
GAGGAGGAGGAGAGGTGCGCCCTAACTGCCATCGTTATACTCGTGTACCA
GTACCCCTTGATCCCGCCACCCTCATGCGTGCAATGGCCGTGTCTATCGG
CGTGGTGTCTCGCTTCTGCAGCTAGAGGCCGAGGCGCGGCTGCGCGAGGA
GGCTCTTTCGCGTATTCGGACGGCAGAGGAGGAAGAGAAAAGGCGCAGAG
CGGTGAGCACCGTATCCTGCGCGAACTCGTGGTCCACGCTCAAACGCCTC
CCCCCTCTCGCATGGTGAAAGCTACCACGATTACTGCACGTCGTGCCAAC
TTCGATCGCCATTGTTGTTGCGCCGACCCGGACCGAATCTCTGCATCTTC
AAAGTTGGCGACGAGAAGCATTCTTGACCGCGAACGTGAGCGCCTCGCGG
CGGAAGCTCTCCGTAGTCGGGAGGAGCGGCAGCTCGCTGCCGAACGGGAG
AAAGCGAGGCTAGCCGAGGACAAGGAAAGGTGGGCGCTCATTGACTTTTG
CCCAAGTAGTAAAACTCTTATTAAATATATATATATATGTCGGGTGTCGT
AAGAAGTATGGACCCTGAGCACCTGCTGAACGAAAGAAAAAATGAGGGAT
TGGGTTACTTTATTGCCTGGTAGGTATTTTCTGTCGAGATCCTGATCTAG
ACGTACATACCGTGACCGATTGCGCAGACGAGAGCAGGAGGCGCTGGAGT
TGACAAGATCGGTTGCGGTCGGGGCGGCGGGGGTCGAGGACGGCTTGCGG
CGCATCGACGACGCTTGCGGTGGTAATCGCTCGGAAAAGAAAGCGGCGGT
GGAGGCATTGCACCAGGCAAGAGAGTTCTCGCATTCGACAAAGAGTGGAT
TTAATTGTTAAGGGAGTCTGACGAGGAAACTTTTACTCTTGCAGCGGTCC
ACTGGCCGGGGAAAAAAACGTGGGGGGAGCAACCAAGACCATCTGTATAA
ATAAGCGCTTTGCCGATTGATGCACTCACGTGCTTGCAGATCTTGCGTAA
CGTGGCGACTAATCCAGAGGATCCACGGTTTCGACGAATCAAACGAGACA
ATGAAAACTTTCGGCGAGCGCTGGGGCGCTTCGAAGGAGGAATTCAGATT
CTGGTGTCTTCTGGCTTTCGGATGCAGGCGAGAACCACCAAACTAGCTTT
TACGACCGTGAGATTGGGGTCAGCCTATGTATGTGGGCCCTTTATGGCGA
TTCTTTTTGTTTTTGTTTTTGTTTTTCGTTTCTTTTTATCTCGACATCTT
CATACGGAGCAGTTTCTCTATTAATAGTTTAGCGGCAAGTGAACGATCAG
GGTCTGTCTGTTTCTCAACATCTCTATTCTAATATAGTATCAATTAGTGC
TGGAGGACTCTAGAGCCTTCTATTTTTCAGTCATTGCAGCACAAAGGTGT
TTAGTTTTCTTCCCATTTTTTTGTCCTGCTTTTTTTTTCTCCTTCTCTGC
ACTCCACAAAACTTTTGAGCTATATTAATATAAATATTGATATGAACAGA
GAACGTGCCGAGTGTGGGCGTGCAACTTACCGAACTGCTACTGTGCTGTT
TGTAACTCTTCTGTCTGTTGCAGCAGACATAAGTCTGTCGAATCTGGTCT
ATTTATCTCTTTGTTCCTACCGTTGAGAGTCAATTTCCACAATCATGTCG
ATGGGACCCTTGATGAGGACTAGACACGTTGCATGACGGTTCTCTCCTAA
AAAAGCTTCTCCGTGGTAATGGTCGAATGATTCGGACCATCAAATTATTC
ATGTATTATATTTTTTGTTGAAACTTCACAGAGCCACAACCGTCACTCGC
TCGGTATTTCTGTTTCAATATTTCAGTCAGTCACCAAATAATTGCGAAAG
CCGCTCCAGGCAGGATTTATGTCTTGTATGGTCACACATACAGTAGTATA
GCAAGAGCATGGACCAACCGCATGAAGTTGCCAATCCTGCTCGTGGTCCA
ACAGGTGGAGGAAGGCCAAACCGTCCTTGTGATGTACGAGCCGGATCTGT
CAGAAGACATGGACGGCTGGAGCGAATGGTACAAGAATATCACGGAGGCG
GCAGAGAGGCTCAAGCTCGAGCTGGACGAGAGATTCTGAGGAATTCGCCG
GCACCCTCAGCGTGACTCGTTTCCCGGCATTGCCTCGAACTTGTTACGCG
TTGCCTCCTCCGTTCGATGATTAAATATTATATTGCGAACATCCCTC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig10:200235..216131-

>mRNA_F-serratus_M_contig10.55.1 ID=mRNA_F-serratus_M_contig10.55.1|Name=mRNA_F-serratus_M_contig10.55.1|organism=Fucus serratus male|type=CDS|length=2094bp|location=Sequence derived from alignment at F-serratus_M_contig10:200235..216131- (Fucus serratus male)
ATGACGGAGTTCAAGAAAACATCCGGAGAGCTGGATGTACTCGAGAACCT
TCTTTTGACTCTACTCGACGATCCTTCCACCTCACCGCCAGATAAATTGG
CGACGTTCTCGACGTCAAAGATGACGGAGTTCAAGAAAACATCCGGAGAG
CTGGATGTACTCGAGAACCTTCTTTTGACTCTACTCGACGATCCTTCCAC
CTCACCGCCAGATAAATTGGCGACGTTCTCGACGTCAAAGGCTCGACTGG
AGGGTGAATTGACTCAGAAGGTGGAAAAATTCAGGAAGAGGCTCAGCGAA
ACCGATCCCGTGTCGGGCGCGTCGAGATATGGCGAGAGCATGACGACCAA
GGCTCGACTGGAGGGTGAATTGACTCAGAAGGTGGAAAAATTCAGGAAGA
GGCTCAGCGAAACCGATCCCGTGTCGGGCGCGTCGAGATATGGCGAGAGC
ATGACGACCAAGGTAACTGCTTTGGCTGCTAAGCATGAGGATCTCCTCCA
GCAACTGCCGCGCGTAGAAGCGGCGATCATGGCACAGGTTTCGCAACACG
ATTCGCGCATGGTCGCTGTTACGTCAGAAGGGCAAAAGGTAACTGCTTTG
GCTGCTAAGCATGAGGATCTCCTCCAGCAACTGCCGCGCGTAGAAGCGGC
GATCATGGCACAGGTTTCGCAACACGATTCGCGCATGGTCGCTGTTACGT
CAGAAGGGCAAAAGCTAGAGGCCGAGGCGCGGCTGCGCGAGGAGGCTCTT
TCGCGTATTCGGACGGCAGAGGAGGAAGAGAAAAGGCGCAGAGCGCTAGA
GGCCGAGGCGCGGCTGCGCGAGGAGGCTCTTTCGCGTATTCGGACGGCAG
AGGAGGAAGAGAAAAGGCGCAGAGCGTTGGCGACGAGAAGCATTCTTGAC
CGCGAACGTGAGCGCCTCGCGGCGGAAGCTCTCCGTAGTCGGGAGGAGCG
GCAGCTCGCTGCCGAACGGGAGAAAGCGAGGCTAGCCGAGGACAAGGAAA
GTTGGCGACGAGAAGCATTCTTGACCGCGAACGTGAGCGCCTCGCGGCGG
AAGCTCTCCGTAGTCGGGAGGAGCGGCAGCTCGCTGCCGAACGGGAGAAA
GCGAGGCTAGCCGAGGACAAGGAAAGACGAGAGCAGGAGGCGCTGGAGTT
GACAAGATCGGTTGCGGTCGGGGCGGCGGGGGTCGAGGACGGCTTGCGGC
GCATCGACGACGCTTGCGGTGGTAATCGCTCGGAAAAGAAAGCGGCGGTG
GAGGCATTGCACCAGGCAAGAGAACGAGAGCAGGAGGCGCTGGAGTTGAC
AAGATCGGTTGCGGTCGGGGCGGCGGGGGTCGAGGACGGCTTGCGGCGCA
TCGACGACGCTTGCGGTGGTAATCGCTCGGAAAAGAAAGCGGCGGTGGAG
GCATTGCACCAGGCAAGAGACGCTTTGCCGATTGATGCACTCACGTGCTT
GCAGATCTTGCGTAACGTGGCGACTAATCCAGAGGATCCACGGTTTCGAC
GAATCAAACGAGACAATGAAAACTTTCGGCGAGCGCTGGGGCGCTTCGAA
GGAGGAATTCAGATTCTGGTGTCTTCTGGCTTTCGGATGCAGGCGAGAAC
CACCAAACTAGCTTTTACGACCCGCTTTGCCGATTGATGCACTCACGTGC
TTGCAGATCTTGCGTAACGTGGCGACTAATCCAGAGGATCCACGGTTTCG
ACGAATCAAACGAGACAATGAAAACTTTCGGCGAGCGCTGGGGCGCTTCG
AAGGAGGAATTCAGATTCTGGTGTCTTCTGGCTTTCGGATGCAGGCGAGA
ACCACCAAACTAGCTTTTACGACCGTGGAGGAAGGCCAAACCGTCCTTGT
GATGTACGAGCCGGATCTGTCAGAAGACATGGACGGCTGGAGCGAATGGT
ACAAGAATATCACGGAGGCGGCAGAGAGGCTCAAGCTCGAGCTGGACGAG
AGATTCTGAGTGGAGGAAGGCCAAACCGTCCTTGTGATGTACGAGCCGGA
TCTGTCAGAAGACATGGACGGCTGGAGCGAATGGTACAAGAATATCACGG
AGGCGGCAGAGAGGCTCAAGCTCGAGCTGGACGAGAGATTCTGA
back to top