mRNA_F-serratus_M_contig10.52.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: A0A6H5KH81_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH81_9PHAE) HSP 1 Score: 247 bits (631), Expect = 1.670e-69 Identity = 139/194 (71.65%), Postives = 157/194 (80.93%), Query Frame = 3 Query: 3 GGGMRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQANGTAVYHDVLPTAGKRFIDLAQLPRALGFELPW-PGKRSGGNSKGNSGRQEQQGRRNSSNPYESRMEASTESARVIRLDFLLEDVVERLHGLDFSAFYTNDRRQPLHVVASGVSSMGSVSLASRRGHFSTLEELATCIRASMLVPGLA 581 GGGMRGCVAAGM SCLHF+G+ADSFD VYGASAGSL+GAYFVSRQ+NGTAVYHDVLP+AG RFID+A+ P+ALGFELP P K SGG S +E++G E+ AS ARVI LDFLL+DVV R+HGLDF AF ND+ QPLHVVASGVSSMG+VSLASRRG+FSTL+EL CIRASMLVPGLA Sbjct: 383 GGGMRGCVAAGMASCLHFLGMADSFDCVYGASAGSLIGAYFVSRQSNGTAVYHDVLPSAGARFIDMAKFPQALGFELPKVPRKGSGGPSD-----EEERG------ALEAARAASF--ARVIGLDFLLKDVVGRVHGLDFDAFSANDKLQPLHVVASGVSSMGTVSLASRRGYFSTLDELTGCIRASMLVPGLA 563
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: D8LUD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUD0_ECTSI) HSP 1 Score: 238 bits (608), Expect = 3.060e-64 Identity = 167/350 (47.71%), Postives = 197/350 (56.29%), Query Frame = 3 Query: 3 GGGMRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQANGTAVYHDVLPTAGKRFIDLAQLPRALGFELPWPGKRSGGNSKGNSGRQEQQGRRNSSNPYESRMEASTESARVIRLDFLLEDVVERLHGLDFSAFYTNDRRQPLHVVASGVSSMGSVSLASRRGHFSTLEELATCIRASMLVPGLAGSPRPVPGDEGANSASRQPPSPXXPRTTVERNQNRSVDTLAGGEVETRPRE-------------SWAVRAWRRSPRTRSFWEGRARGGRRYCGDTGGGASSASAPALTRAQEDADVSELLVDAMVFEPLPYRSAVEDGCTDVLVLCTRPKGSQVLGK 1013 GGGMRGCVAAGM SCLHF+G+ADSFD VYGASAGSL+GAYFVSRQ+NGTAVYHDVLP+AG RFID+A+ P+ALGFELP ++ G + G +E+ G E+ AS ARVI LDFLL+DVV R+HGLDF AF ND+ QPLHVV V+++ S + + + E T + AS V R G E N A TT R L GG+ E S R P + E + G GGG D SELLVDAMVFEPLPYRSA+EDGCTDV+VLCTRP+GSQVLGK Sbjct: 262 GGGMRGCVAAGMASCLHFLGMADSFDCVYGASAGSLIGAYFVSRQSNGTAVYHDVLPSAGARFIDMAKFPQALGFELPKVPRKGNGGASG----EEELG------ALEAARAASF--ARVIGLDFLLKDVVGRVHGLDFDAFSANDKLQPLHVVEERVTTLPPTS-GTDSDNRAGGEGRETVVTASSPVD---REGREESGQESGNGAGEL-------ATTQPR-----AGFLGGGKGEAMKEXXXXXXXXXXXXXXSLRKEGEREVPVAAAPAEALESSAGKKEGTIGGG----------------DASELLVDAMVFEPLPYRSAIEDGCTDVVVLCTRPEGSQVLGK 567
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: A0A835Z3M7_9STRA (Acyl transferase/acyl hydrolase/lysophospholipase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3M7_9STRA) HSP 1 Score: 187 bits (476), Expect = 4.570e-51 Identity = 130/339 (38.35%), Postives = 158/339 (46.61%), Query Frame = 3 Query: 3 GGGMRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQANGTAVYHDVLPTAGKRFIDLAQLPRALGFELP-----WPGKRSGGNSKGNSGRQEQQGRRNSSNPYESRMEASTESARVIRLDFLLEDVVERLHGLDFSAFYTNDRRQPLHVVASGVSSMGSVSLASRRGHFSTLEELATCIRASMLVPGLAGSPRPVPGDEGANSASRQPPSPXXPRTTVERNQNRSVDTLAGGEVETRPRESWAVRAWRRSPRTRSFWEGRARGGRRYCGDTGGGASSASAPALTRAQEDADVSELLVDAMVFEPLPYRSAVEDGCTDVLVLCTRPKGSQV 1004 GGGMRGCV+AGMV+ LH +G AD+FD VYG+SAG LVGAYF+SRQ NGTAVYHDVLP AG RF+D ++L ALG W G R P++ V LDFL+ VV RL LD+++F+ N+R QPL+VV SG+ SM S +L S +GHF+TL ELA C+RASMLVPG+ G PG QP DA++FEP+PYRSA DGCT V+VL TRP GSQV Sbjct: 32 GGGMRGCVSAGMVTALHRLGAADAFDAVYGSSAGCLVGAYFISRQTNGTAVYHDVLPEAGARFLDKSRLVAALGATTSMRPRAWAGLRP-------------------RLPHD-----------VFNLDFLMTTVVGRLWPLDWTSFWANNRHQPLNVVVSGLLSMDSHTLTSAKGHFATLPELARCMRASMLVPGMTGPLVTFPG--------HQP---------------------------------------------------------------------------------------FADALIFEPMPYRSAAADGCTHVVVLRTRPDGSQV 245
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: A0A6H5KFE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFE2_9PHAE) HSP 1 Score: 186 bits (471), Expect = 1.290e-49 Identity = 98/176 (55.68%), Postives = 129/176 (73.30%), Query Frame = 1 Query: 1105 KPGIYETRVVRRYFERHRGKTEAASEISDHVQQLKHLRTYAEDALVLGEGSRTGMPQAVPRGGPGEGREAFIVAVAPEASCEEVSQLEMERKKILQGCRDGFAACYELFGGGALS---SRRDTGSGDGGGHDLYAGARVRSGAEVALEYFPDSILAVSTDLDGAYFQPGHVIGKQR 1623 KP IYE+RVV+++FE+H + S IS+++QQL+HLR YAEDALVLGEGSRTG+ QA P+GG GEGREAF++A+AP A+ +EV QLEM+R+ ILQGCRDGFAACY+ F G A S + D G+ D+ G RSGAE+ALEYFPDS+L+ D++ Y + GH+I + Sbjct: 35 KPSIYESRVVKKFFEQH-DDPDTTSGISNYLQQLEHLRVYAEDALVLGEGSRTGVAQAAPKGGAGEGREAFLLAIAPAAASKEVGQLEMDRRVILQGCRDGFAACYDAFVGPAKSLAAAAADDGA------DVV-GPLARSGAEMALEYFPDSLLSTLADINATYLETGHLISDNQ 202
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: A0A836CD71_9STRA (Acyl transferase/acyl hydrolase/lysophospholipase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD71_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.460e-38 Identity = 118/355 (33.24%), Postives = 155/355 (43.66%), Query Frame = 3 Query: 3 GGGMRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQAN----GTAVYHDVLPTAGKRFIDLAQLPRALGF-ELPWPGKRSGGNSKGNSGRQEQQGRRNSSNPYESRMEASTESARVIRLDFLLEDVVERLHGLDFSAFYTNDRRQPLHVVASGVSSMGSVSLASRRGHFSTLEELATCIRASMLVPGLAGSPRPVPGDEGANSASRQPPSPXXPRTTVERNQNRSVDTLAGGEVETRPRESWAVRAWRRSPRTRSFWEGRARGGRRYCGDTGGGASSASAPALTRAQEDADVSELLVDAMVFEPLPYRSAVEDGCTDVLVLCTRPKGSQVLGKVRKSGLSPERSLV 1052 GGGMRGCV+AGMV+ + +G D D VYG+SAGSLVGAY ++ Q G +VY+D L AG+ FID L RA+G L P R G + A VI+LD+LL DVVERL LD+ F+ R QP+++VASG+ S SV L S GHF TL EL C+RASML+PG+AG +PG V E LVD+ ++EP+PYR+A+ DGCT V+V+ +RP G ++GK + PER + Sbjct: 111 GGGMRGCVSAGMVASIMSVGAMDCVDAVYGSSAGSLVGAYAIAAQPGMPRLGCSVYYDALTNAGRSFIDTRFLGRAMGVGALAVPFTRRAGLRD---------------------LARDRIGAPVIKLDYLLGDVVERLRPLDWERFWERQRDQPMNIVASGMHSHSSVVLNSAGGHFKTLRELTACMRASMLLPGIAGPMVTLPG----------------------------------------------------------------------------------------------VDEPLVDSQLYEPIPYRAALNDGCTHVVVMRSRPDGCSLIGKPKL----PERMIA 346
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: A0A4D9CTQ0_9STRA (PNPLA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTQ0_9STRA) HSP 1 Score: 154 bits (388), Expect = 5.110e-36 Identity = 114/336 (33.93%), Postives = 154/336 (45.83%), Query Frame = 3 Query: 3 GGGMRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQANGTAVYHDVLPTAGKRFIDLAQLPRALGFELPWPGKRSGGNSKGNSGRQEQQGRRNSSNPYESRMEASTESARVIRLDFLLEDVVERLHGLDFSAFYTNDRRQPLHVVASGVSSMGSVSLASRRGHFSTLEELATCIRASMLVPGLAGSPRPVPGDEGANSASRQPPSPXXPRTTVERNQNRSVDTLAGGEVETRPRESWAVRAWRRSPRTRSFWEGRARGGRRYCGDTGGGASSASAPALTRAQEDADVSELLVDAMVFEPLPYRSAVEDGCTDVLVLCTRPKGSQVLG 1010 GGGMRG V+AG + ++ +GL+D FD VYG+SAG+L+ A+FVS Q NGT +Y DVLP AGKRF+D AQL A+G LP E+ V+ L FL EDV+ LD+++F+ + QPL+VVAS + M S++L S +G F + E L C+++SM VPG+AG P + N RQ T ER + R+F DA+VFEP+P +SAVEDGCT ++ L TRP GS+VLG Sbjct: 178 GGGMRGAVSAGAAAAINLLGLSDGFDAVYGSSAGALIAAFFVSGQLNGTIIYSDVLPAAGKRFLDRAQLIPAMGL-LP-----------------------------------GVEAKPVLNLQFL-EDVIRNTVRLDWASFWAKNAVQPLNVVASSLDGMESLALRSDKGDFDSFESLIQCLKSSMCVPGVAGPPVFL------NVTCRQ---------TGERKE-------------------------------RAF----------------------------------------ADALVFEPIPLKSAVEDGCTHIVTLRTRPDGSEVLG 390
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: A0A7S2KR00_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KR00_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.430e-34 Identity = 113/340 (33.24%), Postives = 152/340 (44.71%), Query Frame = 3 Query: 3 GGGMRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQAN--GTAVYHDVLPTAGKRFIDLAQLPRALGFELPWPGKRSGGNSKGNSGRQEQQGRRNSSNPYESRMEASTESARVIRLDFLLEDVVERLHGLDFSAFYTNDRR-QPLHVVASGVSSMGSVSLASRRGHFSTLEELATCIRASMLVPGLAGSPRPVPGDEGANSASRQPPSPXXPRTTVERNQNRSVDTLAGGEVETRPRESWAVRAWRRSPRTRSFWEGRARGGRRYCGDTGGGASSASAPALTRAQEDADVSELLVDAMVFEPLPYRSAVEDGCTDVLVLCTRPKGSQVLGK 1013 GGGMRGCV+AGMV +H++GL D+FD VYG+SAGSL+GAYF+++Q G +Y+D L TAGK+FID +L RA+GF + P + +G+ V+ L FLL V+ LD+ F R QPL VVASG+ S +V +G F++LE+LA C+ ASML+PG+AG P ++W + A E L DA+V+EP+PYRSAVEDG T V+VL TR G+ V GK Sbjct: 192 GGGMRGCVSAGMVGAIHYLGLDDAFDVVYGSSAGSLIGAYFITKQLPWFGPEIYYDALTTAGKKFIDTKRLLRAIGFGMLNPVLLKDVIFRPKNGKP------------------------VLDLSFLLRRTVQEKKPLDWDKFVEKQRGGQPLKVVASGLKSEKAVVFDMEKGDFTSLEQLANCMHASMLLPGIAG------------------------------------------------------------PIMNAYWS-----------------NEGPADLFLENNHKKKEVEPLADALVYEPIPYRSAVEDGATHVVVLRTRADGADVTGK 430
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: A0A6H5KCB2_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCB2_9PHAE) HSP 1 Score: 147 bits (370), Expect = 2.190e-34 Identity = 106/347 (30.55%), Postives = 151/347 (43.52%), Query Frame = 3 Query: 3 GGGMRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQAN----GTAVYHDVLPTAGKRFIDLAQLPRALGFEL------PWPGKRSGGNSKGNSGRQEQQGRRNSSNPYESRMEASTESARVIRLDFLLEDVVERLHGLDFSAFYTNDRRQPLHVVASGVSSMGSVSLASRRGHFSTLEELATCIRASMLVPGLAGSPRPVPGDEGANSASRQPPSPXXPRTTVERNQNRSVDTLAGGEVETRPRESWAVRAWRRSPRTRSFWEGRARGGRRYCGDTGGGASSASAPALTRAQEDADVSELLVDAMVFEPLPYRSAVEDGCTDVLVLCTRPKGSQVLGK 1013 GGGMRGCV+AGM++ + +GL D+FD VYG+SAGSLVGAY ++ Q G +VY+D L G+ FID Q+ R++G L W G + + + V+ L++LL DVVE+ LD+ F+ QPLHV+ASGV S +V + S+ GHF TL EL C+RASML+PG+ G P T+ +V E LVD+ ++E +P+++A++DGCT VLV+ +RP G +LGK Sbjct: 62 GGGMRGCVSAGMIAAVSTLGLMDTFDAVYGSSAGSLVGAYAIAGQEGMPRLGCSVYYDTLTGTGRHFIDTRQIFRSMGLGLFGTVVTRWRGIKE--------------------------LVRQKWGSPVLNLNYLLHDVVEKQRPLDWEKFWKKQPTQPLHVIASGVISKKAVVMTSKGGHFGTLRELTECMRASMLLPGITG-----------------------PMVTLP-----------------------------------------------------------------------NVDEPLVDSQLYEQIPFQTALDDGCTHVLVMRSRPDGGNLLGK 288
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: A0A2C6KVE6_9APIC (Patatin family protein (Fragment) n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6KVE6_9APIC) HSP 1 Score: 149 bits (376), Expect = 6.450e-34 Identity = 112/336 (33.33%), Postives = 150/336 (44.64%), Query Frame = 3 Query: 3 GGGMRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQA--NGTAVYHDVLPTAGKRFIDLAQLPRALGFELPWPGKRSGGNSKGNSGRQEQQGRRNSSNPYESRMEASTESARVIRLDFLLEDVVERLHGLDFSAFYTNDRRQPLHVVASGVSSMGSVSLASRRGHFSTLEELATCIRASMLVPGLAGSPRPVPGDEGANSASRQPPSPXXPRTTVERNQNRSVDTLAGGEVETRPRESWAVRAWRRSPRTRSFWEGRARGGRRYCGDTGGGASSASAPALTRAQEDADVSELLVDAMVFEPLPYRSAVEDGCTDVLVLCTRPKGSQV 1004 GG MRGCV+AGM LH MG AD+FD V+G+SAGSLVGAYF+SRQ G +Y+D LP G++F+DL ++ R LG G + ++ LD LL D+V+R L++ F NDR+QPL +V SG+ S + L S G+ L L C+RASML+PGLAG +P A+ SR S P +S++ P R VSE L DA+++EP+PYRSA+ G VLVL +RP G +V Sbjct: 281 GGAMRGCVSAGMAVALHHMGFADAFDAVFGSSAGSLVGAYFISRQLPYEGAQIYYDWLPHMGRKFLDLRRIGRGLGLGFLLDGDIQD-------------------------FLLNRLGKPLLNLDVLLTDIVQRQQPLNWERFRANDRKQPLKIVTSGLWSQRPIVLDSGHGNVRDLPSLTACVRASMLLPGLAGPVVHLP----AHPDSRNLKSHFLPLI-----------------------------------------------------------ASSALPRFARQAPCGLVSEPLADALLYEPVPYRSAIAQGYDQVLVLRSRPDGKRV 528
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Match: A0A0G4ICC8_9ALVE (PNPLA domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4ICC8_9ALVE) HSP 1 Score: 147 bits (372), Expect = 1.250e-33 Identity = 116/341 (34.02%), Postives = 161/341 (47.21%), Query Frame = 3 Query: 3 GGGMRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQAN--GTAVYHDVLPTAGKRFIDLAQLPRALGFELPWPGKRSGGNSKGNSGRQEQQGRRNSSNPYESRMEASTESARVIRLDFLLEDVVERLHGLDFSAFYTNDRRQPLHVVASGVSSMGSVSLASRRGHFSTLEELATCIRASMLVPGLAGSPRPVPGDEGANSASRQPPSPXXPRTTVERNQNRSVDTLAGGEVETRPRESWAVRAWRRSPRTRSFWEGRARGGRRYCGDTGGGASSASAPALTRAQEDADVSELLVDAMVFEPLPYRSAVEDGCTDVLVLCTRPKGSQVLGKVR 1019 GGGMRGCV+AGM + +H +G+ FD VYG+SAGSLVGAY ++ Q GT VY D+LP A + FI ++ R++G GG+ + V+ LDFLL+ VV+ + LD+ +F+ D+ PLHVV SG+ S +VSL SR G+F + L C+RASML+PG+AG P P RN S +A E PR W+V + GR G E + DA++FEP+PYRSA+++G + LVL TRP G +V GK++ Sbjct: 173 GGGMRGCVSAGMATAIHCLGMTRCFDSVYGSSAGSLVGAYLIAGQVPEVGTRVYFDILPEAKEEFISKRRILRSVGLGP------LGGDLRA--------------------FVVDRLGPPVLSLDFLLKKVVQEVLPLDWESFWKGDKTIPLHVVTSGLCSESAVSLTSRDGNFKDIHTLGECMRASMLLPGVAG------------------PLVRLPLECSGRNVVVSAG-VAATEDHRLPR--WSV-------------DSNNSNGREIRG------------------------EPMADALLFEPIPYRSALKNGASKCLVLRTRPDGLKVTGKMK 429 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.52.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.52.1 >prot_F-serratus_M_contig10.52.1 ID=prot_F-serratus_M_contig10.52.1|Name=mRNA_F-serratus_M_contig10.52.1|organism=Fucus serratus male|type=polypeptide|length=356bp MRGCVAAGMVSCLHFMGLADSFDGVYGASAGSLVGAYFVSRQANGTAVYHback to top mRNA from alignment at F-serratus_M_contig10:62359..72118- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.52.1 ID=mRNA_F-serratus_M_contig10.52.1|Name=mRNA_F-serratus_M_contig10.52.1|organism=Fucus serratus male|type=mRNA|length=9760bp|location=Sequence derived from alignment at F-serratus_M_contig10:62359..72118- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:62359..72118- >mRNA_F-serratus_M_contig10.52.1 ID=mRNA_F-serratus_M_contig10.52.1|Name=mRNA_F-serratus_M_contig10.52.1|organism=Fucus serratus male|type=CDS|length=2136bp|location=Sequence derived from alignment at F-serratus_M_contig10:62359..72118- (Fucus serratus male)back to top |