mRNA_F-serratus_M_contig1.5.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1.5.1 vs. uniprot
Match: D7G259_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G259_ECTSI) HSP 1 Score: 261 bits (667), Expect = 5.280e-70 Identity = 151/318 (47.48%), Postives = 209/318 (65.72%), Query Frame = 3
Query: 201 LTTTLNAQKFASRWRHKAMPSKRLETYARRGIVQNRYVGEALEQAMGLVDASVAHKRKIRTLFAELETSEKYANEGDGQQEEEVNPTVRVAWQEVRMHEIRVAKKINDLRHNHAFEDTILPVRTIQQLETYCTAIVALLKTYIAAGVRMTAPEIVRIVTQTNFIAATAGDLAGWAGEAMSMLEAERERVRDLHGRVAEVSREAIGAHKEIIKLEAKLFDERKQIKKERNILERLKSESESGDSRTLILEIEDSVLAVGMKLIRLDEDGNPLSGVQSALRMVGMLRRTCLSQQGHIARIEVSGGKLKADLEQAELTISN 1154
+ L + F RW HK PS+RL+ +A+RG++ R +GE L +A+GLVDASVAH+R+I+ LF+ELE+ E+ + D EEEV V++AW E R EIRV+KK+N+LR + ++ I PVR QQLE Y + VA+LK+Y+ G R+TA EI+ +++Q F A TA L+ WAGEAM L ER+R LH A+VSREA A KEI+ LEAK+F RK+++ + R+K+ES GD R + I+DSV A G++L+ D G PLS Q+A M+ LR TC+SQQ HI R+E + K DLEQAE+TI +
Sbjct: 1 MMVRLFSSWFVYRWHHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIKNLFSELESRERTLEQMDNNGEEEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRATQQLEAYLLSGVAVLKSYMTTGARITATEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHALHRENAQVSREATLAQKEIMSLEAKIFHTRKELESAKAYAARIKAES--GDMRVVFGAIDDSVTAAGLELMTHDASGEPLSATQAAFGMIKKLRETCISQQDHIGRLEFFVERGKLDLEQAEMTIKD 316
BLAST of mRNA_F-serratus_M_contig1.5.1 vs. uniprot
Match: A0A6H5JUH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH9_9PHAE) HSP 1 Score: 249 bits (637), Expect = 2.950e-63 Identity = 144/299 (48.16%), Postives = 196/299 (65.55%), Query Frame = 3
Query: 201 LTTTLNAQKFASRWRHKAMPSKRLETYARRGIVQNRYVGEALEQAMGLVDASVAHKRKIRTLFAELETSEKYANEGDGQQEEEVNPTVRVAWQEVRMHEIRVAKKINDLRHNHAFEDTILPVRTIQQLETYCTAIVALLKTYIAAGVRMTAPEIVRIVTQTNFIAATAGDLAGWAGEAMSMLEAERERVRDLHGRVAEVSREAIGAHKEIIKLEAKLFDERKQIKKERNILERLKSESESGDSRTLILEIEDSVLAVGMKLIRLDEDGNPLSGVQSALRMVGMLRRTCLSQQGHIARIE 1097
+ L + F RW+HK PS+RL+ +A+RG++ R +GE L +A+GLVDASVAH+R+IR LF+ELE+ EK + D E EV V++AW E R EIRV+KK+N+LR + ++ I PVR IQQLE Y + VA+LK+Y+ G R+T EI+ +++Q F A TA L+ WAGEAM L ER+R LH A+VSREA A KEI+ LEAK+F RK+++ + R+K+ES GD R + I+DSV A G++LI D G PLS Q+A M+ LR TC+SQQ HI R E
Sbjct: 1 MMVRLFSSWFVYRWQHKVTPSRRLKKHAQRGLLVERPIGETLTKAVGLVDASVAHQRRIRNLFSELESREKTLEQTDNNGEGEVPAVVQMAWHESRTQEIRVSKKMNELRDDADCDNAIAPVRAIQQLEAYLLSGVAVLKSYMTTGARITVTEILSLMSQVTFAAHTAEALSRWAGEAMETLGRERDRAHSLHRENAQVSREATLAQKEIMSLEAKIFHTRKELESAKAYAARIKAES--GDMRAVFGAIDDSVTAAGLELITHDASGEPLSATQAAFGMIKKLRETCISQQDHIGRWE 297 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1.5.1 >prot_F-serratus_M_contig1.5.1 ID=prot_F-serratus_M_contig1.5.1|Name=mRNA_F-serratus_M_contig1.5.1|organism=Fucus serratus male|type=polypeptide|length=1365bp MQSRRGPASYIPFAGVGSGPASPDQAVPVGNNLTTTLNAQKFASRWRHKAback to top mRNA from alignment at F-serratus_M_contig1:165708..187195+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1.5.1 ID=mRNA_F-serratus_M_contig1.5.1|Name=mRNA_F-serratus_M_contig1.5.1|organism=Fucus serratus male|type=mRNA|length=21488bp|location=Sequence derived from alignment at F-serratus_M_contig1:165708..187195+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1:165708..187195+ >mRNA_F-serratus_M_contig1.5.1 ID=mRNA_F-serratus_M_contig1.5.1|Name=mRNA_F-serratus_M_contig1.5.1|organism=Fucus serratus male|type=CDS|length=8190bp|location=Sequence derived from alignment at F-serratus_M_contig1:165708..187195+ (Fucus serratus male)back to top |