mRNA_F-distichus_contig105029.435.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: A0A6H5L299_9PHAE (Beta-galactosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L299_9PHAE) HSP 1 Score: 148 bits (374), Expect = 1.020e-39 Identity = 65/84 (77.38%), Postives = 69/84 (82.14%), Query Frame = 1
Query: 1 SGTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDAGASDPPIYTNTVYPFPNRPPYAPRSNPTGLYRRSLTLPSEW 252
SGTWKF LV GV+ +P GFE P F D SWEDIDVPGHWQLQDAG+ DPPIYTNT YPFPN PPYAPR NPTGLYRR LP+EW
Sbjct: 133 SGTWKFLLVSGVSASPGGFEDPGFSDGSWEDIDVPGHWQLQDAGSRDPPIYTNTNYPFPNHPPYAPRENPTGLYRRRFALPAEW 216
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: A0A2R6WIM3_MARPO (Beta-galactosidase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WIM3_MARPO) HSP 1 Score: 95.5 bits (236), Expect = 4.370e-21 Identity = 44/84 (52.38%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 1 SGTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDAGASDPPIYTNTVYPFPNRPPYAPRSNPTGLYRRSLTLPSEW 252
SG WKF L E P GF+ +F D SW + VP +WQ+ D PIYTN VYPFP PP P NPTG YRRS LP+EW
Sbjct: 167 SGYWKFHLAPKPREVPLGFQLVDFDDGSWSSLPVPSNWQMH---GFDQPIYTNIVYPFPINPPKVPEQNPTGCYRRSFKLPTEW 247
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: A0A1V6KG37_9DELT (Beta-galactosidase n=2 Tax=Bacteria TaxID=2 RepID=A0A1V6KG37_9DELT) HSP 1 Score: 94.4 bits (233), Expect = 1.110e-20 Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 1 SGTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDAGASDPPIYTNTVYPFPNRPPYAPRSNPTGLYRRSLTL 240
+G+WKF + +P GFE P+F D +WEDI+VP HWQL+ G P YT+ YPFP RPP+ PR+NPTG+YRR L
Sbjct: 52 NGSWKFLFLEAPELSPFGFEKPDFDDGAWEDIEVPSHWQLKGHGR---PHYTDLYYPFPVRPPFVPRANPTGIYRRQFFL 128
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: A0A7K1Y1D7_9SPHI (Beta-galactosidase n=1 Tax=Pedobacter sp. HMF7056 TaxID=2695274 RepID=A0A7K1Y1D7_9SPHI) HSP 1 Score: 92.8 bits (229), Expect = 3.850e-20 Identity = 44/85 (51.76%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 1 SGTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDAGASDPPIYTNTVYPFPNRPPYAPRS-NPTGLYRRSLTLPSEW 252
+GTWKF+ V +TPA F P + W+DI VPG+WQLQ G DPP++TN YPFP PP P++ NPTGLYR + T+P W
Sbjct: 68 NGTWKFKWVRTPLKTPADFFMPGYNVSRWDDIRVPGNWQLQ--GDYDPPVFTNIRYPFPADPPRVPKTDNPTGLYRTTFTIPGGW 150
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: M0LXZ5_9EURY (Beta-galactosidase n=2 Tax=Halococcus TaxID=2249 RepID=M0LXZ5_9EURY) HSP 1 Score: 92.4 bits (228), Expect = 5.250e-20 Identity = 43/84 (51.19%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 1 SGTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDAGASDPPIYTNTVYPFPNRPPYAPRSNPTGLYRRSLTLPSEW 252
+G W F LV A+TP GF P+F D W+++ VP +WQ G P YTN VYPFP PP P NPTGLYRRS T+P W
Sbjct: 46 NGFWNFSLVETPADTPDGFHDPDFDDGDWDELRVPRNWQTAGHGE---PHYTNVVYPFPVDPPNVPTENPTGLYRRSFTIPEGW 126
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: A0A812UZX4_SYMMI (Beta-galactosidase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UZX4_SYMMI) HSP 1 Score: 92.4 bits (228), Expect = 5.290e-20 Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 4 GTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDA-GASDPPIYTNTVYPFPNR-----PPYAPRSNPTGLYRRSLTLPSEW 252
G W+F+ V +TPA F P+ D+SW D+ VPG WQ+Q G D PIYTN + P+ R PP+ P+ NPTGLYR++ TLP W
Sbjct: 421 GEWRFKTVPAPEKTPANFAKPDLNDKSWHDLTVPGCWQMQGVTGKDDQPIYTNVLMPWFGRTPAIEPPFVPKDNPTGLYRKTFTLPKGW 509
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: UPI0003B56E39 (DUF4981 domain-containing protein n=1 Tax=Ruania albidiflava TaxID=366586 RepID=UPI0003B56E39) HSP 1 Score: 90.9 bits (224), Expect = 1.820e-19 Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = 1
Query: 1 SGTWKFRLVGGVA-----ETPAG-----FETPEFGDRSWEDIDVPGHWQLQDAGASDPPIYTNTVYPFPNRPPYAPRSNPTGLYRRSLTLPSEW 252
SG W+FRL+ GV PAG F P++ D SWE I VP HW L G PIYTN YPFP P+ P NPTG YRRS+T+P++W
Sbjct: 39 SGPWQFRLLPGVPGXXXXXAPAGEAADAFAAPDYDDSSWEAIAVPSHWVLTGEGKYGNPIYTNVQYPFPIDVPHVPDENPTGEYRRSITVPADW 132
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: UPI0008DA056E (DUF4981 domain-containing protein n=1 Tax=Bacteroides ihuae TaxID=1852362 RepID=UPI0008DA056E) HSP 1 Score: 90.5 bits (223), Expect = 2.490e-19 Identity = 44/85 (51.76%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 1 SGTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDAGASDPPIYTNTVYPFPNRPPYAPRS-NPTGLYRRSLTLPSEW 252
+GTWKFR V AE P F E+ W+DI VPG+W+LQ G PIYTN YP P PPY P S NP G Y+RS LP W
Sbjct: 69 NGTWKFRWVKIPAERPVDFYKEEYNTSDWDDIKVPGNWELQGYGI---PIYTNVAYPHPKNPPYIPHSDNPVGSYKRSFDLPQTW 150
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: A0A286EUK2_9ACTN (Beta-galactosidase n=1 Tax=Jatrophihabitans sp. GAS493 TaxID=1907575 RepID=A0A286EUK2_9ACTN) HSP 1 Score: 90.1 bits (222), Expect = 3.390e-19 Identity = 43/84 (51.19%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 1 SGTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDAGASD----PPIYTNTVYPFPNRPPYAPRSNPTGLYRRSLTL 240
+GTW+FR + GFE PEF D +W++I VPGHWQLQ G D P YTN +YPFP PP+ P NPTG YRR+ L
Sbjct: 34 TGTWRFRWSPTADDPSTGFERPEFDDTAWDEIAVPGHWQLQ--GGDDRRYGSPNYTNVLYPFPVEPPFVPDENPTGEYRRTFEL 115
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Match: A0A455SCQ0_9CHLR (Beta-galactosidase n=2 Tax=Thermosporothrix TaxID=768650 RepID=A0A455SCQ0_9CHLR) HSP 1 Score: 89.0 bits (219), Expect = 8.650e-19 Identity = 41/84 (48.81%), Postives = 49/84 (58.33%), Query Frame = 1
Query: 1 SGTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDAGASDPPIYTNTVYPFPNRPPYAPRSNPTGLYRRSLTLPSEW 252
+G WKF PAGF F +W++I VPG WQLQ G P YTN VYPFP PP+ P NPTG YRR+ T+P+ W
Sbjct: 53 NGMWKFHYADAPEHAPAGFFAANFDVAAWDEIAVPGCWQLQGYGR---PHYTNVVYPFPVDPPHVPTENPTGSYRRTFTIPASW 133 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105029.435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig105029.435.1 >prot_F-distichus_contig105029.435.1 ID=prot_F-distichus_contig105029.435.1|Name=mRNA_F-distichus_contig105029.435.1|organism=Fucus distichus monoicous|type=polypeptide|length=84bp SGTWKFRLVGGVAETPAGFETPEFGDRSWEDIDVPGHWQLQDAGASDPPIback to top mRNA from alignment at F-distichus_contig105029:1588..1839+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig105029.435.1 ID=mRNA_F-distichus_contig105029.435.1|Name=mRNA_F-distichus_contig105029.435.1|organism=Fucus distichus monoicous|type=mRNA|length=252bp|location=Sequence derived from alignment at F-distichus_contig105029:1588..1839+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig105029:1588..1839+ >mRNA_F-distichus_contig105029.435.1 ID=mRNA_F-distichus_contig105029.435.1|Name=mRNA_F-distichus_contig105029.435.1|organism=Fucus distichus monoicous|type=CDS|length=504bp|location=Sequence derived from alignment at F-distichus_contig105029:1588..1839+ (Fucus distichus monoicous)back to top |