prot_F-distichus_contig103282.288.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig103282.288.1
Unique Nameprot_F-distichus_contig103282.288.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length92
Homology
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BLAST of mRNA_F-distichus_contig103282.288.1 vs. uniprot
Match: A0A6H5L7F0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F0_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 4.490e-28
Identity = 61/92 (66.30%), Postives = 68/92 (73.91%), Query Frame = 0 
Query:    1 EELQLLLDSSADDFDFLVPNIMDGSSTGLEGAARGPCSRTSSLGDSLPRPGAGCVLETAYSRIWPPSLEKGVWPADYNISDHGSLTTYFRVA 92
            EELQLLLDSS DDFDFLVP I+DGSSTGLEGA +       + GD+      G  LE A SRIWPPSLE+G WP+DY +SDHGSLTT FRVA
Sbjct:  446 EELQLLLDSSDDDFDFLVPTILDGSSTGLEGAQQSGLGGGDASGDAC-----GSTLEPASSRIWPPSLEQGHWPSDYTMSDHGSLTTSFRVA 532
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BLAST of mRNA_F-distichus_contig103282.288.1 vs. uniprot
Match: D7G0H3_ECTSI (Carbon catabolite repressor protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H3_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 4.820e-27
Identity = 59/92 (64.13%), Postives = 66/92 (71.74%), Query Frame = 0 
Query:    1 EELQLLLDSSADDFDFLVPNIMDGSSTGLEGAARGPCSRTSSLGDSLPRPGAGCVLETAYSRIWPPSLEKGVWPADYNISDHGSLTTYFRVA 92
            EELQLLLDSS DDFDFLVP I+DGSSTGLEGA +       + GD+      G  LE   SRIWPPSLE+G WP+DY +SDHGSLT  FRVA
Sbjct:  400 EELQLLLDSSDDDFDFLVPTILDGSSTGLEGAQQSGLGAGGASGDAC-----GSTLEPTSSRIWPPSLEQGHWPSDYTMSDHGSLTASFRVA 486
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig103282.288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7F0_9PHAE4.490e-2866.30Endo/exonuclease/phosphatase domain-containing pro... [more]
D7G0H3_ECTSI4.820e-2764.13Carbon catabolite repressor protein, putative n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig103282contigF-distichus_contig103282:280..1279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig103282.288.1mRNA_F-distichus_contig103282.288.1Fucus distichus monoicousmRNAF-distichus_contig103282 280..1279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig103282.288.1 ID=prot_F-distichus_contig103282.288.1|Name=mRNA_F-distichus_contig103282.288.1|organism=Fucus distichus monoicous|type=polypeptide|length=92bp
EELQLLLDSSADDFDFLVPNIMDGSSTGLEGAARGPCSRTSSLGDSLPRP
GAGCVLETAYSRIWPPSLEKGVWPADYNISDHGSLTTYFRVA
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