mRNA_F-distichus_contig102849.248.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: A0A6H5KC31_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC31_9PHAE) HSP 1 Score: 207 bits (528), Expect = 8.800e-60 Identity = 103/133 (77.44%), Postives = 118/133 (88.72%), Query Frame = 1
Query: 28 VIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLIDAFSQ 426
V+K V+PAVYR+++AEGTFRYDHA LRTHSESVVFCGV AVEGRER+RLG+SFD VV A W +IRRHVPLY+ TQFFDYLG+I+NYAAVGGAILYLSKAEG GEAEI+AL+ARGS+SCLYLIDAFS+
Sbjct: 26 VVKTVVPAVYRKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFDVVVAA------WWELIRRHVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSK 152
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: D7FQX4_ECTSI (ATP-binding cassette, sub-family D, member 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX4_ECTSI) HSP 1 Score: 205 bits (522), Expect = 1.220e-58 Identity = 104/142 (73.24%), Postives = 120/142 (84.51%), Query Frame = 1
Query: 1 IAAKNLARVVIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLIDAFSQ 426
I A + V+K V+PAVY +++AEGTFRYDHA LRTHSESVVFCGV AVEGRER+RLG+SF+ VV A W VIRRHVPLY+ TQFFDYLG+I+NYAAVGGAILYLSKAEG GEAEI+AL+ARGS+SCLYLIDAFS+
Sbjct: 314 IVASAINWAVVKTVVPAVYWKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFNAVVTA------WWEVIRRHVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSK 449
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: A0A836CDC0_9STRA (ABC transporter transmembrane region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC0_9STRA) HSP 1 Score: 148 bits (374), Expect = 9.470e-39 Identity = 78/140 (55.71%), Postives = 96/140 (68.57%), Query Frame = 1
Query: 7 AKNLARVVIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLIDAFSQ 426
A L VV++RV+P VY ER EGTFRY HA LR ++E+V F G A ER RLG F+ V AR W V+ H+PLY QFFDY+G+I+NYAAVG +I YL+KA EAEIS+L+ARGSYSCLY+I+AFS
Sbjct: 328 AGALNAVVLRRVVPRVYEAERREGTFRYAHAWLRANAEAVAFYGAAAAARAERHRLGYYFNSAVDAR------WRVLWAHLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSM 461
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: A0A507FGT3_9FUNG (ABC transporter domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FGT3_9FUNG) HSP 1 Score: 80.5 bits (197), Expect = 6.740e-15 Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 1
Query: 13 NLARVVIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLI 411
++ R+ + V+PAVY +E+ EG +R+ H +RT +E++ EA ER+RL D V+R VLK + VPL Q YL A+++Y + + + A+ K EAEIS ++AR + CLYLI
Sbjct: 272 SICRIAMNPVVPAVYEKEKLEGDYRFYHVHVRTQAEAIAMMHSEA---SERQRLDSLLDAVIRISYTVLK------KTVPLEYAMQLTMYLAAVVSYVVISIPVFDGTFAD-KTEAEISGIVARNLFVCLYLI 394
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: A0A1Y2C5P6_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C5P6_9FUNG) HSP 1 Score: 76.3 bits (186), Expect = 2.010e-13 Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 46 PAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLIDAFS 423
PAVY +E+ EG FR+ H +RT +ES+ F E+ E R RL DV+R ++ VI R+VPL +T+ YL +++ Y V + + + K EAEIS ++A+ + CLYLI F+
Sbjct: 268 PAVYAKEKREGDFRFTHVHVRTEAESIAFMHSESTELR---RLNVLLRDVIRV------SFVVIGRNVPLKFVTEATMYLSSVLTYCVVAIPV-FDGTFDDKTEAEISGIVAKNLFVCLYLIHQFT 383
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: A0A672RZZ3_SINGR (ATP-binding cassette, sub-family D (ALD), member 4 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672RZZ3_SINGR) HSP 1 Score: 71.6 bits (174), Expect = 6.970e-12 Identity = 40/142 (28.17%), Postives = 74/142 (52.11%), Query Frame = 1
Query: 1 IAAKNLARVVIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLIDAFSQ 426
+A + +++I ++ + QE+ EG FR+ H +R +ES FC VE +R R + + ++ + + LY FDYLG+I++Y + I + + +G E+SAL+++ +Y C+YLI+ F+Q
Sbjct: 24 VAGTIINKILIGPIVSMLVEQEKLEGDFRFKHMQIRVSAESAAFCRAGKVEHMRTDR---------RLQMLLSTQRSLMNKELWLYSGVNTFDYLGSILSYIVIAIPI-FAGEYDGLTPGELSALVSKNAYVCIYLINCFTQ 155
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: UPI0010A3F3BC (ATP-binding cassette sub-family D member 4 isoform X2 n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=UPI0010A3F3BC) HSP 1 Score: 71.6 bits (174), Expect = 8.190e-12 Identity = 42/135 (31.11%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 22 RVVIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLIDAFSQ 426
+V++ ++ + QER EG FR+ H +R ++ES F V E ER G F +++ +++++ F LYI FDYLG I++Y + I + + E+SAL++R ++ C+YLI+ F+Q
Sbjct: 243 KVLMGPIVSTLVEQERLEGDFRFKHMQIRVNAESAAFYRAGKV---EHERTGRCFQNLLNTQRSLMNKEFW------LYIGVNTFDYLGGILSYIVIAIPI-FTGVYDELSPGELSALVSRNAFVCIYLINCFTQ 367
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: A0A8C4A9P8_9TELE (ATP binding cassette subfamily D member 4 n=5 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4A9P8_9TELE) HSP 1 Score: 71.6 bits (174), Expect = 8.280e-12 Identity = 42/135 (31.11%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 22 RVVIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLIDAFSQ 426
+V++ ++ + QER EG FR+ H +R ++ES F V E ER G F +++ +++++ F LYI FDYLG I++Y + I + + E+SAL++R ++ C+YLI+ F+Q
Sbjct: 243 KVLMGPIVSTLVEQERLEGDFRFKHMQIRVNAESAAFYRAGKV---EHERTGRCFQNLLNTQRSLMNKEFW------LYIGVNTFDYLGGILSYIVIAIPI-FTGVYDELSPGELSALVSRNAFVCIYLINCFTQ 367
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: A0A3N0XGD7_ANAGA (ATP-binding cassette sub-family D member 4 n=6 Tax=Cyprinoidei TaxID=30727 RepID=A0A3N0XGD7_ANAGA) HSP 1 Score: 70.5 bits (171), Expect = 2.060e-11 Identity = 40/142 (28.17%), Postives = 75/142 (52.82%), Query Frame = 1
Query: 1 IAAKNLARVVIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLIDAFSQ 426
+A + +++I ++ + QE+ EG FR+ H +R ++ES F VE +R R + + ++ + + LYI FDYLG+I++Y + I + K +G E+SAL+++ ++ C+YLI+ F+Q
Sbjct: 193 VAGTIINKILIGPIVSMLVEQEKLEGDFRFKHMQIRVNAESAAFYRAGKVEHMRTDR---------RLQMLLSTQRSLMNKELWLYIGVNTFDYLGSILSYIVIAIPI-FAGKYDGLTPGELSALVSKNAFVCIYLINCFTQ 324
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Match: UPI0010FAABD5 (ATP-binding cassette sub-family D member 4 isoform X3 n=1 Tax=Scleropages formosus TaxID=113540 RepID=UPI0010FAABD5) HSP 1 Score: 70.1 bits (170), Expect = 2.690e-11 Identity = 40/135 (29.63%), Postives = 74/135 (54.81%), Query Frame = 1
Query: 22 RVVIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVEGRERERLGDSFDDVVRARQAVLKTWFVIRRHVPLYILTQFFDYLGAIINYAAVGGAILYLSKAEGKGEAEISALIARGSYSCLYLIDAFSQ 426
++++ ++ ++ QE+ EG FR+ H +R ++ESV F VE +R +++R +++++ F LYI FDY+G ++Y + I + G AE+SALI+R ++ C+YLI+ F+Q
Sbjct: 204 KILMGPIVSTLFDQEKLEGNFRFKHMQIRVNAESVAFYRAGKVEHMRTDR---RLQELLRTQRSLMNKEFW------LYIGVNTFDYVGGFLSYMVIAIPI-FTGVYSGLNPAELSALISRNAFVCIYLINCFTQ 328 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102849.248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig102849.248.1 >prot_F-distichus_contig102849.248.1 ID=prot_F-distichus_contig102849.248.1|Name=mRNA_F-distichus_contig102849.248.1|organism=Fucus distichus monoicous|type=polypeptide|length=142bp IAAKNLARVVIKRVIPAVYRQERAEGTFRYDHACLRTHSESVVFCGVEAVback to top mRNA from alignment at F-distichus_contig102849:841..1862+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig102849.248.1 ID=mRNA_F-distichus_contig102849.248.1|Name=mRNA_F-distichus_contig102849.248.1|organism=Fucus distichus monoicous|type=mRNA|length=1022bp|location=Sequence derived from alignment at F-distichus_contig102849:841..1862+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig102849:841..1862+ >mRNA_F-distichus_contig102849.248.1 ID=mRNA_F-distichus_contig102849.248.1|Name=mRNA_F-distichus_contig102849.248.1|organism=Fucus distichus monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at F-distichus_contig102849:841..1862+ (Fucus distichus monoicous)back to top |