mRNA_F-distichus_contig96590.19118.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: D8LHL7_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL7_ECTSI) HSP 1 Score: 175 bits (443), Expect = 1.540e-53 Identity = 84/113 (74.34%), Postives = 93/113 (82.30%), Query Frame = 1
Query: 1 TMGFKNPFAALKQGIARAGAGAYDEGAVQEAIDQDIKG-NKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERGDGNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
TMGFK+P LKQGIA+ GAG YD+ AV + +D G NKV+VFSW RCPFCKKAKGL+ DLL +P DY+FVELDER DGNAIRYELSQ TGRTSVPQIWI GEFVGGCNDG
Sbjct: 64 TMGFKSPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDG 176
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: A0A835YLP8_9STRA (Selenoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP8_9STRA) HSP 1 Score: 130 bits (326), Expect = 5.780e-36 Identity = 64/108 (59.26%), Postives = 78/108 (72.22%), Query Frame = 1
Query: 16 NPFAALKQGIARAGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERGD-GNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
+PF K+ IA+AG G Y+E V I+ I NKVMVFSW CPFCKKAK L +L+ P+ YK VELD+ + G A R+ELS++TGRTSVPQIWI GEF+GGCNDG
Sbjct: 57 SPFNQFKKFIAKAGTGEYNEAEVAGKINSYIADNKVMVFSWTNCPFCKKAKAQLAELM-EPSQYKVVELDQDAELGKAYRFELSKITGRTSVPQIWIKGEFIGGCNDG 163
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: A0A8J9RIT3_9CHLO (Probable Glutaredoxin at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RIT3_9CHLO) HSP 1 Score: 115 bits (289), Expect = 2.510e-30 Identity = 59/107 (55.14%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 16 NPFAALKQGIARAGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERGDGNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
+P A+K+ IA A AG YDE A+ +D IK N V+VFSW RCPFC KAK L L Y VELD DGNAIR EL++ T RTS+P +WI+GE +GGCNDG
Sbjct: 67 SPANAVKKAIAAAQAGQYDEAAIGGKVDAYIKDNPVVVFSWTRCPFCIKAKRELDSLNAK---YLAVELDTMADGNAIRSELAKRTNRTSMPNVWINGEGIGGCNDG 170
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: A0A383W3I8_TETOB (Glutaredoxin domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W3I8_TETOB) HSP 1 Score: 112 bits (280), Expect = 5.010e-29 Identity = 63/114 (55.26%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 1 TMGFKN-PFAALKQGIARAGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERG-DGNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
T+ KN P K+ +A+A AG YDE AV+ I+ IK NKVMVFSW+ CPFCK AK LL+D+ D+ +ELD G +G IR EL+ MT RTSVP IWI G+ VGGCNDG
Sbjct: 54 TVALKNSPINEGKKALAKAQAGDYDEKAVRGKIEGLIKDNKVMVFSWSGCPFCKNAKALLSDV---GADFTALELDTLGQEGKQIRAELAAMTERTSVPNIWIAGKNVGGCNDG 164
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: A0A2P6TGA2_CHLSO (Glyoxalase domain-containing 4 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TGA2_CHLSO) HSP 1 Score: 106 bits (265), Expect = 6.340e-27 Identity = 51/95 (53.68%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 52 AGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERGDGNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
A AG YDE A + AI++ I N V+VFSW+ CPFCK+AK +L Y +ELD+ DG A+R EL++ TGR+SVP IWI G+ VGGCNDG
Sbjct: 60 AAAGQYDEAATKAAIEKYIADNPVVVFSWSGCPFCKRAKAVLD---ATGAKYTALELDQMADGKALRAELAKKTGRSSVPNIWIAGQNVGGCNDG 151
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: A0A2V0PHJ4_9CHLO (Glutaredoxin domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHJ4_9CHLO) HSP 1 Score: 104 bits (259), Expect = 6.770e-26 Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 13 KNPFAALKQGIARAGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERG-DGNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
++P K+ +A+ AG YDE AV+ ++ + G V++FS++ CPFC +AK LL +L + Y+ +EL+E G DG +R EL+QMT RTS+P IWI G FVGGCNDG
Sbjct: 56 ESPLNKGKKALAKLQAGDYDEAAVRAKLEGILTGTPVVMFSFSTCPFCNRAKALLNELGAS---YEAIELNEMGKDGMQLRAELAQMTDRTSMPSIWIQGSFVGGCNDG 161
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: A0A0M0JS41_9EUKA (Glutaredoxin domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JS41_9EUKA) HSP 1 Score: 107 bits (268), Expect = 8.280e-26 Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 31 LKQGIARAGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERGDGNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
LKQ +A AG YD AV ++ I G+ VM+FS+ CPFCKKAK LLT + +ELDE DG A+R +L + TGRTSVP +WI GE+VGG NDG
Sbjct: 223 LKQWLAERAAGEYDVAAVDARLEAAIAGSSVMLFSFTSCPFCKKAKALLT---AKGAAFSVLELDEDADGAALRAQLGRRTGRTSVPSVWIGGEYVGGMNDG 321
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: A0A061R5D6_9CHLO (Glutaredoxin-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5D6_9CHLO) HSP 1 Score: 102 bits (254), Expect = 8.300e-25 Identity = 51/99 (51.52%), Postives = 71/99 (71.72%), Query Frame = 1
Query: 43 IARAGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERG-DGNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
+A+ AG YD+ AV+ ++ I KV+VFS++ CPFC KAK LL D+ +Y+ VEL++ G +G AIR EL+++TGRTS+P IWI GE +GGCNDG
Sbjct: 95 LAKLQAGDYDKTAVRAKVENXISSEKVVVFSFSTCPFCVKAKELLQDV---GAEYEAVELNDMGKEGYAIRAELAELTGRTSMPNIWIAGEGIGGCNDG 190
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: A0A8J6CFT7_DIALT (Glutaredoxin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFT7_DIALT) HSP 1 Score: 100 bits (250), Expect = 1.610e-24 Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 1
Query: 13 KNPFAALKQGIARAGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERG--DGNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
++P + K G+A+ AG+YDEGA + +D+ I N V +FS+ CPFC KA+ LL ++ YK V+LD+ G A+R L++ TGRTSVP I+I G+FVGGCNDG
Sbjct: 53 ESPVSKFKVGLAKLQAGSYDEGATRARVDELIASNAVTMFSFTTCPFCIKAQQLLDEMGAT---YKVVQLDQNAFTGGYAMRAVLAERTGRTSVPAIFIGGQFVGGCNDG 159
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Match: A0A2P6V558_9CHLO (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V558_9CHLO) HSP 1 Score: 106 bits (264), Expect = 2.050e-24 Identity = 58/113 (51.33%), Postives = 70/113 (61.95%), Query Frame = 1
Query: 1 TMGFKN-PFAALKQGIARAGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFCKKAKGLLTDLLVNPTDYKFVELDERGDGNAIRYELSQMTGRTSVPQIWIDGEFVGGCNDG 336
T+ KN P K +A + AG YD A + IDQ I N +VFSW+ CPFCK AK +L Y +ELD+R DG AIR EL++MTGR+SVP IWI E VGGCNDG
Sbjct: 16 TVAIKNSPLNQGKVALAVSQAGDYDAAATKAMIDQAIADNGCVVFSWSGCPFCKNAKAVLD---ATGAKYVALELDQRPDGKAIRAELAKMTGRSSVPNIWIGKENVGGCNDG 125 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96590.19118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig96590.19118.1 >prot_F-distichus_contig96590.19118.1 ID=prot_F-distichus_contig96590.19118.1|Name=mRNA_F-distichus_contig96590.19118.1|organism=Fucus distichus monoicous|type=polypeptide|length=111bp MGFKNPFAALKQGIARAGAGAYDEGAVQEAIDQDIKGNKVMVFSWARCPFback to top mRNA from alignment at F-distichus_contig96590:819..2143- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig96590.19118.1 ID=mRNA_F-distichus_contig96590.19118.1|Name=mRNA_F-distichus_contig96590.19118.1|organism=Fucus distichus monoicous|type=mRNA|length=1325bp|location=Sequence derived from alignment at F-distichus_contig96590:819..2143- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig96590:819..2143- >mRNA_F-distichus_contig96590.19118.1 ID=mRNA_F-distichus_contig96590.19118.1|Name=mRNA_F-distichus_contig96590.19118.1|organism=Fucus distichus monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at F-distichus_contig96590:819..2143- (Fucus distichus monoicous)back to top |