mRNA_F-distichus_contig10112.87.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI) HSP 1 Score: 248 bits (632), Expect = 5.190e-73 Identity = 119/147 (80.95%), Postives = 133/147 (90.48%), Query Frame = 1
Query: 16 LKRVTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVMEREVAVLADAGCGSRDRPIETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSGLAE 456
LK V ALEKYLEQPHLLDPHLEDMM+VVMGRAKELV+ERE VLA++G GSR RP E FPFQVF CPQL +FCVIYQLCR RG+KAVVRLMPHEAA+LEPVIHAL+AQDT+D+STWETRYGL+LWL+MLSLVPFDIDT+DSGL +
Sbjct: 21 LKAVKGALEKYLEQPHLLDPHLEDMMAVVMGRAKELVVEREEQVLAESGGGSRGRPGEAFPFQVFICPQLHSMFCVIYQLCRVRGAKAVVRLMPHEAADLEPVIHALQAQDTDDYSTWETRYGLLLWLSMLSLVPFDIDTIDSGLRD 167
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: K3WX30_GLOUD (TFCD_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WX30_GLOUD) HSP 1 Score: 145 bits (365), Expect = 4.450e-37 Identity = 72/149 (48.32%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 19 KRVTAALEKYLEQPHLLDPHLEDMMSVVMGRAKE----LVMEREVAVLADAGCGSRDRP-IETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSGL 450
K +TA L++YLEQ HLLDP L +++ +M + K +V+EREV A +D + FPFQV+ P+L LF +IY LC+ RG K +V+L+PHE ++ EP + L++QD DHSTWETRY L+LWL+ML LVPFD++T+DS +
Sbjct: 85 KTITAILDRYLEQSHLLDPFLRELVDPIMVQVKRVIATIVLEREVEA---ARLNEQDPTMVVAFPFQVYKNPKLHKLFQLIYHLCKVRGFKTIVKLLPHEVSDFEPTLMLLQSQDRTDHSTWETRYVLLLWLSMLCLVPFDLNTIDSSI 230
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: G4Z932_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z932_PHYSP) HSP 1 Score: 141 bits (356), Expect = 7.980e-37 Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 1
Query: 25 VTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVMEREVAVLADAGCGSRDRPIETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSG 447
VT+ L+KYLEQ HLLDP L +M+ ++ K ++ ER A D G FP QV+ P+L LF ++Y LC+ RG K VV+L+PHE ++ EP + L++QD DHS WETRY L+LWL+ML LVPFD++T+DS
Sbjct: 54 VTSTLDKYLEQSHLLDPFLHEMLDPIVREIKRVMAERAQAQAQDQAEGV------AFPCQVYRNPRLHKLFQLVYHLCKVRGYKTVVKLLPHEVSDFEPTLQLLQSQDRADHSAWETRYVLLLWLSMLCLVPFDLNTIDSA 188
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: A0A7S2WC38_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WC38_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.130e-36 Identity = 71/144 (49.31%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 16 LKRVTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVMEREVAVLADAGCGSRDRPIETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSG 447
L R A L+KY EQ HL+DP LE+++ +M AK +V RE L +G + +FPFQ++ L +F +Y LC+ RG KAVV+ +PHE AELEP + L+ QD++DHSTWETRY L+LWL+ML L+PFD+DT+DS
Sbjct: 57 LDRFVAILDKYQEQSHLIDPFLEEIVGTLMESAKTVVQLREKDRLEASG------GVSSFPFQIYRNNGLHLVFTALYTLCKVRGYKAVVKQLPHEVAELEPTLLMLQCQDSKDHSTWETRYSLLLWLSMLVLIPFDLDTVDSN 194
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: A0A2R5GKZ4_9STRA (Tubulin-specific chaperone D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GKZ4_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.540e-36 Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 1
Query: 1 ERKRLLKRVTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVMEREVAVLADAGCGSRDRPIETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSGLAERHIG 468
E +R L V LEKY EQ HLLD HLED+++ +M K ++ RE A G D + +FPFQV+ LQ + +Y LC+ RG KAVV+ +PHE A+LEP + L+ QD +D++TWETRY L+LWL+ML L+PFD++T+DS LA G
Sbjct: 60 EAERALDGVQKILEKYQEQAHLLDRHLEDLVTRIMDAVKHVLRLREADEEARPSRGE-DSAVNSFPFQVYRNAGLQLVLKALYLLCKVRGYKAVVKQLPHEVADLEPTLWLLQCQDAKDYTTWETRYSLLLWLSMLVLIPFDLETVDSSLAAGTTG 214
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: A0A7S2WVP9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVP9_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.120e-36 Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 1
Query: 22 RVTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVME---REVAVLADAGCGSRDRPIETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSGL 450
R +EKY EQ LLDPHLE MM+ + GRA ++ R +A D G E FPFQ PQL +F ++YQLCR RG K V + HE ++LEP + L++QD DH +WETRYGL+LWL+ML +VPFDI T+DS +
Sbjct: 66 RFVKIIEKYQEQSTLLDPHLERMMAPLTGRAGAIIRGFHGRHLAQREDGG--------EAFPFQCAREPQLHCIFQIVYQLCRCRGQKCVAKFFSHEVSDLEPTLFMLQSQDRHDHGSWETRYGLLLWLSMLVMVPFDIYTIDSSV 203
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA) HSP 1 Score: 141 bits (356), Expect = 7.210e-36 Identity = 73/148 (49.32%), Postives = 98/148 (66.22%), Query Frame = 1
Query: 4 RKRLLKRVTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVMEREVAVLADAGCGSRDRPIETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSG 447
R R +++V A LEKY+EQ +LLDPHLE +MSV+MGR K ++ E ++G G ++ V QL L +YQLCR RG+K V+RL+PH+AA+LEP + A + QD D +TW +RY L+LWLAML LVPFDI T+DS
Sbjct: 55 RSRYVEQVQAILEKYMEQSNLLDPHLEAIMSVIMGRVKAILASEE-----ESGAGEQEG--------VCRSAQLHALLACVYQLCRVRGAKTVMRLLPHDAADLEPALRAAQRQDRADAATWTSRYALLLWLAMLCLVPFDIATIDSS 189
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: D0NUW3_PHYIT (Tubulin-specific chaperone D, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NUW3_PHYIT) HSP 1 Score: 140 bits (352), Expect = 2.480e-35 Identity = 66/141 (46.81%), Postives = 94/141 (66.67%), Query Frame = 1
Query: 25 VTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVMEREVAVLADAGCGSRDRPIETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSG 447
V+ L++YLEQ HLLDP+L ++++ ++ K ++ ER D FP QV+ P+L LF +IYQLC+ RG K VV+L+PHE ++ EP +H L++QD DHS WETRY L+LWL+ML LVPFD++T+DS
Sbjct: 51 VSQILDRYLEQSHLLDPYLHEIVNPLVTEIKRVMTERTQRAKTDDAVA--------FPCQVYRNPRLHKLFQIIYQLCKVRGYKTVVKLLPHEVSDFEPTLHLLQSQDRTDHSAWETRYVLLLWLSMLCLVPFDLNTIDSS 183
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: A0A6A4EQ60_9STRA (Tubulin-specific chaperone D n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EQ60_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.620e-35 Identity = 68/143 (47.55%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 25 VTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVMEREVAVLADAGCGSRDRPIETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSGLA 453
VT L+KYLEQ HLLDP+L +M+ ++ K ++ E+ A G FP QV+ P+L LF V+Y LC+ RG K VV+L+PHE ++ EP + L++QD DHS WETRY L+LWL+ML LVPFD+ T+DS A
Sbjct: 53 VTNTLDKYLEQSHLLDPYLHEMLDPIVKEIKRVMAEKAQAEADAEGVA--------FPCQVYRNPRLHKLFQVVYHLCKVRGYKTVVKLLPHEVSDFEPTLQLLQSQDRTDHSAWETRYVLLLWLSMLCLVPFDLTTIDSSSA 187
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Match: A0A5D6XM80_9STRA (TFCD_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM80_9STRA) HSP 1 Score: 138 bits (348), Expect = 8.580e-35 Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 1
Query: 25 VTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVMEREVAVLADAGCGSRDRPIETFPFQVFTCPQLQDLFCVIYQLCRARGSKAVVRLMPHEAAELEPVIHALEAQDTEDHSTWETRYGLMLWLAMLSLVPFDIDTMDSGL--AERHIGELVETEADALT 501
+ L++YLEQ HLLDP L ++ +M K V A C FPFQV+ P+L L ++Y LC+ RG K VV+L+PHEA++ EP + L++QD DHSTWETRY L+LWL+ML LVPFD++T+DS + A G + D LT
Sbjct: 64 IATILDRYLEQAHLLDPFLRELTEPIMAHVKRAV------AATGAACEPPAAANVAFPFQVYRNPRLHKLLQLVYHLCKVRGYKTVVKLLPHEASDFEPTLRLLQSQDRSDHSTWETRYVLLLWLSMLCLVPFDLNTIDSSIPGAGAAAGGAIAIVTDTLT 218 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10112.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10112.87.1 >prot_F-distichus_contig10112.87.1 ID=prot_F-distichus_contig10112.87.1|Name=mRNA_F-distichus_contig10112.87.1|organism=Fucus distichus monoicous|type=polypeptide|length=167bp ERKRLLKRVTAALEKYLEQPHLLDPHLEDMMSVVMGRAKELVMEREVAVLback to top mRNA from alignment at F-distichus_contig10112:8179..9070- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10112.87.1 ID=mRNA_F-distichus_contig10112.87.1|Name=mRNA_F-distichus_contig10112.87.1|organism=Fucus distichus monoicous|type=mRNA|length=892bp|location=Sequence derived from alignment at F-distichus_contig10112:8179..9070- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10112:8179..9070- >mRNA_F-distichus_contig10112.87.1 ID=mRNA_F-distichus_contig10112.87.1|Name=mRNA_F-distichus_contig10112.87.1|organism=Fucus distichus monoicous|type=CDS|length=1002bp|location=Sequence derived from alignment at F-distichus_contig10112:8179..9070- (Fucus distichus monoicous)back to top |