mRNA_F-distichus_contig10784.669.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A6H5LEQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEQ8_9PHAE) HSP 1 Score: 274 bits (700), Expect = 1.640e-82 Identity = 148/297 (49.83%), Postives = 202/297 (68.01%), Query Frame = 2
Query: 71 TGQRMHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINITIALET-DSVRTETAALLLTVVAAAVIASFASIVFYDPIYLAAVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIALVCVGVVGLIVYAVRMSMRKHEQLPDRH---RAVDGTSDGSQTRAIFSS 949
TG +LW +N++AY+INAV GG N GW+G VS+ T +TP G+AFSIWG+IF E VFVIWGAF SNR S V+ +GV WF +ACL QAAW I F E LIVSA+LLC+I SL AV+ LS+ + E+ ++PFW V+FPIGLHGGWTLAA+++NI +ALE +E AAL+L++V AA+ A+F S+VF++ YL AV WAIAGI ++++YR +LGK ++DGV L+ LWI L+C+GV+G++V +M+ + E + R A +D T AI+SS
Sbjct: 5 TGSGSRMLWLVNVLAYLINAVVV-GGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLIQAAWSIVFAQELLIVSAILLCLITLSLTLAVISLSLIQCEEGITLFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAFISLVFHNQPYLLAVAWAIAGIASKQDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGILVGVRQMNRAEAEVIHKRRPIPSAPGNPADRDLTSAIYSS 300
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S2V2F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F8_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.290e-28 Identity = 94/259 (36.29%), Postives = 134/259 (51.74%), Query Frame = 2
Query: 62 RSHTGQRMHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFS-IWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFW----TVHFPIGLHGGWTLAASLINITIALETDSVRTETAALLLTVVAAAVIASFASIVFYDPIYLA---AVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIAL 814
R H+ ++ ++L F+N++A+ N V TF G G+ VSN YET+ITPAG+AF IW +IF E FVIW + R + + G+ WF AC+ Q W IAF E ++ SAVLL IA SL A L+ + LS W V P+GLHGGWTLAA L+N+++A+ + + A L+ + IA+ +V ++ A AV W + I + ERLG+ A + AL I L
Sbjct: 10 RGHSSRQYNLLVFVNVVAFCFNVVITFLPS--GVIGKSNEEVSNQYETIITPAGWAFGPIWAIIFILEAAFVIWQCLPTARGNPWI-LGIGFWFAAACILQGCWGIAFAAEKIVASAVLLLGIAASLAFACSELTKLRKSAEAPELS---WGRYVVVWLPLGLHGGWTLAAGLVNVSLAVYVEGASAQ--AQLVVAAVSLGIAAVGGLVASRQMHAAYSLAVAWGLLAIGLNQATTRERLGEDTAQALEYTSVALAIVL 260
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S3UTX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTX0_HETAK) HSP 1 Score: 123 bits (309), Expect = 1.400e-27 Identity = 89/269 (33.09%), Postives = 148/269 (55.02%), Query Frame = 2
Query: 104 NIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINITIALETDSVRTETAALLLTVVAAAVI--ASFASIVFYDPI-YLAAVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIALVCVGVVGLIVYAVR-MSMRKHEQLPDRHR 898
N++A+I+N TFG G +G+ I +S+ Y+T+ITP G+AFSIWG+IFA E VF W F S+ + +LN+ V +++ ACL Q+AW + + +VSA++L IA SL +R++ + QH ++ V F GLHGGWT A+L++ +A + V + L++ +++ AV+ AS +F D + Y A+ WA+ GI + + LG +A+ + ++VC + L+ + +RK + D HR
Sbjct: 21 NVLAFILNCSLTFGNNGFG-YGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNL-ILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNQHETVAE--YFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPK-GQLVVAIISLAVVVAASLYFGMFKDNLSYSLAICWALFGISSEQGQTSMILGPEIANHIRIS------SMVCAVSITLLTCVCEFIRVRKVHKDTDEHR 278
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S2LGL1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL1_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.910e-26 Identity = 88/263 (33.46%), Postives = 144/263 (54.75%), Query Frame = 2
Query: 101 LNIIAYIINAVFTFGGGNLGWFG-EDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWT---VHFPIGLHGGWTLAASLINITIALETDSV--RTETAALLLTVVAAAVIASFASIVFYDPIYLAAVV--WAIAGIVAREEYRIERLGKPVADGVTEGLE-------ALWIALVCVGVVGLIV 844
LN +AY++N + T+G G LG G + + +S+ Y TLITPAG+AFSIW +IF + VF++ F R+ ++ GV W++ C+SQA W IAF E + +S VL+ I SL V L + +Y+ FW + FP +H GW +AA+ +NI++ L ++ V ++ +A +L+V A +A + + P Y+ AVV WA AGI + + + VT+ LE A+ +A++C+ V+ ++
Sbjct: 47 LNAVAYVVNLIVTYGIGVLGIGGLPNNSELSDKYPTLITPAGWAFSIWAIIFISQAVFIVAQCFKKYRAHPLVQDGVGYWYVGTCISQAGWSIAFGYEVIWLSLVLMIAILISL----VGLLVSQYKLK----PGNFWDYVILCFPFAIHCGWIIAATFLNISVLLVSEDVDATSQLSAAILSVAALLSLAVYTLLALSSPEYVVAVVLAWANAGISSELSDPPTEIREHFDSVVTDALENSVTWAYAIILAILCITVITNVI 301
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A835ZBV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV1_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.970e-26 Identity = 95/257 (36.96%), Postives = 127/257 (49.42%), Query Frame = 2
Query: 113 AYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLES------LIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINIT-IALETDSVRTETAALLLTVVAAAVIASFASIVFYDPIYLAAVVWAIAGIVA-REEYRIERLGKPVADGVTEGLEALWIALVCVGVVGLIVYAVRM 859
A+ IN V LG +G I VS + TL TPAGYAFSIW +IFAGE VIW A N + + G+ ++F AC+ QA W I +++ AV C+ ++ A RL + +H L +H PIGLH GW A + NI +A + + A TV A V A + D Y+AAVVWA+A IVA YR + LGK VA+G T + + I L V GLIV+ R+
Sbjct: 6 AFTIN-VAVVSASYLGLWGTTIKDVSGSIPTLTTPAGYAFSIWAVIFAGETALVIWQALPRNAGNPAVKDGLQLYFAGACVLQAIWSILVAQGERRQAMWMLIHAVA-CLGKVNVNLARFRLRDATWVEHLL--------LHVPIGLHAGWAGANLVFNINLVAAQYAGTAAQVRAAFATVCVAGVAAGVFGFMLLDTAYVAAVVWALASIVADNNAYRDKLLGKDVAEGFTGAITTICIVLGAVQ--GLIVFHQRV 250
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S1ZQ04_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZQ04_TRICV) HSP 1 Score: 120 bits (302), Expect = 4.220e-26 Identity = 70/189 (37.04%), Postives = 103/189 (54.50%), Query Frame = 2
Query: 44 NNSRFARSHTGQRMHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITS-VSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINITIALETDSVRT 607
N ++ + +++ L LN++AYIIN V TFG G LGW G +S Y+T+ITPA AFSIW +IF + +FV+ R ++ +GV W+I C++QA W AF E L +S V + +I GSL AV+ ++ E F FW + FP +H GW AAS +N+ + + S T
Sbjct: 46 NTNQVQDAENRPKVNALNVLNLVAYIINIVITFGLGTLGWAGNPTNQELSLKYQTIITPASRAFSIWAVIFIFQAIFVVVQFLPRFRGLPMVQQGVGYWYIGTCVTQAGWTFAFAFEVLSLSLVFMLLIWGSL--AVILYKQYRTESDGTFWE--FWLLRFPFAVHCGWITAASALNVNVLVVDSSAST 230
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S2U694_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U694_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.850e-24 Identity = 65/174 (37.36%), Postives = 91/174 (52.30%), Query Frame = 2
Query: 98 FLNIIAYIINAVFTFGGGNLGWFGEDITS-VSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLS-----------IPFWTVHFPIGLHGGWTLAASLINITIA 583
FLN+ AY +N +FTFG GN GWFG S +S Y+T+ITP G AFSIWGLIF + +F + R + ++ GVS W+ C++Q W AF E + +S + I SL + Y Q++L +S FW FP +HGGW AA +N+ +A
Sbjct: 41 FLNVFAYGVNVLFTFGIGNAGWFGNGTNSELSEKYQTIITPRGTAFSIWGLIFMFQAIFCVVQLLPRYRGTRMVQNGVSYWWTAVCVTQVGWTFAFAYEVIPLSLFFMLCIWVSLMGLL-------YSQYYLEVSDIQNGSLLSWLAEFWLFQFPFCIHGGWITAALALNMNVA 207
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S2MNG6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MNG6_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.010e-23 Identity = 77/284 (27.11%), Postives = 136/284 (47.89%), Query Frame = 2
Query: 80 RMHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINITIALETDSVRTETAALLLTVVAAAVIASFASIVFY----DPIYLAAVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIALVCVGVVGLIVYAVRMSMRKHEQLPDRHRAVDGTSD 919
++HV +LN + Y++N V TF G GE+ ++S Y+T+ITPAG+AFSIWGLIF + +FV+ +R ++ +GV W+ C+ Q AW AF+ E L +S + + +I +L + S + + FW + FP +H GW + A +N+ + + + ++ T V A + S ++F D + WA I I+++ G ++A+ C V G+I++ ++ K + +R+ +GT D
Sbjct: 8 KLHVTNYLNAVGYVLNFVITFAGVG----GENNATISAKYQTIITPAGWAFSIWGLIFTMQAIFVVLQLLPDHRRLPLVKEGVGYWYFGTCIFQVAWTCAFSYEVLWLSVLFMALILLTLIAIIKNQSKIPPDG----TNQDFWLLRFPFSIHCGWIMVAFAVNVNVLVVASNAKSRTQVEWAIVSLAYIAFSSIYVLFCKRTTDTTMALVIAWAALAIAIELTDPIDKIDDTFGGGTITTIQAI-----CATVCGVILFT---AIIKVILMCCAYRSAEGTED 275
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S1YFE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YFE7_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.020e-23 Identity = 67/166 (40.36%), Postives = 92/166 (55.42%), Query Frame = 2
Query: 98 FLNIIAYIINAVFTFGGGNLGWFGE-DITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFL----FLSIPFWTVHFPIGLHGGWTLAASLINITI 580
+LN+I YI+N V TFG G LGW G D +S Y+TL+TP G AFSIWG+IF + +FV+ R+ ++ GV W+I C QAAW AF E +I A++ I A+V Y Q++L LS FW + FP +H GW AAS +N+ +
Sbjct: 23 YLNVIFYILNTVITFGIGTLGWTGTPDNGELSEKYQTLVTPKGTAFSIWGIIFIFQAIFVVVQLLPRFRAKAMVQDGVGYWYIATCAFQAAWTFAFAYE-IIWLALIFIIXXXXXXVAIV------YYQYYLPSEGTLS-EFWLLRFPFMIHCGWLTAASTLNVNV 180
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A835YY35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY35_9STRA) HSP 1 Score: 110 bits (274), Expect = 6.390e-23 Identity = 86/248 (34.68%), Postives = 129/248 (52.02%), Query Frame = 2
Query: 101 LNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAF-GSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLS-IPFWTVHFPIGLHGGWTLAASLINITIALETDSVRTETAALLLTVVAAAVIASFASIVFY-----DPIYLAAVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIALVCV 823
+N +A+++N V G ++G G VS+T+ TLITPA +AF IWG I++GE +V+W G+ R+ V G WF +AC QA W +A+ E+L+ S +L +++ L+ + L + + I F + HF I LH GW LAA+L+N+ +AL AAL L AA+++A A+ Y D + AA+ WA+ G A R RL A G+ L A +AL V
Sbjct: 31 INALAFVLN-VAVVGASSVGLLGRTQKGVSDTFTTLITPAAFAFGIWGPIYSGESAWVVWALQKGNERARSVAAVGP--WFSIACALQAVWSVAWAQEALLTSTAILSVVSACLWASAAGLRRARAAGDAPPPNGIEFRSSHFTIALHAGWVLAATLVNVNMALVGAGAM---AALQLWAAAASLLALGAAGTAYGVKRRDLGFGAAIAWALLGAAANPGARNGRLSVGAARGLQGVLTAGGVALAAV 272 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10784.669.1 >prot_F-distichus_contig10784.669.1 ID=prot_F-distichus_contig10784.669.1|Name=mRNA_F-distichus_contig10784.669.1|organism=Fucus distichus monoicous|type=polypeptide|length=290bp MHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFback to top mRNA from alignment at F-distichus_contig10784:5859..9293- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10784.669.1 ID=mRNA_F-distichus_contig10784.669.1|Name=mRNA_F-distichus_contig10784.669.1|organism=Fucus distichus monoicous|type=mRNA|length=3435bp|location=Sequence derived from alignment at F-distichus_contig10784:5859..9293- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10784:5859..9293- >mRNA_F-distichus_contig10784.669.1 ID=mRNA_F-distichus_contig10784.669.1|Name=mRNA_F-distichus_contig10784.669.1|organism=Fucus distichus monoicous|type=CDS|length=1740bp|location=Sequence derived from alignment at F-distichus_contig10784:5859..9293- (Fucus distichus monoicous)back to top |