mRNA_F-distichus_contig10784.669.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10784.669.1
Unique NamemRNA_F-distichus_contig10784.669.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A6H5LEQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEQ8_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 1.640e-82
Identity = 148/297 (49.83%), Postives = 202/297 (68.01%), Query Frame = 2
Query:   71 TGQRMHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINITIALET-DSVRTETAALLLTVVAAAVIASFASIVFYDPIYLAAVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIALVCVGVVGLIVYAVRMSMRKHEQLPDRH---RAVDGTSDGSQTRAIFSS 949
            TG    +LW +N++AY+INAV   GG N GW+G     VS+   T +TP G+AFSIWG+IF  E VFVIWGAF SNR S V+ +GV  WF +ACL QAAW I F  E LIVSA+LLC+I  SL  AV+ LS+ + E+     ++PFW V+FPIGLHGGWTLAA+++NI +ALE      +E AAL+L++V AA+ A+F S+VF++  YL AV WAIAGI ++++YR  +LGK ++DGV   L+ LWI L+C+GV+G++V   +M+  + E +  R     A    +D   T AI+SS
Sbjct:    5 TGSGSRMLWLVNVLAYLINAVVV-GGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLIQAAWSIVFAQELLIVSAILLCLITLSLTLAVISLSLIQCEEGITLFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAFISLVFHNQPYLLAVAWAIAGIASKQDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGILVGVRQMNRAEAEVIHKRRPIPSAPGNPADRDLTSAIYSS 300          
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S2V2F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F8_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.290e-28
Identity = 94/259 (36.29%), Postives = 134/259 (51.74%), Query Frame = 2
Query:   62 RSHTGQRMHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFS-IWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFW----TVHFPIGLHGGWTLAASLINITIALETDSVRTETAALLLTVVAAAVIASFASIVFYDPIYLA---AVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIAL 814
            R H+ ++ ++L F+N++A+  N V TF     G  G+    VSN YET+ITPAG+AF  IW +IF  E  FVIW    + R +  +  G+  WF  AC+ Q  W IAF  E ++ SAVLL  IA SL  A   L+  +       LS   W     V  P+GLHGGWTLAA L+N+++A+  +    +  A L+    +  IA+   +V    ++ A   AV W +  I   +    ERLG+  A  +     AL I L
Sbjct:   10 RGHSSRQYNLLVFVNVVAFCFNVVITFLPS--GVIGKSNEEVSNQYETIITPAGWAFGPIWAIIFILEAAFVIWQCLPTARGNPWI-LGIGFWFAAACILQGCWGIAFAAEKIVASAVLLLGIAASLAFACSELTKLRKSAEAPELS---WGRYVVVWLPLGLHGGWTLAAGLVNVSLAVYVEGASAQ--AQLVVAAVSLGIAAVGGLVASRQMHAAYSLAVAWGLLAIGLNQATTRERLGEDTAQALEYTSVALAIVL 260          
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S3UTX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTX0_HETAK)

HSP 1 Score: 123 bits (309), Expect = 1.400e-27
Identity = 89/269 (33.09%), Postives = 148/269 (55.02%), Query Frame = 2
Query:  104 NIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINITIALETDSVRTETAALLLTVVAAAVI--ASFASIVFYDPI-YLAAVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIALVCVGVVGLIVYAVR-MSMRKHEQLPDRHR 898
            N++A+I+N   TFG    G +G+ I  +S+ Y+T+ITP G+AFSIWG+IFA E VF  W  F S+ +  +LN+ V  +++ ACL Q+AW +    +  +VSA++L  IA SL    +R++  +  QH       ++ V F  GLHGGWT  A+L++  +A   + V  +   L++ +++ AV+  AS    +F D + Y  A+ WA+ GI + +      LG  +A+ +         ++VC   + L+      + +RK  +  D HR
Sbjct:   21 NVLAFILNCSLTFGNNGFG-YGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQLFQSSDNL-ILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNQHETVAE--YFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPK-GQLVVAIISLAVVVAASLYFGMFKDNLSYSLAICWALFGISSEQGQTSMILGPEIANHIRIS------SMVCAVSITLLTCVCEFIRVRKVHKDTDEHR 278          
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S2LGL1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL1_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.910e-26
Identity = 88/263 (33.46%), Postives = 144/263 (54.75%), Query Frame = 2
Query:  101 LNIIAYIINAVFTFGGGNLGWFG-EDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWT---VHFPIGLHGGWTLAASLINITIALETDSV--RTETAALLLTVVAAAVIASFASIVFYDPIYLAAVV--WAIAGIVAREEYRIERLGKPVADGVTEGLE-------ALWIALVCVGVVGLIV 844
            LN +AY++N + T+G G LG  G  + + +S+ Y TLITPAG+AFSIW +IF  + VF++   F   R+  ++  GV  W++  C+SQA W IAF  E + +S VL+  I  SL    V L + +Y+         FW    + FP  +H GW +AA+ +NI++ L ++ V   ++ +A +L+V A   +A +  +    P Y+ AVV  WA AGI +        + +     VT+ LE       A+ +A++C+ V+  ++
Sbjct:   47 LNAVAYVVNLIVTYGIGVLGIGGLPNNSELSDKYPTLITPAGWAFSIWAIIFISQAVFIVAQCFKKYRAHPLVQDGVGYWYVGTCISQAGWSIAFGYEVIWLSLVLMIAILISL----VGLLVSQYKLK----PGNFWDYVILCFPFAIHCGWIIAATFLNISVLLVSEDVDATSQLSAAILSVAALLSLAVYTLLALSSPEYVVAVVLAWANAGISSELSDPPTEIREHFDSVVTDALENSVTWAYAIILAILCITVITNVI 301          
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A835ZBV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV1_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.970e-26
Identity = 95/257 (36.96%), Postives = 127/257 (49.42%), Query Frame = 2
Query:  113 AYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLES------LIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINIT-IALETDSVRTETAALLLTVVAAAVIASFASIVFYDPIYLAAVVWAIAGIVA-REEYRIERLGKPVADGVTEGLEALWIALVCVGVVGLIVYAVRM 859
            A+ IN V       LG +G  I  VS +  TL TPAGYAFSIW +IFAGE   VIW A   N  +  +  G+ ++F  AC+ QA W I            +++ AV  C+   ++  A  RL    + +H L        +H PIGLH GW  A  + NI  +A +      +  A   TV  A V A     +  D  Y+AAVVWA+A IVA    YR + LGK VA+G T  +  + I L  V   GLIV+  R+
Sbjct:    6 AFTIN-VAVVSASYLGLWGTTIKDVSGSIPTLTTPAGYAFSIWAVIFAGETALVIWQALPRNAGNPAVKDGLQLYFAGACVLQAIWSILVAQGERRQAMWMLIHAVA-CLGKVNVNLARFRLRDATWVEHLL--------LHVPIGLHAGWAGANLVFNINLVAAQYAGTAAQVRAAFATVCVAGVAAGVFGFMLLDTAYVAAVVWALASIVADNNAYRDKLLGKDVAEGFTGAITTICIVLGAVQ--GLIVFHQRV 250          
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S1ZQ04_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZQ04_TRICV)

HSP 1 Score: 120 bits (302), Expect = 4.220e-26
Identity = 70/189 (37.04%), Postives = 103/189 (54.50%), Query Frame = 2
Query:   44 NNSRFARSHTGQRMHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITS-VSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINITIALETDSVRT 607
            N ++   +    +++ L  LN++AYIIN V TFG G LGW G      +S  Y+T+ITPA  AFSIW +IF  + +FV+       R   ++ +GV  W+I  C++QA W  AF  E L +S V + +I GSL  AV+    ++ E    F    FW + FP  +H GW  AAS +N+ + +   S  T
Sbjct:   46 NTNQVQDAENRPKVNALNVLNLVAYIINIVITFGLGTLGWAGNPTNQELSLKYQTIITPASRAFSIWAVIFIFQAIFVVVQFLPRFRGLPMVQQGVGYWYIGTCVTQAGWTFAFAFEVLSLSLVFMLLIWGSL--AVILYKQYRTESDGTFWE--FWLLRFPFAVHCGWITAASALNVNVLVVDSSAST 230          
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S2U694_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U694_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.850e-24
Identity = 65/174 (37.36%), Postives = 91/174 (52.30%), Query Frame = 2
Query:   98 FLNIIAYIINAVFTFGGGNLGWFGEDITS-VSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLS-----------IPFWTVHFPIGLHGGWTLAASLINITIA 583
            FLN+ AY +N +FTFG GN GWFG    S +S  Y+T+ITP G AFSIWGLIF  + +F +       R + ++  GVS W+   C++Q  W  AF  E + +S   +  I  SL   +       Y Q++L +S             FW   FP  +HGGW  AA  +N+ +A
Sbjct:   41 FLNVFAYGVNVLFTFGIGNAGWFGNGTNSELSEKYQTIITPRGTAFSIWGLIFMFQAIFCVVQLLPRYRGTRMVQNGVSYWWTAVCVTQVGWTFAFAYEVIPLSLFFMLCIWVSLMGLL-------YSQYYLEVSDIQNGSLLSWLAEFWLFQFPFCIHGGWITAALALNMNVA 207          
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S2MNG6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MNG6_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.010e-23
Identity = 77/284 (27.11%), Postives = 136/284 (47.89%), Query Frame = 2
Query:   80 RMHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIGLHGGWTLAASLINITIALETDSVRTETAALLLTVVAAAVIASFASIVFY----DPIYLAAVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIALVCVGVVGLIVYAVRMSMRKHEQLPDRHRAVDGTSD 919
            ++HV  +LN + Y++N V TF G      GE+  ++S  Y+T+ITPAG+AFSIWGLIF  + +FV+      +R   ++ +GV  W+   C+ Q AW  AF+ E L +S + + +I  +L   +   S    +      +  FW + FP  +H GW + A  +N+ + +   + ++ T      V  A +  S   ++F     D      + WA   I       I+++      G    ++A+     C  V G+I++    ++ K   +   +R+ +GT D
Sbjct:    8 KLHVTNYLNAVGYVLNFVITFAGVG----GENNATISAKYQTIITPAGWAFSIWGLIFTMQAIFVVLQLLPDHRRLPLVKEGVGYWYFGTCIFQVAWTCAFSYEVLWLSVLFMALILLTLIAIIKNQSKIPPDG----TNQDFWLLRFPFSIHCGWIMVAFAVNVNVLVVASNAKSRTQVEWAIVSLAYIAFSSIYVLFCKRTTDTTMALVIAWAALAIAIELTDPIDKIDDTFGGGTITTIQAI-----CATVCGVILFT---AIIKVILMCCAYRSAEGTED 275          
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A7S1YFE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YFE7_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.020e-23
Identity = 67/166 (40.36%), Postives = 92/166 (55.42%), Query Frame = 2
Query:   98 FLNIIAYIINAVFTFGGGNLGWFGE-DITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFL----FLSIPFWTVHFPIGLHGGWTLAASLINITI 580
            +LN+I YI+N V TFG G LGW G  D   +S  Y+TL+TP G AFSIWG+IF  + +FV+       R+  ++  GV  W+I  C  QAAW  AF  E +I  A++  I       A+V      Y Q++L     LS  FW + FP  +H GW  AAS +N+ +
Sbjct:   23 YLNVIFYILNTVITFGIGTLGWTGTPDNGELSEKYQTLVTPKGTAFSIWGIIFIFQAIFVVVQLLPRFRAKAMVQDGVGYWYIATCAFQAAWTFAFAYE-IIWLALIFIIXXXXXXVAIV------YYQYYLPSEGTLS-EFWLLRFPFMIHCGWLTAASTLNVNV 180          
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Match: A0A835YY35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY35_9STRA)

HSP 1 Score: 110 bits (274), Expect = 6.390e-23
Identity = 86/248 (34.68%), Postives = 129/248 (52.02%), Query Frame = 2
Query:  101 LNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAFSIWGLIFAGELVFVIWGAF-GSNRSSDVLNKGVSIWFIVACLSQAAWIIAFTLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLS-IPFWTVHFPIGLHGGWTLAASLINITIALETDSVRTETAALLLTVVAAAVIASFASIVFY-----DPIYLAAVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIALVCV 823
            +N +A+++N V   G  ++G  G     VS+T+ TLITPA +AF IWG I++GE  +V+W    G+ R+  V   G   WF +AC  QA W +A+  E+L+ S  +L +++  L+ +   L   +        + I F + HF I LH GW LAA+L+N+ +AL         AAL L   AA+++A  A+   Y     D  + AA+ WA+ G  A    R  RL    A G+   L A  +AL  V
Sbjct:   31 INALAFVLN-VAVVGASSVGLLGRTQKGVSDTFTTLITPAAFAFGIWGPIYSGESAWVVWALQKGNERARSVAAVGP--WFSIACALQAVWSVAWAQEALLTSTAILSVVSACLWASAAGLRRARAAGDAPPPNGIEFRSSHFTIALHAGWVLAATLVNVNMALVGAGAM---AALQLWAAAASLLALGAAGTAYGVKRRDLGFGAAIAWALLGAAANPGARNGRLSVGAARGLQGVLTAGGVALAAV 272          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10784.669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LEQ8_9PHAE1.640e-8249.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V2F8_9STRA1.290e-2836.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UTX0_HETAK1.400e-2733.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2LGL1_9STRA1.910e-2633.46Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A835ZBV1_9STRA2.970e-2636.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1ZQ04_TRICV4.220e-2637.04Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2U694_9STRA2.850e-2437.36Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2MNG6_9STRA1.010e-2327.11Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1YFE7_9STRA1.020e-2340.36Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A835YY35_9STRA6.390e-2334.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10784contigF-distichus_contig10784:5859..9293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score100.1
Seed ortholog evalue1.7e-18
Seed eggNOG ortholog880070.Cycma_4663
Preferred namemgtA
KEGG koko:K01531
KEGG TC3.A.3.4
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0099131,GO:0099132
EggNOG free text desc.ATPase, P-type transporting, HAD superfamily, subfamily IC
EggNOG OGs47PFF@768503,4NHBI@976,COG0474@1,COG0474@2
EC3.6.3.2
COG Functional cat.P
BiGG ReactioniSF_1195.SF4248
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons4
Model size2265
Cds size870
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10784.669.1prot_F-distichus_contig10784.669.1Fucus distichus monoicouspolypeptideF-distichus_contig10784 7172..9211 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929012.4846427-UTR-F-distichus_contig10784:5858..71711622929012.4846427-UTR-F-distichus_contig10784:5858..7171Fucus distichus monoicousUTRF-distichus_contig10784 5859..7171 -
1690885105.3504875-UTR-F-distichus_contig10784:5858..71711690885105.3504875-UTR-F-distichus_contig10784:5858..7171Fucus distichus monoicousUTRF-distichus_contig10784 5859..7171 -
1622929012.5546257-UTR-F-distichus_contig10784:9211..92931622929012.5546257-UTR-F-distichus_contig10784:9211..9293Fucus distichus monoicousUTRF-distichus_contig10784 9212..9293 -
1690885105.3991418-UTR-F-distichus_contig10784:9211..92931690885105.3991418-UTR-F-distichus_contig10784:9211..9293Fucus distichus monoicousUTRF-distichus_contig10784 9212..9293 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929012.4976754-CDS-F-distichus_contig10784:7171..75661622929012.4976754-CDS-F-distichus_contig10784:7171..7566Fucus distichus monoicousCDSF-distichus_contig10784 7172..7566 -
1690885105.364433-CDS-F-distichus_contig10784:7171..75661690885105.364433-CDS-F-distichus_contig10784:7171..7566Fucus distichus monoicousCDSF-distichus_contig10784 7172..7566 -
1622929012.5175498-CDS-F-distichus_contig10784:7882..80781622929012.5175498-CDS-F-distichus_contig10784:7882..8078Fucus distichus monoicousCDSF-distichus_contig10784 7883..8078 -
1690885105.3731132-CDS-F-distichus_contig10784:7882..80781690885105.3731132-CDS-F-distichus_contig10784:7882..8078Fucus distichus monoicousCDSF-distichus_contig10784 7883..8078 -
1622929012.531185-CDS-F-distichus_contig10784:8608..87471622929012.531185-CDS-F-distichus_contig10784:8608..8747Fucus distichus monoicousCDSF-distichus_contig10784 8609..8747 -
1690885105.3815472-CDS-F-distichus_contig10784:8608..87471690885105.3815472-CDS-F-distichus_contig10784:8608..8747Fucus distichus monoicousCDSF-distichus_contig10784 8609..8747 -
1622929012.5441873-CDS-F-distichus_contig10784:9071..92111622929012.5441873-CDS-F-distichus_contig10784:9071..9211Fucus distichus monoicousCDSF-distichus_contig10784 9072..9211 -
1690885105.3900614-CDS-F-distichus_contig10784:9071..92111690885105.3900614-CDS-F-distichus_contig10784:9071..9211Fucus distichus monoicousCDSF-distichus_contig10784 9072..9211 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10784.669.1

>prot_F-distichus_contig10784.669.1 ID=prot_F-distichus_contig10784.669.1|Name=mRNA_F-distichus_contig10784.669.1|organism=Fucus distichus monoicous|type=polypeptide|length=290bp
MHVLWFLNIIAYIINAVFTFGGGNLGWFGEDITSVSNTYETLITPAGYAF
SIWGLIFAGELVFVIWGAFGSNRSSDVLNKGVSIWFIVACLSQAAWIIAF
TLESLIVSAVLLCIIAGSLFTAVVRLSIFKYEQHFLFLSIPFWTVHFPIG
LHGGWTLAASLINITIALETDSVRTETAALLLTVVAAAVIASFASIVFYD
PIYLAAVVWAIAGIVAREEYRIERLGKPVADGVTEGLEALWIALVCVGVV
GLIVYAVRMSMRKHEQLPDRHRAVDGTSDGSQTRAIFSS*
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mRNA from alignment at F-distichus_contig10784:5859..9293-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10784.669.1 ID=mRNA_F-distichus_contig10784.669.1|Name=mRNA_F-distichus_contig10784.669.1|organism=Fucus distichus monoicous|type=mRNA|length=3435bp|location=Sequence derived from alignment at F-distichus_contig10784:5859..9293- (Fucus distichus monoicous)
AGTTTCGCCTCGATCCAGGGTCGCAGATCGGCGCGGGTACCTCAACAACT CCAGGTTTGCGCGATCTCACACCGGCCAAAGAATGCACGTGCTCTGGTTT TTAAATATCATCGCGTACATCATCAACGCCGTCTTCACCTTTGGGGGCGG CAATCTTGGATGGTTCGGAGAAGATATCACCTCCGTCTCCAATACGTACG AGACTCTCATCACGCCCGCCGGGTGAGTTTGAGCGACTATGCTTGCCTCT CCCGCGGCTCACTCCGTCCAACTTTGCTGCTTTCGTCTCGCAGGAAAATC CGGCTGGTATAACTGCAGGTCGTCGAATTATGCTGACTTGCGCACACGAT GAGCGGCCCCACGTCGGACGGCGCGAATTCTGGTCTAGCTCGAAACAGCA TCACGCGACTTTGGTTATAGTTATAGCACTATGTTTATAGCTCTTTTTAA GAGCGCGATTTCACACTGCTGTGCTGTTACCACGGTGACAAAACATTTTG CCCCGATCTCTTCGCTCGCCCGAATGCTCCTGTCTCGATAATCCAGCTAC GCGTTTTCTATCTGGGGGCTGATCTTCGCGGGAGAGCTCGTTTTTGTGAT ATGGGGAGCATTCGGGTCGAACCGCTCTAGTGACGTCCTCAACAAGGGAG TCAGCATCTGGTTCATTGTTGCCTGTCTCAGCCAGGTAGGTCCGCACTAT TATCCGTACACAGATTTATTTTTGACGCAGGGAAAAGATCCTGAAATACG TTGAAAGTTTTCAAACATTGCCGGAGGCGGCGACGTGAACTGATTTGTTG TTATATTGGGCGGACCCTCAAATGTAAACATCCGATGGGATAGGTCGCGT CGTTCGGCGTGTCGCCTGATACTCAGCGTGCACTTTCTTGTACGACTCGA AACAGAGAGAGAACGCAGTTCCATAATCTGCCGTGGGTGCGCTCGGTGTC TCGGAGTCGGCGATCGGCCGCGTATTTCTATTTCCATTATCAATCATGGC GACTGTTGTGACTCCTTTGCGTCCGAGCCCAAATCGCAGAATAACGTTTT AACGAAAACTTCGCAGTTACATTGCTTCAGCAGCGATCGTCCCCCACGCT GAAAATATCTATTGATAGCTCGAGAGACGCACTCATGGCGTTGTTTGTAT TTTAACTTTATGACTGCTCCTTTCGTTATCCGACCTCACATGTATCGACC GTGCTCGTGACACAGGCGGCCTGGATCATCGCATTCACGCTGGAGAGCCT GATCGTCAGCGCCGTTTTGCTCTGCATAATCGCGGGATCGCTCTTTACGG CAGTTGTGAGACTGAGCATCTTCAAGTACGAACAGCATTTTCTGTTCTTG TCCATTCCCTTCTGGACCGTGCATTTCCCCATCGGCCTGCACGGGGGATG GACCCTTGCCGGTAAGTCCCTGTGTGCAGTGCTCGACCGAAGAGAGGAAA GCTCCCCTGACTTGCCGTTGAACTTGTATTTGACTTTTGGCGCGCGCGTG TTCACACTCCAATATCGTAGCCTATATCCCGGCCTCGCGACCTGACAACG GAGGTCTTCGGATTGTTTCACGTAATCGTCTGCAAACGATTAGATCTGAC GTTTCCGCCGACGAAACACATAACGACTGTCGATTGCCCGCGGGTCGTCA AAAACGAGTCCAGTCTTGCGCTCGCCGTTGACACTTTCCCTCCTATCCTC TCTCTTGCTGAACTCGAACGTCTGCAGCATCGCTCATAAACATCACCATC GCGCTGGAAACAGACAGCGTCAGAACCGAGACGGCGGCTCTCCTTCTGAC CGTTGTCGCCGCTGCGGTGATAGCTTCCTTCGCTTCGATCGTCTTCTATG ACCCCATCTACCTCGCCGCAGTCGTGTGGGCTATTGCTGGCATCGTCGCA AGGGAGGAATACCGTATTGAGAGGCTGGGGAAGCCCGTGGCGGACGGAGT TACCGAGGGTCTTGAAGCACTTTGGATAGCGCTTGTGTGCGTCGGGGTGG TCGGACTTATCGTCTACGCGGTGAGGATGAGCATGAGGAAGCACGAGCAA CTGCCCGACAGGCACAGAGCGGTCGATGGTACCAGTGACGGCAGCCAAAC CCGCGCCATATTTTCGTCTTAGCGAAACGAAACGAATCGCGCAGAGACTA TGATGTGTACATTGTTCGCTCCCTATCGTAGGAAGCCGCAGGAGAGTAGT AGCGTACGTTCTGGAGCGTGGGCTACGTGACCGACTGAGTTTGCAGTTGT ACTTCGCGCCCTACGCTCGGTTCTGGTCGTTGATGTGTGCCGCTAAGAAG GGAAAGATAAATAAAACATCAGGCGCGCAATACGTTTCGTTCATCGTTCC ACATGCGCTCGTCATGATCTCTATTTTATTTCTGCCGTCCGATTTCCGGG GCAACAGAGGCAAGGTTGGTGATTGGTGGGACTAGTGACTACGGGTCGGA AGGGTGTCATATGGGTAACGGCAATGGGGTTTTTGTCACGTGAAGGCACG CAAGAGGGGCTGTCGCATGGCGCCTATCTCTACCGTATCTTGTTGGGATA TCCGTGGTTCTATCGATCTCCCTGTACTGTAGAGACTTACCGGTTTAGTA TTGGTAGTATTTAGGCGGCGCGGGCAGGGCTCTAGCGATTTGGTGCTGTC ACATGGTGATTCACCAGCTACAGGCAGTGTATGTATTTTGTGACCTGAGA AATGGCGACGAGTTCTCATATATCTGGTACAATACAGAGTAAATACGGTA CCAAGAAGGAATTGGAAGATGACGACGGAGTGCGGTGGAGTACGCTGTGT ACAAAGTTTGGTACCGTTCGTTCGAACACTGGAGGAGGGACCACATCAAC GATTCGATTAGTATTGGTATCAATATTAATAGAGTTGTGCATTTTGTACC CCTTCAGAAACACACCGGTTTCGTGATACGGACTCGGCCATTCTTGTCGA TGAAGGACATGCTGTTATAGCCCCTACCCCCTTATGGACGAGGCGAGACC TCGTCGCAGGCTTTTTTGTTGTAGTTGTCGTTTTCCTCGGATCATTCCAC GCTCGGTCCGAATAGCGTAAGATACATGCATGTAGATATCCTGTGCCGGG GTACGAGGTACTCGCGAAGACGGCTACGGCGATAGGAATGTCGAAATAGA TGCGTGGGTAAAAGTCGATCGTCTGTTGTTACGAAGCCTGCTGCAGTGGC TCTTGCGTTGAAGCATGATACCGGGTACATACACTATTGATAGGGCAGGG GATGGACGAATGATGAGTGATTGTTTTGTACTGCCTGTCAGTTATATCCA AGAACGGTCTGTTTGGCACTCTTAGATATATACCGCAGGGCAAATGTAAC ATGGACCACGCACTCGTCCCTGGTTTAAATACTTGTATGCCGTCGTTCTC TAAATGGTAAGCCGTCCGATTTCCGGACTAGTAGG
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Coding sequence (CDS) from alignment at F-distichus_contig10784:5859..9293-

>mRNA_F-distichus_contig10784.669.1 ID=mRNA_F-distichus_contig10784.669.1|Name=mRNA_F-distichus_contig10784.669.1|organism=Fucus distichus monoicous|type=CDS|length=1740bp|location=Sequence derived from alignment at F-distichus_contig10784:5859..9293- (Fucus distichus monoicous)
ATGCACGTGCTCTGGTTTTTAAATATCATCGCGTACATCATCAACGCCGT
CTTCACCTTTGGGGGCGGCAATCTTGGATGGTTCGGAGAAGATATCACCT
CCGTCTCCAATACGTACGAGACTCTCATCACGCCCGCCGGATGCACGTGC
TCTGGTTTTTAAATATCATCGCGTACATCATCAACGCCGTCTTCACCTTT
GGGGGCGGCAATCTTGGATGGTTCGGAGAAGATATCACCTCCGTCTCCAA
TACGTACGAGACTCTCATCACGCCCGCCGGCTACGCGTTTTCTATCTGGG
GGCTGATCTTCGCGGGAGAGCTCGTTTTTGTGATATGGGGAGCATTCGGG
TCGAACCGCTCTAGTGACGTCCTCAACAAGGGAGTCAGCATCTGGTTCAT
TGTTGCCTGTCTCAGCCAGCTACGCGTTTTCTATCTGGGGGCTGATCTTC
GCGGGAGAGCTCGTTTTTGTGATATGGGGAGCATTCGGGTCGAACCGCTC
TAGTGACGTCCTCAACAAGGGAGTCAGCATCTGGTTCATTGTTGCCTGTC
TCAGCCAGGCGGCCTGGATCATCGCATTCACGCTGGAGAGCCTGATCGTC
AGCGCCGTTTTGCTCTGCATAATCGCGGGATCGCTCTTTACGGCAGTTGT
GAGACTGAGCATCTTCAAGTACGAACAGCATTTTCTGTTCTTGTCCATTC
CCTTCTGGACCGTGCATTTCCCCATCGGCCTGCACGGGGGATGGACCCTT
GCCGGCGGCCTGGATCATCGCATTCACGCTGGAGAGCCTGATCGTCAGCG
CCGTTTTGCTCTGCATAATCGCGGGATCGCTCTTTACGGCAGTTGTGAGA
CTGAGCATCTTCAAGTACGAACAGCATTTTCTGTTCTTGTCCATTCCCTT
CTGGACCGTGCATTTCCCCATCGGCCTGCACGGGGGATGGACCCTTGCCG
CATCGCTCATAAACATCACCATCGCGCTGGAAACAGACAGCGTCAGAACC
GAGACGGCGGCTCTCCTTCTGACCGTTGTCGCCGCTGCGGTGATAGCTTC
CTTCGCTTCGATCGTCTTCTATGACCCCATCTACCTCGCCGCAGTCGTGT
GGGCTATTGCTGGCATCGTCGCAAGGGAGGAATACCGTATTGAGAGGCTG
GGGAAGCCCGTGGCGGACGGAGTTACCGAGGGTCTTGAAGCACTTTGGAT
AGCGCTTGTGTGCGTCGGGGTGGTCGGACTTATCGTCTACGCGGTGAGGA
TGAGCATGAGGAAGCACGAGCAACTGCCCGACAGGCACAGAGCGGTCGAT
GGTACCAGTGACGGCAGCCAAACCCGCGCCATATTTTCGTCTTAGCATCG
CTCATAAACATCACCATCGCGCTGGAAACAGACAGCGTCAGAACCGAGAC
GGCGGCTCTCCTTCTGACCGTTGTCGCCGCTGCGGTGATAGCTTCCTTCG
CTTCGATCGTCTTCTATGACCCCATCTACCTCGCCGCAGTCGTGTGGGCT
ATTGCTGGCATCGTCGCAAGGGAGGAATACCGTATTGAGAGGCTGGGGAA
GCCCGTGGCGGACGGAGTTACCGAGGGTCTTGAAGCACTTTGGATAGCGC
TTGTGTGCGTCGGGGTGGTCGGACTTATCGTCTACGCGGTGAGGATGAGC
ATGAGGAAGCACGAGCAACTGCCCGACAGGCACAGAGCGGTCGATGGTAC
CAGTGACGGCAGCCAAACCCGCGCCATATTTTCGTCTTAG
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