mRNA_F-distichus_contig10688.586.1 (mRNA) Fucus distichus monoicous
|
Overview
Homology
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE) HSP 1 Score: 168 bits (425), Expect = 2.190e-45 Identity = 97/220 (44.09%), Postives = 143/220 (65.00%), Query Frame = 1
Query: 1 RPRLEELTFGTFNVRTASVNEVNGIGH-IDILLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILI-KSNFVTLVEAYAPTE--EAPEG----QKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYTCF 636
+ R +L+FGTFNVRT + + N IGH + +++ C+A GC+VIGLQET+R +I GY + +SG + K ++G +GVG+AIKE + + GE+G T+ECIS +K R+ I ++ VT + YAPTE EG KD + AL+ + V +R+++ VL DANARTG+R +G D++++GAYGRD +N NG+ LLG A DN+L+L T F
Sbjct: 169 KAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYF 386
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE) HSP 1 Score: 160 bits (405), Expect = 7.100e-45 Identity = 93/220 (42.27%), Postives = 138/220 (62.73%), Query Frame = 1
Query: 1 RPRLEELTFGTFNVRTASVNEVNGIGH-IDILLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILI-KSNFVTLVEAYAPTEEAPE------GQKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYTCF 636
+ R +L+FGTFNV T + + N IGH + +++ C+A GC+VIGLQET+R+ +I GY + +SG + K ++G +GVG+AIKE I + GE+G T+ECIS +K R+ I ++ VT V YAPTE KD + AL+ + V +R+++ VL ANARTG+R +G D++++GA GRD +N NG+ LL A DN+L+L T F
Sbjct: 3 KAREGDLSFGTFNVHTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRRRDGC--CDAKIMGANGRDIMNNNGERLLELASDNQLSLTNTYF 220
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.000e-44 Identity = 95/218 (43.58%), Postives = 140/218 (64.22%), Query Frame = 1
Query: 1 RPRLEELTFGTFNVRTASVNEVNGIGH-IDILLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILI-KSNFVTLVEAYAPTEEAPE------GQKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYT 630
+ R +L+FGTFNVRT + + N IGH + +++ C+A GC+VIGLQET+R +I GY + +SG + K ++G +GVG+AIKE + + GE+G T+ECIS +K R+ I ++ VT V YAPTE KD + AL+ + V +R+++ VL DANARTG+R +G D++++GAYGRD +N NG+ LLG A DN+L+L T
Sbjct: 80 KAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNT 295
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE) HSP 1 Score: 163 bits (412), Expect = 2.300e-44 Identity = 93/220 (42.27%), Postives = 138/220 (62.73%), Query Frame = 1
Query: 1 RPRLEELTFGTFNVRTASVNEVNGIGH-IDILLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILI-KSNFVTLVEAYAPTEEAPE------GQKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYTCF 636
+ R +L+FGTFNVRT + + N IGH + +++ C+A GC+VIGLQET+R +I GY + +SG + K ++G +GVG+ IKE + + GE+G T+ECI +K R+ I ++ V V YAPTE KD + AL+ + V +R+++ VL DANARTG+R +G D++++GAYGRD +N NG+ LLG A DN+L+L T F
Sbjct: 75 KAREGDLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYF 292
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE) HSP 1 Score: 160 bits (404), Expect = 3.780e-44 Identity = 90/220 (40.91%), Postives = 138/220 (62.73%), Query Frame = 1
Query: 1 RPRLEELTFGTFNVRTASVNEVNGIGH-IDILLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILI-KSNFVTLVEAYAPTEEAPE------GQKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYTCF 636
+ R +L+FGTFNVRT + + N IGH + +++ C+A GC+VIGLQET+R+ +I GY + +SG + K ++G +GVG+AIKE + + GE+G +ECI +K R+ I ++ +T V YAPTE KD + AL+ + V + +++ VL DANARTG+R +G D++++G YGRD +N NG+ LLG A +N+L+L T F
Sbjct: 142 KAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRIGRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDGC--CDAKIMGVYGRDIMNNNGERLLGLASNNQLSLTNTYF 359
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE) HSP 1 Score: 166 bits (421), Expect = 6.440e-44 Identity = 95/220 (43.18%), Postives = 141/220 (64.09%), Query Frame = 1
Query: 1 RPRLEELTFGTFNVRTASVNEVNGIGH-IDILLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILI-KSNFVTLVEAYAPTEEAPE------GQKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYTCF 636
+ R +L+FGTFNV T + + N IGH + +++ C+A GC+VIGLQET+R+ +I GY + +SG + K ++G +GVG+AIKE + + GE+G T+ECIS +K R+ I ++ VT V YAPTE KD + AL+ + V +R+++ VL DANARTG+R +G D++++GAYGRD +N NG+ LLG A DN+L+L T F
Sbjct: 651 KAREGDLSFGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYF 868
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.090e-41 Identity = 93/220 (42.27%), Postives = 139/220 (63.18%), Query Frame = 1
Query: 1 RPRLEELTFGTFNVRTASVNEVNGIGH-IDILLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILI-KSNFVTLVEAYAPTEEA------PEGQKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYTCF 636
+ R +L+FGTF+VRT + N IGH + +++ +A GC+VIGLQET+R+ +I GY + +SG + K ++G+ GVG+AIKE + + GE+G +ECIS +K R+ I ++ VT V YAPTE KD + AL+ + V +R+++ VL DANARTG+R +G D++++GAYGRD +N NG+ LLG A DN+L+L T F
Sbjct: 149 KAREGDLSFGTFSVRTLVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYF 366
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5K5A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A7_9PHAE) HSP 1 Score: 159 bits (403), Expect = 1.740e-41 Identity = 93/220 (42.27%), Postives = 137/220 (62.27%), Query Frame = 1
Query: 1 RPRLEELTFGTFNVRTASVNEVNGIGH-IDILLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILIKSNF-VTLVEAYAPTEEAPE------GQKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYTCF 636
+ R +L+FGTFNVRT + + N IGH + +++ +A GC+VIGLQET+R+ +I GY + +SG + K ++G +GVG+AIKE + + GE+G T+ECIS +K R+ I V V YAPTE KD + AL+ + V +R+++ VL DANARTG+R +G D++++GAYGRD +N NG+ LG A DN+L+L T F
Sbjct: 127 KAREGDLSFGTFNVRTLAYSGRNPIGHNVMTVMQIWSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGHTCGVISVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERRLGLASDNQLSLTNTYF 344
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE) HSP 1 Score: 157 bits (398), Expect = 6.000e-41 Identity = 92/219 (42.01%), Postives = 136/219 (62.10%), Query Frame = 1
Query: 1 RPRLEELTFGTFNVRTASVNEVNGIGH-IDILLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILI-KSNFVTLVEAYAP-----TEEAPEGQKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYTCF 636
+ R ++++FGTFNVRT + + N IGH + +++ C+ GC+VIGLQET+R+ +I GY V +SG + K ++G +GVG+AIKE + AGE+G T+ECIS +K R+ I ++ VT V YAP T KD AL+ + V +R+++ VL DANA TG R +G D++++GAYGRD +N NG+ LG A N+L+L T F
Sbjct: 117 KAREDDVSFGTFNVRTLAYSGRNPIGHNVMTVMQICSTNGCDVIGLQETRREGQGSIAHDGYVVIWSGARAGTKDKRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPRTVRTTAGGDVNAKDSLWTALDAAIREVHSRDHLVVLMDANAHTGGRRDGC--CDAKIMGAYGRDIMNNNGERFLGLALGNQLSLTNTYF 333
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE) HSP 1 Score: 147 bits (370), Expect = 3.080e-39 Identity = 82/189 (43.39%), Postives = 120/189 (63.49%), Query Frame = 1
Query: 91 LLRTCAAKGCNVIGLQETKRDETSTIPASGYRVFFSGDCSKVKGRKGQYGVGLAIKEEIVKKAGEDGITIECISASPLKGRILI-KSNFVTLVEAYAPTEEAPE------GQKDKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSRMLGAYGRDKLNKNGKLLLGFAEDNKLALMYTCF 636
+++ C+A GC+VIGLQET+R+ +I GY + +SG + K ++G +GVG+AIKE + + GE+G T+ECIS +K R+ I ++ VT V YAPTE KD + AL+ + V +R+++ VL DANARTG+R GG D+++LGAYGRD +N NG+ L G A DN+ +L T F
Sbjct: 3 VMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYF 189 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10688.586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10688.586.1 >prot_F-distichus_contig10688.586.1 ID=prot_F-distichus_contig10688.586.1|Name=mRNA_F-distichus_contig10688.586.1|organism=Fucus distichus monoicous|type=polypeptide|length=212bp RPRLEELTFGTFNVRTASVNEVNGIGHIDILLRTCAAKGCNVIGLQETKRback to top mRNA from alignment at F-distichus_contig10688:5204..5839- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10688.586.1 ID=mRNA_F-distichus_contig10688.586.1|Name=mRNA_F-distichus_contig10688.586.1|organism=Fucus distichus monoicous|type=mRNA|length=636bp|location=Sequence derived from alignment at F-distichus_contig10688:5204..5839- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10688:5204..5839- >mRNA_F-distichus_contig10688.586.1 ID=mRNA_F-distichus_contig10688.586.1|Name=mRNA_F-distichus_contig10688.586.1|organism=Fucus distichus monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at F-distichus_contig10688:5204..5839- (Fucus distichus monoicous)back to top |