mRNA_F-distichus_contig106845.584.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: A0A6H5L023_9PHAE (LisH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L023_9PHAE) HSP 1 Score: 214 bits (546), Expect = 3.270e-65 Identity = 103/115 (89.57%), Postives = 111/115 (96.52%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGLEDHPDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 345
SPFD+WLLLRGVKTMH+RVEKQQENA+RVARFLKAHPC THVYY+GLE HPD+DIHMAQASG GSVVCFRTGSL+FSQHIV+VTKLFKITVSFGSVNSLIS+P AMSHASIPAEV
Sbjct: 363 SPFDSWLLLRGVKTMHIRVEKQQENAIRVARFLKAHPCTTHVYYTGLESHPDYDIHMAQASGGGSVVCFRTGSLAFSQHIVSVTKLFKITVSFGSVNSLISMPAAMSHASIPAEV 477
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: A0A835Z2Q6_9STRA (Cystathionine beta-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q6_9STRA) HSP 1 Score: 198 bits (504), Expect = 2.950e-59 Identity = 96/115 (83.48%), Postives = 104/115 (90.43%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGLEDHPDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 345
SPFD+WLLLRGVKTMH+RVE+QQ+NAL VA FL AHP THVYY+GL HP HD+HM+QASG GSV+CFRTGSL FSQHIVT TKLFKITVSFGSVNSLISLPGAMSHASIPAEV
Sbjct: 326 SPFDSWLLLRGVKTMHIRVERQQDNALAVANFLSAHPQVTHVYYTGLPSHPGHDLHMSQASGGGSVICFRTGSLPFSQHIVTHTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 440
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: A0A836C8G0_9STRA (Cystathionine beta-lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G0_9STRA) HSP 1 Score: 195 bits (495), Expect = 6.760e-58 Identity = 95/115 (82.61%), Postives = 103/115 (89.57%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGLEDHPDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 345
SPFD+WLLLRGVKTMH+RVE+QQENAL VA FL AHP +HVYY+GL HP H +HM+QASG GSV+CFRTGSL FSQHIVT TKLFKITVSFGSVNSLISLPGAMSHASIPAEV
Sbjct: 329 SPFDSWLLLRGVKTMHIRVERQQENALAVAAFLSAHPRISHVYYTGLPSHPGHGLHMSQASGGGSVICFRTGSLPFSQHIVTHTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 443
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: A0A7S2RJ88_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ88_9STRA) HSP 1 Score: 165 bits (418), Expect = 6.670e-50 Identity = 82/118 (69.49%), Postives = 95/118 (80.51%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGLEDHPDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTK---LFKITVSFGSVNSLISLPGAMSHASIPAEV 345
+PFD WLLLRG+KTMH+RVE+ QENA+++A FL+AHP THVYY+GL DHP +H AQA GAG VVCFRTGS FS+ + + LFKITVSFGSVNSLISLPG MSHASIPAEV
Sbjct: 26 APFDCWLLLRGLKTMHVRVERAQENAMQIATFLQAHPLVTHVYYAGLPDHPSKAMHDAQAYGAGVVVCFRTGSYDFSRQVASAAAKSGLFKITVSFGSVNSLISLPGDMSHASIPAEV 143
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: A0A5D6YBN8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YBN8_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.860e-49 Identity = 88/117 (75.21%), Postives = 94/117 (80.34%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGL--EDHPDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 345
+PFD WLLLRGVKTM LRV Q+NA +VA FL+ HP T V+YS L D IH AQA GAGSVVCFRTGSL+FSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIP EV
Sbjct: 52 APFDCWLLLRGVKTMSLRVMTAQQNAEQVAGFLRDHPSVTRVFYSSLLPATSADRAIHEAQAKGAGSVVCFRTGSLAFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPEEV 168
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: A0A2P4YAU4_9STRA (Cystathionine beta-lyase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAU4_9STRA) HSP 1 Score: 165 bits (417), Expect = 5.160e-49 Identity = 85/117 (72.65%), Postives = 95/117 (81.20%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGL--EDHPDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 345
+PFD WLLLRGVKTM LRV Q+NA +VA FL HP T V+Y+ L E+ PD IH +QA G GSVVCFRTGSL+FSQH++TVTKLFKITVSFGSVNSLISLPGAMSHASIP EV
Sbjct: 85 APFDCWLLLRGVKTMSLRVLAAQKNAAKVANFLNDHPLITKVHYTNLLPENSPDRQIHESQARGCGSVVCFRTGSLAFSQHLLTVTKLFKITVSFGSVNSLISLPGAMSHASIPEEV 201
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: H3G7H2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7H2_PHYRM) HSP 1 Score: 163 bits (413), Expect = 7.730e-47 Identity = 84/117 (71.79%), Postives = 95/117 (81.20%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGL--EDHPDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 345
+PFD WLLLRGVKTM LRV Q+NA++VA FL HP V+Y+ L E+ PD IH +QA G GSVVCFRTGSL+FSQH++TVTKLFKITVSFGSVNSLISLPGAMSHASIP EV
Sbjct: 235 APFDCWLLLRGVKTMSLRVLAAQKNAIKVANFLNDHPLIQKVHYTSLLPENSPDRQIHDSQARGCGSVVCFRTGSLAFSQHLLTVTKLFKITVSFGSVNSLISLPGAMSHASIPEEV 351
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: A0A2D4BE33_PYTIN (Cystathionine beta-lyase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE33_PYTIN) HSP 1 Score: 166 bits (420), Expect = 1.040e-46 Identity = 87/117 (74.36%), Postives = 96/117 (82.05%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGL--EDHPDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 345
+PFD WLLLRGVKTM+LRV Q+NA +VA FL+ HP THVYYS L D D IH +QA GAGSVVCFRTGSL+ SQH+V+VTKLFKITVSFGSVNSLISLPGAMSHASIP EV
Sbjct: 369 APFDCWLLLRGVKTMNLRVLTAQQNAEQVASFLQDHPMVTHVYYSALLPVDSADRRIHESQARGAGSVVCFRTGSLAISQHVVSVTKLFKITVSFGSVNSLISLPGAMSHASIPEEV 485
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: K3XBP1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBP1_GLOUD) HSP 1 Score: 164 bits (415), Expect = 5.800e-46 Identity = 86/117 (73.50%), Postives = 94/117 (80.34%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGL--EDHPDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 345
+PFD WLLLRGVKTM LRV Q NA +VA FL+ HP TH YYS L + D IH +Q+ G+GSVVCFRTGSL+FSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIP EV
Sbjct: 371 APFDCWLLLRGVKTMSLRVLTAQTNAEQVANFLRDHPLVTHTYYSNLLPANSADRAIHESQSKGSGSVVCFRTGSLAFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPEEV 487
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Match: M4BF03_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BF03_HYAAE) HSP 1 Score: 163 bits (413), Expect = 1.340e-45 Identity = 85/117 (72.65%), Postives = 95/117 (81.20%), Query Frame = 1
Query: 1 SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGLEDH--PDHDIHMAQASGAGSVVCFRTGSLSFSQHIVTVTKLFKITVSFGSVNSLISLPGAMSHASIPAEV 345
+PFD WLLLRGVKTM LRV QENA++VA FL HP V+Y+ L D PD IH +QA G+GSVVCFRTGSL+FSQH++TVTKLFKITVSFGSVNSLISLPGAMSHASIP EV
Sbjct: 382 APFDCWLLLRGVKTMSLRVLAAQENAVKVANFLNDHPLIKTVHYTNLLDEHSPDRKIHDSQARGSGSVVCFRTGSLAFSQHLLTVTKLFKITVSFGSVNSLISLPGAMSHASIPEEV 498 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106845.584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106845.584.1 >prot_F-distichus_contig106845.584.1 ID=prot_F-distichus_contig106845.584.1|Name=mRNA_F-distichus_contig106845.584.1|organism=Fucus distichus monoicous|type=polypeptide|length=115bp SPFDAWLLLRGVKTMHLRVEKQQENALRVARFLKAHPCCTHVYYSGLEDHback to top mRNA from alignment at F-distichus_contig106845:206..1928- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106845.584.1 ID=mRNA_F-distichus_contig106845.584.1|Name=mRNA_F-distichus_contig106845.584.1|organism=Fucus distichus monoicous|type=mRNA|length=1723bp|location=Sequence derived from alignment at F-distichus_contig106845:206..1928- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106845:206..1928- >mRNA_F-distichus_contig106845.584.1 ID=mRNA_F-distichus_contig106845.584.1|Name=mRNA_F-distichus_contig106845.584.1|organism=Fucus distichus monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at F-distichus_contig106845:206..1928- (Fucus distichus monoicous)back to top |