mRNA_F-distichus_contig10673.575.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10673.575.1
Unique NamemRNA_F-distichus_contig10673.575.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: D7FRZ5_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ5_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 5.220e-120
Identity = 178/264 (67.42%), Postives = 217/264 (82.20%), Query Frame = 1
Query:    1 STVICRDDRDGDLSDDEAVVAGYCLYQYESVKVVNYCVFSDTDVWDTVEQSTMESYLIRFIADVVEARAYVFGXXXXXXXXXXFLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQWNDAGTKSDVVVNATYACAIISFVFAFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVS-SDQVDLSYKTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQV 789
            S VICR DR  DL ++EAV+AGYC  QYESV+VVNYCVF+DTD+WD VEQS + +YL  FIADV+ ARAYVFG          F+Y+GLLQIP LVA++VWSCV L+L+ LL +GYGLW+TAV W+D GTK D +V A YACA++++V AFLW CLFCFLAKRI+LAIG+IK+AGR+IA+MP+IV WP+VELVA+I F+A+W  YAAYTASLG+ITTKTV S +   DLSYK Y+FDQQ +YRGWFL+FCLFWTLNFITA GQ+
Sbjct:   33 SVVICRYDRPDDLDNEEAVLAGYCNPQYESVEVVNYCVFTDTDIWDNVEQSDLANYLSSFIADVITARAYVFGFGFGVATLVAFVYIGLLQIPFLVAILVWSCVLLVLLCLLGLGYGLWVTAVDWDDDGTKEDYIVTAAYACAVVAWVLAFLWTCLFCFLAKRIALAIGVIKEAGRSIASMPIIVFWPVVELVASIAFVAIWMYYAAYTASLGDITTKTVESDTGGYDLSYKVYDFDQQVQYRGWFLLFCLFWTLNFITAMGQI 296          
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 1.590e-116
Identity = 175/261 (67.05%), Postives = 212/261 (81.23%), Query Frame = 1
Query:    7 VICRDDRDGDLSDDEAVVAGYCLYQYESVKVVNYCVFSDTDVWDTVEQSTMESYLIRFIADVVEARAYVFGXXXXXXXXXXFLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQWNDAGTKSDVVVNATYACAIISFVFAFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVS-SDQVDLSYKTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQ 786
            V+CR DR  DL D+EAV+AGYC  QYESV+VVNYCVF+DTD WD VEQS + +YL  FIADV+ ARAYVFG          F+Y+GLLQIP LVA++VWSCV L+L+ LL +GYGLW+TAV W+D GTK D +V A Y CA++++V AFLW CLFCFLAKRISLAIG+IK+AGR+IA+MP+IV WP+VELVA+I F+A+W  YAAYTASLG+ITTKTV S +   DLSYK Y+FDQQ +YRGWFL+FCLFWTLNF+ A GQ
Sbjct:  102 VVCRYDRPDDLDDEEAVLAGYCNPQYESVEVVNYCVFTDTDTWDDVEQSDLANYLSSFIADVITARAYVFGFGFGVATLVAFVYIGLLQIPFLVAILVWSCVLLVLLCLLGLGYGLWVTAVDWDDDGTKEDYIVTAAYVCAVVAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIASMPIIVFWPVVELVASIAFVAIWMYYAAYTASLGDITTKTVESDTGGYDLSYKVYDFDQQVQYRGWFLLFCLFWTLNFVAAMGQ 362          
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 1.510e-44
Identity = 95/253 (37.55%), Postives = 147/253 (58.10%), Query Frame = 1
Query:   61 AGYCLYQYESVKVVNYCVFSDTDVWDT-VEQSTMESYLIRFIADVVEARAYVFGXXXXXXXXXXFLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQWNDAGTKSDVVVNATYACAIISFVFAFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVSSDQVDLSYKTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQVCLCIVVCMY 816
            AG C+YQ ESV  V  CVFS+ +V D  V+     +YL    +DV  AR ++FG          F YLG+LQ+PGLV +++W  +A +   L+A+G+G    +  W   G  +D  V  +     +++  AFL++CL  FL K+I+LA GIIK++ RAI  + ++   PL++  A + F+  W VY+ YTAS+ +ITT+ V       L+ K++E+  + E RGW+L+F  FWT  F+ A GQ+ + + V  Y
Sbjct:  158 AGVCMYQVESVDFVGRCVFSEPEVLDKFVDVGGDVAYLQEAASDVYAARGWIFGFGFCFSTILGFFYLGMLQLPGLVCMMIWGSIACVFFILVAMGFGFVSLSEDWEGDGEHTDTQVMGSRVTGYLAYGCAFLFLCLIVFLRKQIALANGIIKESVRAIGTVKMMFFMPLLQCAAIVAFLVPWVVYSVYTASMADITTEEVAG-----LTVKSFEYSDEVEKRGWYLLFVFFWTTQFVVAMGQIVVALTVVKY 405          
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.660e-40
Identity = 90/254 (35.43%), Postives = 141/254 (55.51%), Query Frame = 1
Query:   64 GYCLYQYESVKVVNYCVFSDTDVWDT-VEQSTMESYLIRFIADVVEARAYVFGXXXXXXXXXXFLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQW--NDAGTKSDVVVNATYACAIISFVFAFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVSSDQVDLSYKTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQVCLCIVVCMY 816
            G C+YQ ESV V+N+C+F+D  + D  V  ++  SY+ +F+AD+  AR ++ G          F+Y  LL++PG+VA++ W  +  ++    A+GYGL+    +W  +     +DV +       I  +V A L+ CL  F+ +RI LA  I+K+A RAI  +P ++L P+VE V  + F      Y  Y AS+G+ +T TV       L  KT  +  + +  GW+L+FCLFWT  FI A GQ+ + + V  Y
Sbjct:  148 GACMYQIESVDVLNHCLFTDPAIADAFVSLNSQMSYMQQFLADIYTARNWILGFGFGFSLVMGFVYCLLLRVPGVVAIMTWGSILAVIALFAAVGYGLYTKGDEWAADTTNQHTDVQITIARIFGIAGYVLAGLFACLALFMCRRIRLATSIMKEAARAIGKIPAMILMPVVEAVGLVLFFVPLVFYGVYVASMGDFSTTTVAG-----LEVKTVTYGSEVQGMGWYLLFCLFWTTQFIIAMGQIVVALAVVKY 396          
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: A0A7S2XX14_9STRA (Choline transporter-like protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX14_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.280e-38
Identity = 91/276 (32.97%), Postives = 139/276 (50.36%), Query Frame = 1
Query:   10 ICRDDRDGDLSDDEAVVAGYCLYQYESVKVVNYCVFSDTDVWDTVEQSTMESY-------LIRFIADVVEARAYVFGXXXXXXXXXXFLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQWNDAGTKSDVVVNATYACAIISFVFAFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVSSDQVDLSYKTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQVCLCIVVCMY 816
            IC D+ DG            C  +Y+S   +  C+F+D  ++     S            L     D+  A+ Y+            F+YL +L++PGLV +I+W+ +  I   L A+ YGLW   V W D G   +  V     CA I+ V A +W+CL C + K I LA G+I +A R I  MPL+  WP+++L+    FM  WT Y  YTAS+GE   +T    D   ++   Y++D   ++RGW+L+FCL WT+ ++ A GQ+ L + V  +
Sbjct:  102 ICTDEPDGPEE---------CNVKYQSHPAMGRCIFTDRAIFREFMSSVSGRSKGGSGVTLHSAAKDLWTAKYYILNFGLVVSVVMGFIYLWILRLPGLVGMIIWTSIFAIFFTLAALAYGLWYQGVLWVDDGIHDEYDVLMMKICAGIAGVLAIVWMCLACCMRKNIILAGGVITEAARPILLMPLLFAWPILQLIGVALFMWPWTYYVLYTASMGEWVNET----DAFGMTTPQYQYDDSVQWRGWYLLFCLIWTVEWLVAIGQIVLALSVAQW 364          
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: A0A6V2WBV2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2WBV2_HETAK)

HSP 1 Score: 149 bits (376), Expect = 1.560e-37
Identity = 97/264 (36.74%), Postives = 139/264 (52.65%), Query Frame = 1
Query:   13 CRDDRD---GDLSDDEAVVAGYCLYQYESVKVVNYCVFSDTDVWDTVEQSTMESYLIRFIADVVEARAYVFGXXXXXXXXXXFLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQWNDAGTKSDVVVNATYACAIISFVF---AFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVSSDQVDLSYKTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQ 786
            C DD D      +D   V  GYC YQY S  ++N C+F ++ +   V  ++  SY   F+ DV  A+ YV G           +YL LL++PG V ++VW  + L+ + L A+G GL+      + A + S      T    +   VF   A ++VC+   L  RI+LA+ I+K+A  AI  M L++ +PLV++V  + F+  W  YA YTASLG  +T T  S      S K++ F    EYR WFL+FC FWT  FI A GQ
Sbjct:  121 CVDDSDIPSAYTTDSLKVAGGYCQYQYASYDILNRCIFQNSTLASLVSDTSQWSYAEDFVGDVWAAKDYVLGIGLGFAIALAIVYLALLRLPGFVVLMVWGSIWLVFLLLAALGGGLFYFGYTQSQAASSSYTSTEIT-CMEVFGGVFGALALVFVCVVLCLRDRITLAVDIMKEAAHAIMDMTLLLFFPLVKVVGFLLFLLPWLYYAVYTASLGSFSTYTTSSG----YSVKSWSFSSDVEYRLWFLLFCFFWTTQFIIAVGQ 379          
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: A0A7S2XXR1_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR1_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.950e-37
Identity = 92/267 (34.46%), Postives = 140/267 (52.43%), Query Frame = 1
Query:    7 VICRDDRDGDLSDDEAVVAGYCLYQYESVKVVNYCVFSDTDVWDT--VEQSTMESYLIRFIADVVEARAYVFGXXXXXXXXXXFLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQWNDAGT--KSDVVVNATYACAIISFVFAFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVSSDQVDLSYKTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQVCL 795
            +IC+++ D   +    V +G C ++Y S      C+F+++ + D   V      S L  F AD+  AR YVFG          FLY   L +PG+++  VWS + LI +  LA+G  L +   +W D     + D  +        I    A ++ CL  FL KRI LA+GIIK+AGR++  MP I+ +PL+++   + FM  W  +  YTAS+G+I  K +       ++YK Y +  + E RGW+L+F  FWT  FI A GQ+ L
Sbjct:  118 LICKENVDTSRTFVGLVASGDCQFKYASTNRFGICIFTNSSMNDVLNVYAGDQTSALEEFAADIYTARGYVFGFGFVIAIVMGFLYTWFLHLPGVISTFVWSTIILIFLLKLALGAWLIVKGGEWEDEDPQMREDYEILGLKVLGGIVIAVAVIYACLIIFLRKRIQLAVGIIKEAGRSLMDMPAIIFFPLLQVFGLVLFMVPWVFFVIYTASMGDIEVKQMNG-----VNYKDYVYSAEVEERGWYLLFMWFWTTQFIIALGQIVL 379          
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: A0A812RYG8_SYMMI (Choline transporter-like protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RYG8_SYMMI)

HSP 1 Score: 138 bits (347), Expect = 4.730e-34
Identity = 78/204 (38.24%), Postives = 115/204 (56.37%), Query Frame = 1
Query:  178 FIADVVEARAYVFGXXXXXXXXXXFLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQWNDAGTKSDVVVNATYACAIISFVFAFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVSSDQVDLSYKTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQV 789
            F AD+ + R Y+FG          F YL  L+IPG++  ++W+ +  I + L      L+  + QW +   +    V    A +II FV   L+VCL C + KRI LA+GI+K+A RA+AAMP++VL P+ + +A + F+  WT+YA Y AS G+I       +   +  YKT E+DQ T     +L+FC FWT  FI A GQ+
Sbjct:   46 FFADLFQLRGYIFGFGIGIALFLSFFYLFFLRIPGVLFTMIWTVLIAIFLVLAVGSIMLYTLSQQWANNDDRKTSEVRTLQALSIIGFVLTGLYVCLLCVMRKRIVLALGIVKEASRALAAMPILVLMPVFQALAIVVFLVPWTIYAIYLASSGDIEVHETSDTPGDETQYKTMEYDQNTRLAFLYLLFCWFWTSEFILAVGQI 249          
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: A0A7S1VN07_9STRA (Choline transporter-like protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VN07_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.730e-33
Identity = 91/254 (35.83%), Postives = 133/254 (52.36%), Query Frame = 1
Query:   64 GYCLYQYESVKVVNYCVFSDTDVWDTVEQSTMESYLIRFI-----------ADVVEARAYVFGXXXXXXXXXXFLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQW--NDAGTKSDVVVNATYACAIISFVFAFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVSSDQVDLSYKTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQ 786
            G+  Y  +S  V++ C F   D    ++ +T  +  +  I           AD+  +RAYV G          F Y+ LL++PGL+ +++W+ + +        G   +  +  W   D  T     ++ T   +  SF    L + L C L + I LAIG +KQAGRAIA MPLIVL P+++ +  I FM V+TVYA Y ASLG +T K       +D++ +TYEFD+  E  GW+L+FCLFWT NFI A G 
Sbjct:  193 GFAYYVGDSYAVLSRC-FLTLDALIAIQDTTNATTTLDRIEAGYEFWNNLYADLWTSRAYVLGFGFGLSLFVSFCYVMLLRLPGLLNMVIWTSLLIANTMFFVAGAYAYRHSKMWAEQDPPTYDQRAIDVTLYGSYASFGVGVLLLLLLCCLRRHIQLAIGCVKQAGRAIARMPLIVLVPILQAIGLIAFMCVFTVYAVYLASLGHVTVKNFPVPGDIDMAVRTYEFDEFVERCGWYLLFCLFWTGNFIVAVGD 445          
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.860e-29
Identity = 69/193 (35.75%), Postives = 115/193 (59.59%), Query Frame = 1
Query:  250 FLYLGLLQIPGLVAVIVWSCVALILVALLAIGYGLWITAVQWNDAGTKSDVVVNATYACAIISFVFAFLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMAVWTVYAAYTASLGEITTKTVVSSDQVDLSY----KTYEFDQQTEYRGWFLIFCLFWTLNFITAFGQVCLCIVVCMY 816
            F YLG+LQ+PGLV +++W  +A +   L+A+G+G    +  W   G  +D  V  +     +++  AFL++CL  FL K+I+LA GIIK++ RAI  + ++   PL++  A + F+  W VY+ YTAS+ ++    +V   ++ L Y    K++E+  + E RGW+L+F  FWT  F+ A GQ+ + + V  Y
Sbjct:  289 FFYLGMLQLPGLVCMMIWGSIACVFFVLVAMGFGFVSLSEDWEGDGEHTDAQVMGSRVTGYLAYGCAFLFLCLIVFLRKQITLANGIIKESVRAIGTVKMMFFMPLLQCAAIVAFLVPWVVYSVYTASMADVR---LVKRCRIRLRYSLTVKSFEYSDEVENRGWYLLFVFFWTTQFVVAMGQIVVALTVVKY 478          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10673.575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRZ5_ECTSI5.220e-12067.42Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5JW76_9PHAE1.590e-11667.05Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
D8LIJ7_ECTSI1.510e-4437.55Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A835Z6J7_9STRA1.660e-4035.43Choline transporter-like protein n=1 Tax=Tribonema... [more]
A0A7S2XX14_9STRA2.280e-3832.97Choline transporter-like protein (Fragment) n=2 Ta... [more]
A0A6V2WBV2_HETAK1.560e-3736.74Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S2XXR1_9STRA1.950e-3734.46Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A812RYG8_SYMMI4.730e-3438.24Choline transporter-like protein n=1 Tax=Symbiodin... [more]
A0A7S1VN07_9STRA5.730e-3335.83Choline transporter-like protein n=2 Tax=Grammatop... [more]
A0A6H5L007_9PHAE2.860e-2935.75Choline transporter-like protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10673contigF-distichus_contig10673:307..3755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.5
Seed ortholog evalue6.7e-97
Seed eggNOG ortholog2880.D7FRZ5
KEGG koko:K06515,ko:K15377
KEGG TC2.A.92.1,2.A.92.1.1
KEGG Pathwayko05231,map05231
Hectar predicted targeting categoryother localisation
EggNOG free text desc.choline transmembrane transporter activity
EggNOG OGsKOG1362@1,KOG1362@2759
Ec32 ortholog descriptionCholine transporter-like
Ec32 orthologEc-12_007060.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Exons7
Model size816
Cds size816
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928995.113028-CDS-F-distichus_contig10673:306..4291622928995.113028-CDS-F-distichus_contig10673:306..429Fucus distichus monoicousCDSF-distichus_contig10673 307..429 -
1690885097.578556-CDS-F-distichus_contig10673:306..4291690885097.578556-CDS-F-distichus_contig10673:306..429Fucus distichus monoicousCDSF-distichus_contig10673 307..429 -
1622928995.1269405-CDS-F-distichus_contig10673:701..8181622928995.1269405-CDS-F-distichus_contig10673:701..818Fucus distichus monoicousCDSF-distichus_contig10673 702..818 -
1690885097.5917733-CDS-F-distichus_contig10673:701..8181690885097.5917733-CDS-F-distichus_contig10673:701..818Fucus distichus monoicousCDSF-distichus_contig10673 702..818 -
1622928995.1386325-CDS-F-distichus_contig10673:1050..11851622928995.1386325-CDS-F-distichus_contig10673:1050..1185Fucus distichus monoicousCDSF-distichus_contig10673 1051..1185 -
1690885097.603555-CDS-F-distichus_contig10673:1050..11851690885097.603555-CDS-F-distichus_contig10673:1050..1185Fucus distichus monoicousCDSF-distichus_contig10673 1051..1185 -
1622928995.1526575-CDS-F-distichus_contig10673:1571..16131622928995.1526575-CDS-F-distichus_contig10673:1571..1613Fucus distichus monoicousCDSF-distichus_contig10673 1572..1613 -
1690885097.6122265-CDS-F-distichus_contig10673:1571..16131690885097.6122265-CDS-F-distichus_contig10673:1571..1613Fucus distichus monoicousCDSF-distichus_contig10673 1572..1613 -
1622928995.1712182-CDS-F-distichus_contig10673:2249..23041622928995.1712182-CDS-F-distichus_contig10673:2249..2304Fucus distichus monoicousCDSF-distichus_contig10673 2250..2304 -
1690885097.6234565-CDS-F-distichus_contig10673:2249..23041690885097.6234565-CDS-F-distichus_contig10673:2249..2304Fucus distichus monoicousCDSF-distichus_contig10673 2250..2304 -
1622928995.1902041-CDS-F-distichus_contig10673:2839..30861622928995.1902041-CDS-F-distichus_contig10673:2839..3086Fucus distichus monoicousCDSF-distichus_contig10673 2840..3086 -
1690885097.634903-CDS-F-distichus_contig10673:2839..30861690885097.634903-CDS-F-distichus_contig10673:2839..3086Fucus distichus monoicousCDSF-distichus_contig10673 2840..3086 -
1622928995.2201924-CDS-F-distichus_contig10673:3658..37551622928995.2201924-CDS-F-distichus_contig10673:3658..3755Fucus distichus monoicousCDSF-distichus_contig10673 3659..3755 -
1690885097.648802-CDS-F-distichus_contig10673:3658..37551690885097.648802-CDS-F-distichus_contig10673:3658..3755Fucus distichus monoicousCDSF-distichus_contig10673 3659..3755 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10673.575.1prot_F-distichus_contig10673.575.1Fucus distichus monoicouspolypeptideF-distichus_contig10673 307..3755 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10673.575.1

>prot_F-distichus_contig10673.575.1 ID=prot_F-distichus_contig10673.575.1|Name=mRNA_F-distichus_contig10673.575.1|organism=Fucus distichus monoicous|type=polypeptide|length=272bp
STVICRDDRDGDLSDDEAVVAGYCLYQYESVKVVNYCVFSDTDVWDTVEQ
STMESYLIRFIADVVEARAYVFGFGFGVAIAISFLYLGLLQIPGLVAVIV
WSCVALILVALLAIGYGLWITAVQWNDAGTKSDVVVNATYACAIISFVFA
FLWVCLFCFLAKRISLAIGIIKQAGRAIAAMPLIVLWPLVELVAAITFMA
VWTVYAAYTASLGEITTKTVVSSDQVDLSYKTYEFDQQTEYRGWFLIFCL
FWTLNFITAFGQVCLCIVVCMY
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mRNA from alignment at F-distichus_contig10673:307..3755-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10673.575.1 ID=mRNA_F-distichus_contig10673.575.1|Name=mRNA_F-distichus_contig10673.575.1|organism=Fucus distichus monoicous|type=mRNA|length=3449bp|location=Sequence derived from alignment at F-distichus_contig10673:307..3755- (Fucus distichus monoicous)
AGCACGGTGATATGCCGGGACGACAGGGACGGCGACCTTTCCGACGACGA GGCCGTGGTAGCGGGTTACTGCCTCTACCAGTACGAGTCCGTTAAAGGTG AGGTGAAATAGAAAAGAAACACGGAGCGAGCTCGAGCGGTGGTGGTGGTG CATGTTGTGAAATGGTTGCTGAGAAGCGTGTCGAGAGAGGGGAAACGTGG CCCGCAGCCCCTCCCAGAATTACAGTTTTAACTATTGTCTTGGAATTTGT TTACGTTGCGTCCGTCAGTTCACACGATAGTTTCGCGCGTGCGCCTCCGC CAACCCGCGCTCGCCGAACGCGTATTCCGTTCAAGATCTAATATATTGTG GAATGAGATTCCATCCACACTAAACAACTTAACAGTAGTAGTGCTATCGG TCGCCTGGTTGATACCGGCTGACCTGTGTTGACTTGACTAAACAATACTA ACTGTAGGCTATAGGTTTTAGGCTTTAGGCTACAGTACCCAAAACCCTTG CCCACTCGGTCTTGTTCCCCGTTAATGCTGAATGCTGATTTAGACGAGCA GGACGCACACTCAAAAACAAGCACAAAACAAAAGCATGACACTTCCTGCT ATGTTGAATACTGAAAATTAATACTGTACCTGGTATACAAAAAACGTGAC TGTGTTGGCCCCGTGGCAGTCGTTAACTACTGCGTGTTCTCGGACACCGA TGTGTGGGACACGGTGGAGCAATCCACTATGGAGTCGTACCTTATTCGAT TCATCGCGGACGTGGTGGAGGCGAGGGCCTATGTGTTCGGCTTCGGGTTC GGCGTGGCGATCGCCATATCGTTTCTATACCTCGGGCTGCTCCAGATCCC GGGACTGGTGGCGGTGATCGTGTGGTCGTGCGTCGCTTTAATCCTGGTGG CGCTCTTGGCCATAGGGTAAGTCTGTCTGTCTGTCGGTGTTTACTACCGC GTAGCATACCTTTTCGAAGGGGGCGGATAAATATACCTTGCCGCGGAATA GTACGGTGCTGACACACATTTGGTGCGCTTGCTATCATGGTCGTGTGCAC AGTTGTCTCGTCTCGAGCGCGCGGTTGTAATAGATTACATGGTGGTCTGG TCCCTTACGCTGCTCGCCGGTGATGAGGTTAAGTTGAATAACATACGTTG GTGTAAGCGATGCCGAGTTTTTTCTTGTTGCGTCCTGGCGAAGGGGTTCC AATGCTTGCGTACGTACAGGAGGGCTCTTGGTTGTCTCGGGCCTTTGTCA TCCGCGTTACGGAAGGAAGGGTTTGAATCTCGGGCGTTTGCACAGTACGT GCGGGCATCGCCCGGTGCGCGTCCAGCACGCGCGAGATGAAAGTCCGCGA GGCAATCTCCTCGGAGATTCGATTTCCTGGCTTTCAGGAACGACCACCCC AGTGTTGAGGATTACACTTCTTCTCGAACCTCTCTCCGGCCTCCCCCGCA GGTACGGGCTGTGGATCACCGCGGTGCAGTGGAACGACGCCGGCACCAAG AGTGATGTGAGTTAACAGATCAAGAGGTACTTTCACTGTTATAGGCGGCG AGATAATTTTATCCTCAGCTCTTCAGCTCTAGCTCCAGCCTTCGTGGAGT GTCCACTGTGCGTACCCTCGGGGGAGGGGGGGGGTTAGGCTGGCCGGCTG GCTTCCCGGTTCCCACGAGTTTATTAGGCAGGATCTATCCTGTCTTGAGC CCCAGGTTGGCTGTGAATCGCGTCAAAACGGTGCAAGTTTTTTTTTGTGA CCATTTAAGCAGACCCGTTGCCTCAGCGGAGGCATTATGCTGAGTATATT AAAACACAGCACTGTAGTGGTGTAGTGTATTACTTCAACCGCTATCACTA TAATAGTATGCGTACGCAAGGTATTCGCTTTGTCGTGAAGAATCTCGTGT ACGGTATTGTCAGACTCGTGGAAGGTGGTCACTTGTAAGGGTTCTGCGTG TTGTAGCTGCCGTGACTCTTTTTGCTTGGGGGCCGAGGTGGCATCGCGGC AAACCCTGCGGCCCGGGGATGTCGAGAAGCGTTTCTTGCCTCTCCCTTAA AACTATTGTCCTCTCTCGCGTTTCCCCGATCGCTCTTTTGCCCTGTCCCA CGACGTATCGCGTACCGTTATTTTTTGCCCGCCACGGAACAGGTCGTCGT CAACGCCACGTACGCGTGCGCCATCATCTCTTTTGTGAGTCGGGGCGATC CGTGCCCGCCCTCTCATCAGAGTGAAGCGAGTTTATCCCTCTGTCAGCTT GTCCCCTTGTCGTGATCGCAACGCAAGAGAAGATGTTATGCTGCCTTTTC GCCTCAGAGCGCCCGAGAGTAAGGGGCACGGAGAGACACAAATTAAAAAC AAACATATGAAATGACTAGAGTGCACCAGGTATTGCGTACCCATTTTATC GCTTCGCGTCGCTCTTGCCCTCTTTAGTGGCTACCTTCTGAAGAACGCCT CGCAGGTTATGGTATGCTCATTCGCCGTTCCTTCACGTCGTCGGTGTCGC TGTGGATCTCTCTCTGCTTGACTTCCTCAAACGTTGTATTTTCCGTCCGC TTGCCAACGTGCTTCTTCAGGTTTTTGCGTTTCTGTGGGTTTGCCTGTTC TGCTTCCTGGCGAAGAGAATTTCCCTCGCCATCGGCATCATCAAGCAGGC GGGCCGAGCGATCGCCGCCATGCCACTAATCGTGCTCTGGCCTTTGGTGG AGCTGGTGAGGGAGGACAGGAGGAAAAGGCTTGGAAATGCTGCTATGCTC GTTTGAAGAAGTTGGTTATACAGTATCAAATGATTCGTGCTGGACTAAGG GATACAATGACAATCGATTCTCAACGATCGGCGCTGACGAATGGGGTCAT GGTCTCCGCTTGTAACCCTTCTTCAACCGCCCCCTGCACACTCACAAACA CGCATACACACGAACGCCTCCATTTTATCAACTCCAGGTCGCTGCGATAA CCTTCATGGCCGTGTGGACGGTGTACGCCGCCTACACGGCCAGCCTTGGT GAGATCACGACCAAGACGGTGGTTTCTTCCGATCAGGTCGATCTCTCCTA CAAGGTTAGGAGGGCCCCTCCACCTCACTGCCGATGCTGTATTCTTCTCC ATCCTCTCTCATGCTTGCATTGCCGCAGTCTCTATCTCTCTCAATCTCTC TCTCTCAGTCTCATCGAGTTCAGCGAACGTCTCGTCTCATTACAAATCTG TCTACTCTGCAATTTCAGACTTGAGTTTCAGAAAGGTACCATATACCAGG TATGTCAGAGTAGTCAAGTCATCGACGAGCCTGCGCGCCACGTGTGCTGT CTCCTCACACCTCCTCACACTCACAGACGTACGAGTTCGACCAACAGACA GAGTACCGCGGGTGGTTCCTGATCTTCTGTCTCTTCTGGACGCTTAATTT CATAACCGCCTTCGGACAGGTATGTTTGTGTATAGTTGTATGTATGTAT
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Coding sequence (CDS) from alignment at F-distichus_contig10673:307..3755-

>mRNA_F-distichus_contig10673.575.1 ID=mRNA_F-distichus_contig10673.575.1|Name=mRNA_F-distichus_contig10673.575.1|organism=Fucus distichus monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at F-distichus_contig10673:307..3755- (Fucus distichus monoicous)
AGCACGGTGATATGCCGGGACGACAGGGACGGCGACCTTTCCGACGACGA
GGCCGTGGTAGCGGGTTACTGCCTCTACCAGTACGAGTCCGTTAAAGAGC
ACGGTGATATGCCGGGACGACAGGGACGGCGACCTTTCCGACGACGAGGC
CGTGGTAGCGGGTTACTGCCTCTACCAGTACGAGTCCGTTAAAGTCGTTA
ACTACTGCGTGTTCTCGGACACCGATGTGTGGGACACGGTGGAGCAATCC
ACTATGGAGTCGTACCTTATTCGATTCATCGCGGACGTGGTGGAGGCGAG
GGCCTATGTGTTCGGCTTCGGGTTCGGCGTGGCGATCGCCATATCGTTTC
TATACCTCGGGCTGCTCCAGATCCCGGGACTGGTGGCGGTGATCGTGTGG
TCGTGCGTCGCTTTAATCCTGGTGGCGCTCTTGGCCATAGGTCGTTAACT
ACTGCGTGTTCTCGGACACCGATGTGTGGGACACGGTGGAGCAATCCACT
ATGGAGTCGTACCTTATTCGATTCATCGCGGACGTGGTGGAGGCGAGGGC
CTATGTGTTCGGCTTCGGGTTCGGCGTGGCGATCGCCATATCGTTTCTAT
ACCTCGGGCTGCTCCAGATCCCGGGACTGGTGGCGGTGATCGTGTGGTCG
TGCGTCGCTTTAATCCTGGTGGCGCTCTTGGCCATAGGGTACGGGCTGTG
GATCACCGCGGTGCAGTGGAACGACGCCGGCACCAAGAGTGATGTACGGG
CTGTGGATCACCGCGGTGCAGTGGAACGACGCCGGCACCAAGAGTGATGT
CGTCGTCAACGCCACGTACGCGTGCGCCATCATCTCTTTTGTCGTCGTCA
ACGCCACGTACGCGTGCGCCATCATCTCTTTTGTTTTTGCGTTTCTGTGG
GTTTGCCTGTTCTGCTTCCTGGCGAAGAGAATTTCCCTCGCCATCGGCAT
CATCAAGCAGGCGGGCCGAGCGATCGCCGCCATGCCACTAATCGTGCTCT
GGCCTTTGGTGGAGCTGGTTTTTGCGTTTCTGTGGGTTTGCCTGTTCTGC
TTCCTGGCGAAGAGAATTTCCCTCGCCATCGGCATCATCAAGCAGGCGGG
CCGAGCGATCGCCGCCATGCCACTAATCGTGCTCTGGCCTTTGGTGGAGC
TGGTCGCTGCGATAACCTTCATGGCCGTGTGGACGGTGTACGCCGCCTAC
ACGGCCAGCCTTGGTGAGATCACGACCAAGACGGTGGTTTCTTCCGATCA
GGTCGATCTCTCCTACAAGGTCGCTGCGATAACCTTCATGGCCGTGTGGA
CGGTGTACGCCGCCTACACGGCCAGCCTTGGTGAGATCACGACCAAGACG
GTGGTTTCTTCCGATCAGGTCGATCTCTCCTACAAGACGTACGAGTTCGA
CCAACAGACAGAGTACCGCGGGTGGTTCCTGATCTTCTGTCTCTTCTGGA
CGCTTAATTTCATAACCGCCTTCGGACAGGTATGTTTGTGTATAGTTGTA
TGTATGTATACGTACGAGTTCGACCAACAGACAGAGTACCGCGGGTGGTT
CCTGATCTTCTGTCTCTTCTGGACGCTTAATTTCATAACCGCCTTCGGAC
AGGTATGTTTGTGTATAGTTGTATGTATGTAT
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