mRNA_F-distichus_contig106502.555.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: UPI001939624B (uncharacterized protein LOC120346556 n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939624B) HSP 1 Score: 301 bits (771), Expect = 2.380e-95 Identity = 137/233 (58.80%), Postives = 178/233 (76.39%), Query Frame = 1
Query: 1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
P VF +E GA G K LR F TFGI +E+ +DG FT G+TQ FL++W V+HR++SVANPH+NCRAEL VK VKR+++ N GPSG LDVD F RA+L YRN+ DP T+ SPA+ IFGR +RD +P+ G Y+PH TWREL+ HRE+A+ARRH E+W+AHT+ L L GD+V+LQNL+GNHP++WERTG ++E ++Y QY+VK+DG+GR T+RNR HLRKF P K P
Sbjct: 248 PMVFRSESGAHGLVKRLRESFVTFGIPEEMTSDGGPQFTSGITQEFLKSWGVRHRITSVANPHANCRAELGVKTVKRMLSNNVGPSGFLDVDKFQRAMLLYRNSIDPETRVSPAIIIFGRPIRDLIPIPLGRYSPHETWRELMGHREKALARRHCMEHERWKAHTRLLPPLQVGDHVYLQNLLGNHPKKWERTGTIVEVRQYHQYVVKIDGSGRVTIRNRQHLRKFIPFRKSP 480
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A6J8BAZ8_MYTCO (Integrase catalytic domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BAZ8_MYTCO) HSP 1 Score: 294 bits (752), Expect = 6.510e-93 Identity = 133/229 (58.08%), Postives = 168/229 (73.36%), Query Frame = 1
Query: 1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPI 687
P V+ +E GA G K LR F TFGI +E+ +DG FT G TQ FL+ W V+HRLSSVANPH+NCRAE+AVK VKR++ +N G+LDVD F RA+L YRN+ DP TK SPA+ +FGR +RD +P+ G Y+PH TW EL+ HRE A+A+RH E+W HT L L GD+V++QNLVGNHPRRWERTG V+E ++Y QY+++VDGTGR T+RNR HLRKF P
Sbjct: 201 PMVYKSESGAEGLVKRLRETFVTFGIPEELTSDGGPQFTAGKTQEFLKAWGVRHRLSSVANPHANCRAEMAVKTVKRMLVDNITAIGSLDVDKFQRALLMYRNSIDPETKASPALILFGRPIRDAIPILMGRYSPHETWTELMSHREMALAKRHSREHERWNEHTHHLPTLQVGDHVYIQNLVGNHPRRWERTGTVVEVRQYHQYVIRVDGTGRVTIRNRQHLRKFTPF 429
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A8B6HT33_MYTGA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HT33_MYTGA) HSP 1 Score: 294 bits (752), Expect = 1.820e-92 Identity = 133/229 (58.08%), Postives = 168/229 (73.36%), Query Frame = 1
Query: 1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPI 687
P V+ +E GA G K LR F TFGI +E+ +DG FT G TQ FL+ W V+HRLSSVANPH+NCRAE+AVK VKR++ +N G+LDVD F RA+L YRN+ DP TK SPA+ +FGR +RD +P+ G Y+PH TW EL+ HRE A+A+RH E+W HT L L GD+V++QNLVGNHPRRWERTG V+E ++Y QY+++VDGTGR T+RNR HLRKF P
Sbjct: 343 PMVYKSESGAEGLVKRLRETFVTFGIPEELTSDGGPQFTAGKTQEFLKAWGVRHRLSSVANPHANCRAEIAVKTVKRMLVDNITAVGSLDVDKFQRALLMYRNSIDPETKASPALILFGRPIRDAIPILMGRYSPHETWTELMSHREMALAKRHSREHERWNEHTHHLPTLQVGDHVYIQNLVGNHPRRWERTGTVVEVRQYHQYVIRVDGTGRVTIRNRQHLRKFTPF 571
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: UPI000719C6F0 (uncharacterized protein LOC106812695 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C6F0) HSP 1 Score: 280 bits (717), Expect = 3.890e-90 Identity = 130/231 (56.28%), Postives = 163/231 (70.56%), Query Frame = 1
Query: 7 VFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
V+ ++ GA G K LR F TFGI +E+ +DG F G TQ FL+ W V+HR+SSVANPH+NCRAELAVK VKR++ +N S VD F RA+L YRN+ DP TK SPA+ +FGR +RD +P+ G Y+PH TW EL+ HRE A+ARRH E+W HT L L GD+V+LQNLVGNHPRRWERTG V+E ++Y QY ++VDG GR T+RNR HLRKF P + P
Sbjct: 2 VYRSDSGAEGLVKRLRETFVTFGIPEELTSDGGPQFKAGKTQEFLKAWGVRHRVSSVANPHANCRAELAVKTVKRMLMDNITRSRVPRVDKFQRALLMYRNSVDPETKSSPALILFGRPIRDAIPIPLGRYSPHETWTELMSHREMALARRHSREHERWNEHTHRLPALQVGDHVYLQNLVGNHPRRWERTGTVIEVRQYHQYAIRVDGAGRVTIRNRQHLRKFTPFNRTP 232
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A7D9JJU7_PARCT (Uncharacterized protein K02A2.6-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JJU7_PARCT) HSP 1 Score: 279 bits (713), Expect = 1.300e-89 Identity = 132/233 (56.65%), Postives = 165/233 (70.82%), Query Frame = 1
Query: 1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
P + A GA+G LRR FSTFGI ++ATDG FT LTQ FL+NW V H LSSVA PHSNCRAE+ VK VKR+IT N P+G+LD D+ RAIL YRNTPDP TK SPA IFGR ++D +P+ PG Y PH TW++ L RE+A+ RH+ E+W HTK L LV GD+V +QN +G HP +W++TG+V E ++DQY+V+VDG+GR T+RNR LRKF IP HP
Sbjct: 46 PIIERARDGAKGLIDCLRRTFSTFGIPDDLATDGGPEFTSALTQQFLKNWGVHHCLSSVAYPHSNCRAEVGVKTVKRLITNNTSPNGSLDTDNLQRAILQYRNTPDPETKLSPAQCIFGRPIKDFIPILPGRYQPHPTWKDTLAAREEALRNRHVRSAERWTEHTKRLPPLVVGDHVRIQNQIGPHPTKWDKTGRVAEVHQFDQYVVRVDGSGRMTIRNRKFLRKF--IPVHP 276
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: UPI000B45EB1F (uncharacterized protein LOC110463445 n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45EB1F) HSP 1 Score: 275 bits (702), Expect = 8.120e-88 Identity = 126/231 (54.55%), Postives = 164/231 (71.00%), Query Frame = 1
Query: 7 VFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
V+ +E GA G K LR F TFGI +E+ +DG FT G TQ L+ W V+HRLSSVANPH+NCRAE+AVK VKR++ +N G+L+VD F RA+L YRN+ DP TK SPA+ +FGR++RD + + G Y+P TW EL+ HRE A+A+RH E W +T L L GD+V++QNLVGNHP RWERTG V+E ++Y QY+++VDGTGR T+RNR HLR F P +P
Sbjct: 2 VYKSESGAEGLVKRLRETFVTFGIPEELTSDGGPQFTAGKTQECLKAWGVRHRLSSVANPHANCRAEMAVKTVKRMLVDNITAIGSLNVDKFQRALLMYRNSVDPETKASPALILFGRRIRDAITILMGRYSPRETWTELMSHREMALAKRHSREHELWNDYTHRLPPLQVGDHVYMQNLVGNHPMRWERTGTVVEVRQYQQYVIRVDGTGRVTIRNRQHLRTFTPFQSNP 232
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A6S7H3A3_PARCT (Transposon Ty3-I Gag-Pol poly n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H3A3_PARCT) HSP 1 Score: 283 bits (724), Expect = 6.550e-87 Identity = 133/233 (57.08%), Postives = 167/233 (71.67%), Query Frame = 1
Query: 1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
P + A GA+G LRR FSTFGI ++ATDG FT LTQ FL+NW V HRLSSVA PHSNCRAE+ VK VKR+IT N P+G+LD D+ RAIL YRNTPDP TK SPA IFGR ++D +P+ PG Y PH TW++ L RE+A+ RH+ E+W HTK L LV GD+V +QN +G HP +W++TG+V E +++DQY+V+VDG+GR T+RNR LRKF IP HP
Sbjct: 434 PIIERARDGAKGLIDCLRRTFSTFGIPDDLATDGGPEFTSALTQQFLKNWGVHHRLSSVAYPHSNCRAEVGVKTVKRLITNNTSPNGSLDTDNLQRAILQYRNTPDPKTKLSPAQCIFGRPIKDFIPILPGRYQPHPTWKDTLAAREEALRNRHVRSAERWTEHTKRLPPLVVGDHVRIQNQIGPHPTKWDKTGRVAEVRQFDQYVVRVDGSGRMTIRNRKFLRKF--IPVHP 664
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A7D9LXV2_PARCT (Translation initiation factor IF-2-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LXV2_PARCT) HSP 1 Score: 269 bits (687), Expect = 1.170e-85 Identity = 121/229 (52.84%), Postives = 162/229 (70.74%), Query Frame = 1
Query: 1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPI 687
P + A++G++G LRR F+TFGI E A+DG FT T+ FLQ W V HRLSSVA PHSNCRAE+ VK +KR+ T N +G L+ ++ RAIL YRNTP+P TK SPA IFGR +RD +P+ PG Y PH TWR+ L RE+A+ RH+ E+W HT+ L L+ GD+V +QN G HP +W++TG V+E +++DQY+++VDG+GRTTLRNR LRK+QP+
Sbjct: 15 PIIERAQEGSKGLINCLRRTFTTFGIPDECASDGGPEFTAAATRQFLQEWGVHHRLSSVAYPHSNCRAEVGVKTIKRLFTNNTSANGDLNTNALQRAILQYRNTPEPDTKLSPAQCIFGRPIRDFIPILPGRYRPHPTWRDTLAAREEALRNRHMRAAERWTEHTRRLPPLIVGDHVRIQNQTGTHPTKWDKTGLVIEVRQFDQYIIRVDGSGRTTLRNRKFLRKYQPV 243
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A8B6CHG7_MYTGA (Integrase catalytic domain-containing protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6CHG7_MYTGA) HSP 1 Score: 267 bits (682), Expect = 3.700e-85 Identity = 122/233 (52.36%), Postives = 167/233 (71.67%), Query Frame = 1
Query: 1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPIPKHP 699
P + A GA+G LRR F T+GI E+++DG FT T+ FL+ W V HRLSSVA PHSNCRAE+ VK VKR+IT+N GP+G L+ DS RAIL YRNTPD T+ SPAM +FGR +RD +P+ PG Y PH+TWR+ L RE+A+ RH+ E+ HTK L L GD+V +QN +G +P +W++TG+V+E +++DQY+++VDG+GR TLRNR +RK++P+ K+P
Sbjct: 26 PIIERAHNGAQGLIDCLRRTFVTYGIPDELSSDGGPEFTASTTRQFLKVWGVHHRLSSVAFPHSNCRAEVGVKTVKRLITDNTGPNGELETDSLQRAILQYRNTPDRETRLSPAMCVFGRPIRDFIPILPGRYKPHDTWRDTLSKREEALRHRHMKVAEKLSEHTKQLPPLTIGDHVRIQNQIGANPLKWDKTGQVIEVRQFDQYVIRVDGSGRVTLRNRKFIRKYEPVNKYP 258
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Match: A0A6S7H2S1_PARCT (Uncharacterized protein LOC110465399 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H2S1_PARCT) HSP 1 Score: 262 bits (670), Expect = 5.320e-83 Identity = 127/236 (53.81%), Postives = 161/236 (68.22%), Query Frame = 1
Query: 1 PTVFMAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHRLSSVANPHSNCRAELAVKQVKRIITENCGPSGTLDVDSFHRAILSYRNTPDPYTKGSPAMAIFGRQVRDGLPVSPGHYNPHNTWRELLEHREQAMARRHIAGREQWEAHTKDLVKLVQGDNVFLQNLVGNHPRRWERTGKVLECKEYDQYLVKVDGTGRTTLRNRMHLRKFQPI----PKH 696
P + + GA G LRR+F TFGI E+ATDG FT TQ FL +W V HRLSSVA PHSNCRAE+ VK VKR+IT N GP+GTLD D+ AIL YRNTPD TK SPA IFGR ++D +P++PG Y PH TW++ L REQA+ RH+ E HT+ L L GD V +QN +G HP++W++TG V+E +++DQY ++VDG+GR TLRNR LRKF P+ P+H
Sbjct: 46 PIIERCKDGATGLIHCLRRIFVTFGIPDELATDGGPEFTATSTQDFLTSWGVHHRLSSVACPHSNCRAEVGVKTVKRLITNNTGPNGTLDTDTLQIAILQYRNTPDSTTKLSPAECIFGRPIKDFIPIAPGRYQPHPTWKDTLMTREQALRNRHMRTTEWLSEHTRRLPPLKVGDQVRIQNQIGPHPKKWDKTGLVIEVRQFDQYAIRVDGSGRVTLRNRKFLRKFIPVQQRQPRH 281 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106502.555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106502.555.1 >prot_F-distichus_contig106502.555.1 ID=prot_F-distichus_contig106502.555.1|Name=mRNA_F-distichus_contig106502.555.1|organism=Fucus distichus monoicous|type=polypeptide|length=270bp MAEQGARGFTKHLRRMFSTFGICQEIATDGASVFTGGLTQTFLQNWDVQHback to top mRNA from alignment at F-distichus_contig106502:808..1629- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106502.555.1 ID=mRNA_F-distichus_contig106502.555.1|Name=mRNA_F-distichus_contig106502.555.1|organism=Fucus distichus monoicous|type=mRNA|length=822bp|location=Sequence derived from alignment at F-distichus_contig106502:808..1629- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106502:808..1629- >mRNA_F-distichus_contig106502.555.1 ID=mRNA_F-distichus_contig106502.555.1|Name=mRNA_F-distichus_contig106502.555.1|organism=Fucus distichus monoicous|type=CDS|length=1620bp|location=Sequence derived from alignment at F-distichus_contig106502:808..1629- (Fucus distichus monoicous)back to top |