mRNA_F-distichus_contig106214.529.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 1.030e-17 Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 7 SGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKGSPASDCNMK--KLRSSRVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPIDGFAWP 321
+GWYTS LQLQLASLQLC+ CR V T HLT V + +W S A + L SRVP LRP K++W L C A +V+ L+FG +F+ +D WP
Sbjct: 30 NGWYTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPHSAAEATRSRLVSLGQSRVPALRPRKVTWNLATLSMRHCGDA-FESVDVLVFGDSFDYRVDRVTWP 135
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 2.360e-15 Identity = 41/107 (38.32%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 1 DGSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKGSPASDCNMKKLRSSRVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPIDGFAWP 321
DG WYTST +LQLASL+LC+ CR TLHLT + P + + A + K+L +RVP LR + +W + + + +V+ L FG+AF+ +D WP
Sbjct: 149 DGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWP 255
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.080e-13 Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 1 DGSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKGSPASDCNMKKLRSSRVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPIDGFAWP 321
DG WYTST +LQLASL C+ CR T+HL +P + + A + K+L +RVP LR +++W + + + M ++E L FG AF ++ WP
Sbjct: 64 DGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWP 170
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 2.120e-12 Identity = 36/107 (33.64%), Postives = 55/107 (51.40%), Query Frame = 1
Query: 1 DGSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKGSPASDCNMKKLRSSRVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPIDGFAWP 321
DG WYTST +LQLASL+ C+ CR TLHL +P + + + K+L RVP LR ++W + + + + +++ L FG AF ++ WP
Sbjct: 49 DGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWP 155
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 3.840e-12 Identity = 37/110 (33.64%), Postives = 56/110 (50.91%), Query Frame = 1
Query: 1 DGSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKGSPAS--DCNMKKLRSSRVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPID-GFAWP 321
G WYTST+QLQLASL+LC CR + L L G P+ +W+G+ + ++K+ +RVP +R ++W+L G + V G F+ + G WP
Sbjct: 24 SGGEWYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWP 133
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.040e-11 Identity = 42/113 (37.17%), Postives = 53/113 (46.90%), Query Frame = 1
Query: 4 GSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKG--SPASDCNMKKLRSS--------RVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPIDGF 312
G WY ST+QLQLAS++ CV CR VSTLHLT G P +W S SD RVP RP +++W L S + N+E + F A + D F
Sbjct: 10 GKQWYISTVQLQLASVEFCVACRSVSTLHLTVEEGTPRHLWADTWSDQSDXXXXXXXXXXXGRSVLVRVPPFRPREVTWNLPPSMLSEASKDAFKNLECMSFSDAVERSGDSF 122
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 3.990e-11 Identity = 36/110 (32.73%), Postives = 54/110 (49.09%), Query Frame = 1
Query: 1 DGSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKGSPAS--DCNMKKLRSSRVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPID-GFAWP 321
G WYTST+QLQL SL+LC CR + L L G P +W+G+ + ++K+ +RVP +R ++W+L G + V G F+ + G WP
Sbjct: 55 SGGEWYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWP 164
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 7.590e-11 Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 1
Query: 1 DGSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSG-VPSWMWKGSPASDCNM--KKLRSSRVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPIDGFAWP 321
DG+ WYTST +LQLASLQ CV CR V +LHL + VP+ +W A++ K+ ++ VP RP +++W C V A VE+ + + + +D WP
Sbjct: 20 DGNVWYTSTKELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATEARTGAKRPSTTPVPVFRPREVTWGRPAWLLSDIC-LVFAKVERFLVRQ--DTVVDDVVWP 126
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 1.110e-10 Identity = 34/107 (31.78%), Postives = 55/107 (51.40%), Query Frame = 1
Query: 1 DGSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKGSPASDCNMKKLRSSRVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPIDGFAWP 321
DG+ WYTST +LQ ASL+ C+ CR +HL +P + + A + K+L +RVP LR ++W + + + +V+ L FG F+ ++ WP
Sbjct: 27 DGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWP 133
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 4.490e-10 Identity = 37/107 (34.58%), Postives = 53/107 (49.53%), Query Frame = 1
Query: 1 DGSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKGSPASDCNMKKLRSSRVPTLRPLKLSWELWGSPFEKCCSAVMANVEQLIFGRAFNQPIDGFAWP 321
DG WYTST +LQ ASL+ C+ CR TL L P + A + K+ +RVP LR ++ W + + K + +V +L FG AF ++ AWP
Sbjct: 3 DGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWP 109 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106214.529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106214.529.1 >prot_F-distichus_contig106214.529.1 ID=prot_F-distichus_contig106214.529.1|Name=mRNA_F-distichus_contig106214.529.1|organism=Fucus distichus monoicous|type=polypeptide|length=179bp DGSGWYTSTLQLQLASLQLCVLCRGVSTLHLTTTSGVPSWMWKGSPASDCback to top mRNA from alignment at F-distichus_contig106214:30..566+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106214.529.1 ID=mRNA_F-distichus_contig106214.529.1|Name=mRNA_F-distichus_contig106214.529.1|organism=Fucus distichus monoicous|type=mRNA|length=537bp|location=Sequence derived from alignment at F-distichus_contig106214:30..566+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106214:30..566+ >mRNA_F-distichus_contig106214.529.1 ID=mRNA_F-distichus_contig106214.529.1|Name=mRNA_F-distichus_contig106214.529.1|organism=Fucus distichus monoicous|type=CDS|length=1074bp|location=Sequence derived from alignment at F-distichus_contig106214:30..566+ (Fucus distichus monoicous)back to top |