mRNA_F-distichus_contig10621.527.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: D7FIP5_ECTSI (Uncharacterized protein ycf23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP5_ECTSI) HSP 1 Score: 446 bits (1148), Expect = 2.700e-151 Identity = 241/273 (88.28%), Postives = 256/273 (93.77%), Query Frame = 1
Query: 19 MKSTYFIFATAALSGAESFCFAPTRMSGDVLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPAPKAVEAP 837
M+ST I A AALS A++FCF+P RMSGDVLAPF AGK+LKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDP+LVR AKAVSNVPVCVSAV+PELFPACV AGAEMVELGNFD FYDQGLTF+AEDVLEMTRKTRALLP+ PLSVTVPHTLDL++QV LA ELE LGVDVIQTEGK+SLDPS GG+QGAIERAAPTLAAAHAIS+AV+IPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLP P AVEAP
Sbjct: 1 MRSTCVIAAAAALSCADAFCFSPARMSGDVLAPFQAGKALKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPDLVRAAKAVSNVPVCVSAVDPELFPACVDAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRALLPTTPLSVTVPHTLDLDDQVDLAVELEGLGVDVIQTEGKFSLDPSKGGIQGAIERAAPTLAAAHAISKAVSIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPKPSAVEAP 273
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: A0A835YK10_9STRA (Uncharacterized protein ycf23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK10_9STRA) HSP 1 Score: 321 bits (823), Expect = 2.040e-102 Identity = 173/258 (67.05%), Postives = 210/258 (81.40%), Query Frame = 1
Query: 49 AALSGAESFCFAPTRMSGDVLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVS-NVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPAP 819
A+L G E F MSGD +APF A K+LK+ISG+ FD++LV KVA AA AGG TH+DIA DPELV++AK + +V +CVSA+EPEL CV AGA+MVELGNFD FYDQG+ FTA+DV+ MT+ TRALLP PLSVT+PH L +++QV LA+ L+ LGVDVIQTEGKYSLDPS GG+QG IERAAP LAA +AI+RAV+IPVM +SG+S+VTA MALAAGA GVGVGSAVNKLN+++ M+AVVRA+A AM LPAP
Sbjct: 12 ASLCGVEGFM----TMSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDPSAGGLQGVIERAAPALAATYAIARAVDIPVMTSSGISEVTASMALAAGASGVGVGSAVNKLNAQVAMIAVVRALAIAMDLPAP 265
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: A0A1Y1HWD8_KLENI (Uncharacterized protein ycf23 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWD8_KLENI) HSP 1 Score: 286 bits (731), Expect = 3.600e-88 Identity = 156/243 (64.20%), Postives = 193/243 (79.42%), Query Frame = 1
Query: 82 APTRMSGDVLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGL 810
AP+R DVL PF K+ KVI+GL F+ + V+++ AA GG TH+DIACDPELV++A ++++VPVCVSAVEPELF VAAGA MVE+GN+D FY +G TF AE+VL +TR+TR LLP++PLSVTVPHTL L +QV LAE LE G D+IQTEG S P+ GV G IE+A+PTLAAA++ISRAV+IPVM ASG+SDVTA MA+AAGA GVGVGSA+NKLNS I M+A RAIA+A+GL
Sbjct: 62 APSRQ--DVLRPFAEKKAFKVIAGLKNFNRENVAEIVAAAEQGGATHVDIACDPELVKLACSLTSVPVCVSAVEPELFVPAVAAGATMVEIGNYDPFYAEGRTFDAEEVLALTRRTRQLLPTIPLSVTVPHTLPLPDQVHLAELLENAGADIIQTEGGVSSAPTQAGVAGMIEKASPTLAAAYSISRAVSIPVMCASGISDVTASMAIAAGAAGVGVGSAINKLNSGIAMIAATRAIANALGL 302
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: U5DGR7_9CHRO (Pyruvate/oxaloacetate carboxyltransferase n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5DGR7_9CHRO) HSP 1 Score: 274 bits (700), Expect = 1.660e-84 Identity = 148/231 (64.07%), Postives = 182/231 (78.79%), Query Frame = 1
Query: 112 APFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
A F +LK+ISGLN F+ D V+ VARAAAAGG T +DIA PELVR A+ ++P+C SAVEPE F A VAAGA+++E+GNFD FY QG F AE+VL +TR TRALLP V LSVTVPH L L+ QV+LAE+L G DVIQTEG S P+ GGV GAIE+AAPTLAAAH ISRAV++PV+ ASGL+DVTAP+A+AAGA G+GVGSAVN+LNS++ MVA VR++ +A+
Sbjct: 8 AAFARRNALKIISGLNNFNGDRVAAVARAAAAGGATFVDIAASPELVRRARQACDLPICTSAVEPEAFVAAVAAGADLIEIGNFDCFYAQGRRFEAEEVLALTRATRALLPQVMLSVTVPHVLPLDAQVQLAEDLVRAGADVIQTEGGTSSQPAHGGVLGAIEKAAPTLAAAHCISRAVDVPVLCASGLTDVTAPLAIAAGAAGIGVGSAVNRLNSKVAMVAAVRSLVAAL 238
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: UPI001882BC92 (DUF561 domain-containing protein n=1 Tax=Cyanobacterium stanieri TaxID=102235 RepID=UPI001882BC92) HSP 1 Score: 273 bits (698), Expect = 3.190e-84 Identity = 148/233 (63.52%), Postives = 183/233 (78.54%), Query Frame = 1
Query: 130 KSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGLPAPKAV 828
K+LKVISGLN FD V V RAA GG T +DIA D E+++ K ++PVCVSAVEP+LF + V AGA+++E+GNFDSFY QG+ F+AEDVL +TR+TRALLP V LSVTVPHTL L+EQV LA++LEA G D+IQTEG S +P+ G+ G IE+A+PTLAAAHAISRAV IPV+ ASGLSDVT PMA+A GA GVGVGSAVNKLN ++ M+AVVR++ A+ A +AV
Sbjct: 14 KALKVISGLNNFDVANVVAVCRAAQLGGATFVDIAADVEIIKAVKESIDLPVCVSAVEPQLFVSAVEAGADLIEIGNFDSFYAQGINFSAEDVLSLTRQTRALLPHVLLSVTVPHTLPLDEQVELAQKLEAEGADIIQTEGGTSSNPNHSGILGLIEKASPTLAAAHAISRAVQIPVLCASGLSDVTVPMAIATGASGVGVGSAVNKLNDQVAMIAVVRSLVEALNRSASQAV 246
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: A0A166CRX2_DAUCS (Uncharacterized protein ycf23 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166CRX2_DAUCS) HSP 1 Score: 275 bits (702), Expect = 6.200e-84 Identity = 144/234 (61.54%), Postives = 190/234 (81.20%), Query Frame = 1
Query: 106 VLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEG-KYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
VL FHA K++K+ISGL FD D V+ V AA GG TH+DIACDP+LV++A +++++P+CVS+V+P FPA + AGA MVE+GN+DSFY++G+TF+ E++L +TR+T+ +LPSV LSVTVPHTL L +Q++LAE+LE GVDVIQTEG KYS P+ G+ G IE+A PTLAAA++ISRAV IPVM +SGLS VTAPMA+ AGA GVGVGSA+NKLN I M+A VR+IA+++
Sbjct: 60 VLKDFHAKKAIKIISGLQNFDKDNVASVVTAADKGGATHVDIACDPDLVKLATSLTSLPICVSSVDPAAFPAAIEAGAVMVEIGNYDSFYEKGVTFSPEEILNLTRETKKILPSVALSVTVPHTLSLPDQIKLAEQLEQEGVDVIQTEGGKYS-SPTKSGILGLIEKATPTLAAAYSISRAVKIPVMCSSGLSAVTAPMAITAGAAGVGVGSAINKLNDVIAMIAEVRSIANSL 292
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: A0A1E5QXG4_9CHRO (Uncharacterized protein n=2 Tax=unclassified Cyanobacterium TaxID=2629879 RepID=A0A1E5QXG4_9CHRO) HSP 1 Score: 272 bits (695), Expect = 8.890e-84 Identity = 144/225 (64.00%), Postives = 178/225 (79.11%), Query Frame = 1
Query: 130 KSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
K+LKVISGLN FD V V +AA GG T +DIA D E+++ K N+PVCVSAVEP+LF + V AGA+++E+GNFDSFY QG+ F+AEDVL +TR+TRALLP++ LSVTVPHTL L+EQV LA+ LEA G D+IQTEG S P+ G+ G IE+A+PTLAAAHAIS+AV IPV+ ASGLSDVT PMA+A GA GVGVGSAVNKLN E+ M+AVVR++ A+
Sbjct: 14 KALKVISGLNNFDLANVKAVCKAAELGGATFVDIAADVEIIKAVKESINIPVCVSAVEPQLFVSAVEAGADLIEIGNFDSFYAQGINFSAEDVLNLTRQTRALLPNILLSVTVPHTLPLHEQVELAQALEAAGADIIQTEGGTSSKPNHSGILGLIEKASPTLAAAHAISKAVQIPVLCASGLSDVTVPMAIATGASGVGVGSAVNKLNDEVAMMAVVRSLVEAL 238
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: L1K0A3_GUITC (Uncharacterized protein ycf23 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K0A3_GUITC) HSP 1 Score: 272 bits (695), Expect = 9.190e-84 Identity = 150/236 (63.56%), Postives = 184/236 (77.97%), Query Frame = 1
Query: 100 GDVLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALL-PSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
GDV+ PF ++LK+ISGLN FD V+ V RAA AGG T +DIACDP+LV++A+++ NVPVCVS+V E F A V AGA MVE+GN+DSFY QG F+AE+VL +T +TR +L S+P+SVTVPHTL L+EQV LA LEA G +IQTEG + PS+GG+QG IE+AAPTLAA AIS+AV IP MAASG+S +TAP+A+AAGA GVGVGSAVNKLNSEI M+A VR I AM
Sbjct: 4 GDVMLPFEQRRALKIISGLNNFDEKSVASVVRAANAGGATLVDIACDPKLVQLARSIGNVPVCVSSVVAEDFLAAVKAGANMVEIGNYDSFYAQGRKFSAEEVLAITERTRDILGSSIPVSVTVPHTLPLDEQVSLALALEAAGASIIQTEGGMPMKPSSGGIQGLIEKAAPTLAATAAISKAVEIPTMAASGISAITAPLAIAAGASGVGVGSAVNKLNSEIAMLAAVREIYEAM 239
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: M1AF41_SOLTU (Uncharacterized protein ycf23 n=16 Tax=Solanaceae TaxID=4070 RepID=M1AF41_SOLTU) HSP 1 Score: 274 bits (700), Expect = 1.080e-83 Identity = 144/235 (61.28%), Postives = 186/235 (79.15%), Query Frame = 1
Query: 106 VLAPFHAGKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAMGL 810
VL FH K+LK+I+GL D + V+ V AA GG TH+DIACDPELV++A +++++PVCVS+V+P FPA V AGA MVE+GN+DSFY++GL F+ E +L +T++T+ LLPSV LSVTVPHTL L +QV+LAE+LE GVD+IQTEG PS GV G IE+A PTLAAA++ISRAVNIPVM +SGLS VTAPMA+ AGA GVGVGSA+NKLN ++ M+A V++IA ++GL
Sbjct: 56 VLKEFHEKKALKIIAGLQNLDKENVASVVTAADKGGATHVDIACDPELVKLAISLTSLPVCVSSVDPAAFPAAVEAGALMVEIGNYDSFYEKGLVFSPEQILNLTKETKRLLPSVVLSVTVPHTLSLPDQVKLAEQLELEGVDIIQTEGGKCSTPSKAGVLGLIEKATPTLAAAYSISRAVNIPVMCSSGLSAVTAPMAIVAGAAGVGVGSAINKLNDQVAMIAEVKSIAHSLGL 290
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Match: UPI001F492C80 (DUF561 domain-containing protein n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F492C80) HSP 1 Score: 271 bits (694), Expect = 1.340e-83 Identity = 143/226 (63.27%), Postives = 183/226 (80.97%), Query Frame = 1
Query: 127 GKSLKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPELVRVAKAVSNVPVCVSAVEPELFPACVAAGAEMVELGNFDSFYDQGLTFTAEDVLEMTRKTRALLPSVPLSVTVPHTLDLNEQVRLAEELEALGVDVIQTEGKYSLDPSTGGVQGAIERAAPTLAAAHAISRAVNIPVMAASGLSDVTAPMALAAGARGVGVGSAVNKLNSEIGMVAVVRAIASAM 804
G++LKVISGLN FD D VS V +AAA GG T +DIA DP+LVR+ K + ++PVCVSAVEPELF CVAAGA+++E+GNFDSFY QG F A +VL +T++TR LLP++ LSVTVPH L+L++QV+LAEEL G D+IQTEG S P+ G G IE+A PTLAAA+ ISRAV+IPV+ ASGLS+VTAP+A+AAGA G+GVGSA+NKL+SE+ M+AVVR++ A+
Sbjct: 14 GRALKVISGLNNFDRDRVSAVVKAAAQGGATFVDIAADPDLVRLVKQLIHLPVCVSAVEPELFVTCVAAGADLIEIGNFDSFYAQGRRFEAPEVLALTQETRRLLPAITLSVTVPHILELDQQVQLAEELVKAGADIIQTEGGTSSTPTHAGTLGLIEKATPTLAAAYEISRAVHIPVLCASGLSNVTAPLAIAAGASGIGVGSAINKLSSEVEMIAVVRSLVEAL 239 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10621.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10621.527.1 >prot_F-distichus_contig10621.527.1 ID=prot_F-distichus_contig10621.527.1|Name=mRNA_F-distichus_contig10621.527.1|organism=Fucus distichus monoicous|type=polypeptide|length=283bp MKSTYFIFATAALSGAESFCFAPTRMSGDVLAPFHAGKSLKVISGLNKFDback to top mRNA from alignment at F-distichus_contig10621:831..4309+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10621.527.1 ID=mRNA_F-distichus_contig10621.527.1|Name=mRNA_F-distichus_contig10621.527.1|organism=Fucus distichus monoicous|type=mRNA|length=3479bp|location=Sequence derived from alignment at F-distichus_contig10621:831..4309+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10621:831..4309+ >mRNA_F-distichus_contig10621.527.1 ID=mRNA_F-distichus_contig10621.527.1|Name=mRNA_F-distichus_contig10621.527.1|organism=Fucus distichus monoicous|type=CDS|length=1698bp|location=Sequence derived from alignment at F-distichus_contig10621:831..4309+ (Fucus distichus monoicous)back to top |