prot_F-distichus_contig9921.19360.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9921.19360.1
Unique Nameprot_F-distichus_contig9921.19360.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length128
Homology
[Close]
BLAST of mRNA_F-distichus_contig9921.19360.1 vs. uniprot
Match: D7G1M2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M2_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 3.250e-23
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = 0 
Query:    1 MTLAAARVALRKIRTDLCSSLGVEGSGGKGNKGDAHLEASLVILSSATASALHLSELLLPVRAMETLLTIDFAEPVRTDASQAERISNDSGIASA---LGLLEGSSLPLVVHDEALHAWLVQQNDRRIED 127
            MTLAA R ALRK+R +L  S   EGSG            S+VIL+SAT +A HL ELLLPVRA+ETLL++DF+ PV+TD    ++++      +A   LGLL G S P+V+  +AL  WLVQ +D + +D
Sbjct:  112 MTLAAGRAALRKLRAELRHSGDGEGSG------------SVVILASATTNAQHLGELLLPVRAIETLLSLDFSRPVKTDVGLGQQLAVGDAAGAAVEGLGLLPGGSSPIVITGDALEDWLVQPDDVKGQD 229
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9921.19360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1M2_ECTSI3.250e-2347.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9921contigF-distichus_contig9921:1860..2557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9921.19360.1mRNA_F-distichus_contig9921.19360.1Fucus distichus monoicousmRNAF-distichus_contig9921 1224..2592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9921.19360.1 ID=prot_F-distichus_contig9921.19360.1|Name=mRNA_F-distichus_contig9921.19360.1|organism=Fucus distichus monoicous|type=polypeptide|length=128bp
MTLAAARVALRKIRTDLCSSLGVEGSGGKGNKGDAHLEASLVILSSATAS
ALHLSELLLPVRAMETLLTIDFAEPVRTDASQAERISNDSGIASALGLLE
GSSLPLVVHDEALHAWLVQQNDRRIED*
back to top