prot_F-distichus_contig98826.19323.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig98826.19323.1
Unique Nameprot_F-distichus_contig98826.19323.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length104
Homology
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: A0A067CU13_SAPPC (Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU13_SAPPC)

HSP 1 Score: 191 bits (484), Expect = 2.820e-61
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIKDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 191 bits (484), Expect = 2.820e-61
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 190 bits (483), Expect = 4.010e-61
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVI DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: A0A0B2PRP2_GLYSO (Histone H4 n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=A0A0B2PRP2_GLYSO)

HSP 1 Score: 190 bits (483), Expect = 4.010e-61
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVL +FLENVICD VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLMIFLENVICDVVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: A0A0K9NRA2_ZOSMR (Histone H4 n=4 Tax=Mesangiospermae TaxID=1437183 RepID=A0A0K9NRA2_ZOSMR)

HSP 1 Score: 190 bits (483), Expect = 4.010e-61
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVI DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIGDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 191 bits (484), Expect = 5.700e-61
Identity = 101/103 (98.06%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   23 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: B7FX68_PHATC (Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FX68_PHATC)

HSP 1 Score: 189 bits (481), Expect = 8.100e-61
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI DSVTYTEHARRKTVTAMDVVYALKRQG+TLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGKTLYGFGG 103
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: C1MUM2_MICPC (Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1MUM2_MICPC)

HSP 1 Score: 189 bits (481), Expect = 8.100e-61
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI D+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 189 bits (481), Expect = 8.100e-61
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            M+GRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Match: A0A7S3RVL2_9SPIT (Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3RVL2_9SPIT)

HSP 1 Score: 189 bits (481), Expect = 8.360e-61
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0 
Query:    1 MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKG GKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI D+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98826.19323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067CU13_SAPPC2.820e-6198.06Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepI... [more]
A0A024G0M5_9STRA2.820e-6198.06Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI... [more]
H4_SOLLC4.010e-6197.09Histone H4 n=13 Tax=cellular organisms TaxID=13156... [more]
A0A0B2PRP2_GLYSO4.010e-6196.12Histone H4 n=2 Tax=Glycine subgen. Soja TaxID=1462... [more]
A0A0K9NRA2_ZOSMR4.010e-6197.09Histone H4 n=4 Tax=Mesangiospermae TaxID=1437183 R... [more]
A0A3L6V663_9STRA5.700e-6198.06Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
B7FX68_PHATC8.100e-6197.09Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 Rep... [more]
C1MUM2_MICPC8.100e-6197.09Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1M... [more]
F0W2L9_9STRA8.100e-6197.09Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A7S3RVL2_9SPIT8.360e-6197.09Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 Re... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 89..100
score: 97.79
coord: 62..76
score: 85.29
coord: 5..16
score: 88.73
coord: 77..89
score: 90.05
coord: 20..39
score: 93.38
coord: 40..60
score: 93.56
IPR001951Histone H4SMARTSM00417h44coord: 16..90
e-value: 2.6E-28
score: 110.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..103
e-value: 1.1E-59
score: 200.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..102
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 36..96
e-value: 5.0E-8
score: 33.0
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 1..103
NoneNo IPR availablePANTHERPTHR10484:SF171coord: 1..103
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 89..100
score: 97.79
coord: 62..76
score: 85.29
coord: 5..16
score: 88.73
coord: 77..89
score: 90.05
coord: 20..39
score: 93.38
coord: 40..60
score: 93.56
IPR001951Histone H4SMARTSM00417h44coord: 16..90
e-value: 2.6E-28
score: 110.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..103
e-value: 1.1E-59
score: 200.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..102
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 36..96
e-value: 5.0E-8
score: 33.0
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 1..103
NoneNo IPR availablePANTHERPTHR10484:SF171coord: 1..103
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98826contigF-distichus_contig98826:721..1032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98826.19323.1mRNA_F-distichus_contig98826.19323.1Fucus distichus monoicousmRNAF-distichus_contig98826 721..1032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig98826.19323.1 ID=prot_F-distichus_contig98826.19323.1|Name=mRNA_F-distichus_contig98826.19323.1|organism=Fucus distichus monoicous|type=polypeptide|length=104bp
MSGRGKGGKGWGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL
IYEETRGVLKVFLENVICDSVTYTEHARRKTVTAMDVVYALKRQGRTLYG
FGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR009072Histone-fold
IPR035425CENP-T/H4_C
IPR019809Histone_H4_CS