prot_F-distichus_contig98227.19261.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig98227.19261.1
Unique Nameprot_F-distichus_contig98227.19261.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length86
Homology
BLAST of mRNA_F-distichus_contig98227.19261.1 vs. uniprot
Match: R7VJB2_CAPTE (RING-type domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VJB2_CAPTE)

HSP 1 Score: 56.2 bits (134), Expect = 2.890e-7
Identity = 27/78 (34.62%), Postives = 39/78 (50.00%), Query Frame = 0
Query:    8 REQKVASKEATLSLMESRSMVLVCKVCMENDCNIVTLPCMHIAMCKTCFDSHTADSSVLHFCPMCRANIHSSSHVYFA 85
            +E  +   ++ L   E      +CKVCM+NDCN+V LPC H+  C  C       +  L  CP+CR  I  +  VY +
Sbjct:  360 QENSIEEMQSLLQENEXMXXQKICKVCMDNDCNVVFLPCGHLVCCTNC-------APALRHCPICRTLIKGTVRVYLS 430          
BLAST of mRNA_F-distichus_contig98227.19261.1 vs. uniprot
Match: C3XQ28_BRAFL (RING-type domain-containing protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XQ28_BRAFL)

HSP 1 Score: 55.1 bits (131), Expect = 7.520e-7
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 0
Query:    7 SREQKVASKEATLSLMESRSMVLVCKVCMENDCNIVTLPCMHIAMCKTCFDSHTADSSVLHFCPMCRANIHSSSHVYFA 85
            SR++ V ++E+ L  +    M   CK+CME +  IV +PC H A+C+ C       S+ L  CPMCR NI  +   Y +
Sbjct:  477 SRQETVPTQESELERLREERM---CKICMEEEMEIVFVPCGHFAVCQNC-------SASLRCCPMCRKNIDGTVRAYMS 545          
BLAST of mRNA_F-distichus_contig98227.19261.1 vs. uniprot
Match: A0A8J9VZD2_BRALA (BIRC2 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VZD2_BRALA)

HSP 1 Score: 54.3 bits (129), Expect = 1.410e-6
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 0
Query:    2 SNDILSREQKVASKEATLSLMESRSMVLVCKVCMENDCNIVTLPCMHIAMCKTCFDSHTADSSVLHFCPMCRANIHSSSHVYFA 85
            S+ + S+++ V S+E+ +  ++   +   CK+CME +  IV +PC H A+C+ C       S+ LH CP+CR +I  +   Y A
Sbjct:  495 SSSLESQQETVPSEESEVERLKEERL---CKICMEEETEIVFVPCGHFAVCQNC-------SASLHCCPICRKDIDRTVRTYMA 568          
BLAST of mRNA_F-distichus_contig98227.19261.1 vs. uniprot
Match: A0A6J8BK55_MYTCO (RING-type domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BK55_MYTCO)

HSP 1 Score: 53.9 bits (128), Expect = 1.870e-6
Identity = 25/56 (44.64%), Postives = 34/56 (60.71%), Query Frame = 0
Query:   30 VCKVCMENDCNIVTLPCMHIAMCKTCFDSHTADSSVLHFCPMCRANIHSSSHVYFA 85
            +CKVC +N   ++ LPCMH+  CK C D     ++V H CP+CR  I  S  +YFA
Sbjct:  355 LCKVCFDNQVEVIFLPCMHVCWCKNCSDK----TNVKH-CPICREKIKESRPLYFA 405          
BLAST of mRNA_F-distichus_contig98227.19261.1 vs. uniprot
Match: A0A369SCX3_9METZ (Baculoviral IAP repeat-containing protein 8 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SCX3_9METZ)

HSP 1 Score: 50.8 bits (120), Expect = 2.050e-5
Identity = 28/85 (32.94%), Postives = 45/85 (52.94%), Query Frame = 0
Query:    3 NDILSREQKVASKEATL----SLMESRSMVLVCKVCMENDCNIVTLPCMHIAMCKTCFDSHTADSSVLHFCPMCRANIHSSSHVY 83
            +D+  R +++ S  + L    +L+E +  + +CKVC EN+  IV +PC H+  C +C +        L  CP CRA I +   VY
Sbjct:  202 DDVDLRSERIGSGGSMLREKIALLEDKLELTMCKVCFENELEIVLIPCKHMVTCTSCAEQ-------LIICPTCRAPIIARDRVY 279          
BLAST of mRNA_F-distichus_contig98227.19261.1 vs. uniprot
Match: UPI001EB094A3 (baculoviral IAP repeat-containing protein 7-like n=3 Tax=Haliotis TaxID=6452 RepID=UPI001EB094A3)

HSP 1 Score: 50.8 bits (120), Expect = 2.360e-5
Identity = 27/76 (35.53%), Postives = 40/76 (52.63%), Query Frame = 0
Query:   13 ASKEATLSLMESRSMVLV---CKVCMENDCNIVTLPCMHIAMCKTCFDSHTADSSVLHFCPMCRANIHSSSHVYFA 85
            +S E + SLME    +     CK+CM+ + N+V LPC H+  C TC       +  L  CP+CRANI  +   + +
Sbjct:  552 SSDEDSQSLMEENRQLKEQRQCKICMDEEVNVVFLPCGHLVCCATC-------APALRKCPICRANIRGTVRTFMS 620          
BLAST of mRNA_F-distichus_contig98227.19261.1 vs. uniprot
Match: A0A6J3C432_GALME (baculoviral IAP repeat-containing protein 7-B isoform X1 n=3 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J3C432_GALME)

HSP 1 Score: 50.1 bits (118), Expect = 4.280e-5
Identity = 24/72 (33.33%), Postives = 40/72 (55.56%), Query Frame = 0
Query:   14 SKEATLSLMESRSMVLVCKVCMENDCNIVTLPCMHIAMCKTCFDSHTADSSVLHFCPMCRANIHSSSHVYFA 85
            S  + + L ++R +   CKVC E++CN+V +PC H+  C  C  S          CP+CR +I ++  +YF+
Sbjct:  355 SSNSNIELEDTRKL---CKVCYEDECNVVIVPCGHVCACAKCVLSTDR-------CPICRGSIDNTLRLYFS 416          
BLAST of mRNA_F-distichus_contig98227.19261.1 vs. uniprot
Match: H8ZQB9_REICL (Apoptosis inhibitor 2 (Fragment) n=1 Tax=Reishia clavigera TaxID=272940 RepID=H8ZQB9_REICL)

HSP 1 Score: 48.1 bits (113), Expect = 5.840e-5
Identity = 21/55 (38.18%), Postives = 29/55 (52.73%), Query Frame = 0
Query:   31 CKVCMENDCNIVTLPCMHIAMCKTCFDSHTADSSVLHFCPMCRANIHSSSHVYFA 85
            CK+CMEN+  ++  PC H   C +C    T+       CP+CR  IHS   V+ A
Sbjct:   85 CKICMENEVEVIFYPCRHFVCCASCGSGITS-------CPICRVPIHSRDKVFMA 132          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98227.19261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
R7VJB2_CAPTE2.890e-734.62RING-type domain-containing protein n=1 Tax=Capite... [more]
C3XQ28_BRAFL7.520e-736.71RING-type domain-containing protein n=2 Tax=Branch... [more]
A0A8J9VZD2_BRALA1.410e-633.33BIRC2 protein n=1 Tax=Branchiostoma lanceolatum Ta... [more]
A0A6J8BK55_MYTCO1.870e-644.64RING-type domain-containing protein n=1 Tax=Mytilu... [more]
A0A369SCX3_9METZ2.050e-532.94Baculoviral IAP repeat-containing protein 8 n=1 Ta... [more]
UPI001EB094A32.360e-535.53baculoviral IAP repeat-containing protein 7-like n... [more]
A0A6J3C432_GALME4.280e-533.33baculoviral IAP repeat-containing protein 7-B isof... [more]
H8ZQB9_REICL5.840e-538.18Apoptosis inhibitor 2 (Fragment) n=1 Tax=Reishia c... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 31..72
e-value: 1.6E-4
score: 31.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 31..73
score: 10.704
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 30..78
e-value: 1.8E-10
score: 40.5
NoneNo IPR availablePANTHERPTHR12183UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEINcoord: 11..83
NoneNo IPR availablePANTHERPTHR12183:SF32MITOCHONDRIAL E3 UBIQUITIN PROTEIN LIGASE 1coord: 11..83
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 30..78
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..85
e-value: 1.3E-14
score: 55.4

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 31..72
e-value: 1.6E-4
score: 31.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 31..73
score: 10.704
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 30..78
e-value: 1.8E-10
score: 40.5
NoneNo IPR availablePANTHERPTHR12183UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEINcoord: 11..83
NoneNo IPR availablePANTHERPTHR12183:SF32MITOCHONDRIAL E3 UBIQUITIN PROTEIN LIGASE 1coord: 11..83
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 30..78
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..85
e-value: 1.3E-14
score: 55.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98227contigF-distichus_contig98227:1798..2055 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98227.19261.1mRNA_F-distichus_contig98227.19261.1Fucus distichus monoicousmRNAF-distichus_contig98227 1798..2055 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig98227.19261.1 ID=prot_F-distichus_contig98227.19261.1|Name=mRNA_F-distichus_contig98227.19261.1|organism=Fucus distichus monoicous|type=polypeptide|length=86bp
FSNDILSREQKVASKEATLSLMESRSMVLVCKVCMENDCNIVTLPCMHIA
MCKTCFDSHTADSSVLHFCPMCRANIHSSSHVYFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD