prot_F-distichus_contig9807.19243.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9807.19243.1
Unique Nameprot_F-distichus_contig9807.19243.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length234
Homology
BLAST of mRNA_F-distichus_contig9807.19243.1 vs. uniprot
Match: D7FYP3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP3_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 1.350e-57
Identity = 114/248 (45.97%), Postives = 140/248 (56.45%), Query Frame = 0
Query:    1 RVSCLRNDLIARGFRPGVILGGDLNSTPSGPVRYLLGELVGPDSDLWRNVDAFRWGDRFFEECSAPKSTAPHQAQVTGDDLEVNSIVSATSLVPPGDDHALRNGSGQGS-----SSKDTHASRRPFLPEVPYLRLQLGLELASGFPAFTNFTPEFTETLDYVFIGGDGGGGGDRTGANGGASGLETPVIVVDKGARGETEV------------VAPMPEEAMLRAMTPGIPAETFPSDHVSLVVDLSV 231
            R+S +R DL+ARG RP VILGGDLNS P GPVRYL+G+L+GPDSDLW N+  F+WGDRFF+E                            S   P  ++A  N   + +     S   + A   PFLP VPYLR    L+LASG PAFTNFTP+FT+TLDYVFI        +  GA+ G        ++  +GA                  VAPMPEE  LRA TPG+P+ETFPSDHVSLVVDL++
Sbjct:  478 RISRVRKDLLARGLRPAVILGGDLNSPPDGPVRYLMGDLIGPDSDLWENMGTFKWGDRFFDELPTTSGXXXXXXXXXXXXXXSRIPDEKASTASPRPNNATNNNDNETARASHPSVAGSKAKPSPFLPNVPYLRTPFDLQLASGTPAFTNFTPDFTDTLDYVFI--------EGAGADSGTPTTAAEAVLAVEGAXXXXXXXXXXXXXXXXXXVAPMPEEGPLRATTPGLPSETFPSDHVSLVVDLAL 717          
BLAST of mRNA_F-distichus_contig9807.19243.1 vs. uniprot
Match: A0A6H5JRV9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV9_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 3.370e-42
Identity = 88/177 (49.72%), Postives = 104/177 (58.76%), Query Frame = 0
Query:    1 RVSCLRNDLIARGFRPGVILGGDLNSTPSGPVRYLLGELVGPDSDLWRNVDAFRWGDRFFEECSAPKSTAPHQAQVTGDDLEVNSIV--SATSLVPPGDDHALRNGSGQGS-----SSKDTHASRRPFLPEVPYLRLQLGLELASGFPAFTNFTPEFTETLDYVFIGGDGGGGGDRT 170
            R+S +R DL+ARG RP V+LGGDLNSTP GPVRYL+G+L+GPDSDLW NV  F+WGDRFF+E                      S +     S   P  ++A  N   + +     S   + A   PFL  VP LR  L L+LASG PAFTNFTPEFTETLDYVFI G G   G  T
Sbjct:  648 RISRVRKDLLARGLRPAVVLGGDLNSTPGGPVRYLMGDLIGPDSDLWENVGTFKWGDRFFDELPTTSGAXXXXXXXXXXXXSPTSRIPDGKASTASPRPNNATNNNDNETTRASHHSVAGSKAKPSPFLRNVPCLRTPLDLQLASGTPAFTNFTPEFTETLDYVFIEGAGADNGAPT 824          
BLAST of mRNA_F-distichus_contig9807.19243.1 vs. uniprot
Match: A0A836CIF3_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.240e-20
Identity = 70/234 (29.91%), Postives = 100/234 (42.74%), Query Frame = 0
Query:    2 VSCLRNDLIARGFRPGVILGGDLNSTPSGPVRYLLGELVGPDSDLWRNVDAFRWGDRFFEECSAPKSTAPHQAQVTGDDLEVNSIVSATSLVPPGDDHALRNGSGQGSSSKDTHASRRPFLPE------VPYLRLQLGLELASGFPAFTNFTPEFTETLDYVFIGGDGGGGGDRTGANGGASGLETPVIVVDKGARGETEVVAPMPEEAMLRAMTPGIPAETFPSDHVSLVVDL 229
            V  +R  L++ G   GV++ GD+NSTP   +RYL G+ +  +  +WR+V AFRWG+R+F+  SA    A      +                                              E      +P + L L L  ASG+P +TNFTP FT+TLDY+F                     +T           E    AP+P EA LRA+T G+P   +PSDHV++V D+
Sbjct:  562 VQGIRERLLSEGQEVGVVVCGDMNSTPLTAIRYLEGDTLSAEHAVWRHVRAFRWGERYFK--SAKAKVAAEDGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGPVSAIPTVALPLPLTNASGYPPYTNFTPAFTDTLDYIFA--------------------DTDSF--------EAVSSAPVPPEAELRAITVGLPYRGYPSDHVAVVADI 765          
BLAST of mRNA_F-distichus_contig9807.19243.1 vs. uniprot
Match: K8YU24_NANGC (2-phosphodiesterase 12-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YU24_NANGC)

HSP 1 Score: 75.5 bits (184), Expect = 2.510e-12
Identity = 73/248 (29.44%), Postives = 100/248 (40.32%), Query Frame = 0
Query:   13 GFRPGVILGGDLNSTPS-GPVRYLLGELVGPDSDLWRNVDAFRWGDRFFE-ECSAPKSTAPHQAQVTGDDLEVNSIVSATSLVPPGDDHALRNGSGQGSSSKDTHASRRPFLPEV-------------------------PYLRLQLGLELASGFPAFTNFTPEFTETLDYVFIGGDGGGGGDRTGANGGASGLETPVIVVDKGARGETEVVAPMP--EEAMLRAMTPGIPAETFPSDHVSLVVDLSV 231
            G RP ++L GDLNSTP+   +RYL GE +GP+ ++W ++  F WG R  E E       A   A +  ++ +             GD  A+    G+ S  ++T  S R   P V                         P L L      A G P FTN+   F ETLDY+F+                    E PV +   GA      V  MP  EEA        +P+   PSDHVS++ D+ V
Sbjct:  127 GVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKKGG-------EEGGDGKAVAVDDGRESRGRETLLSSRA-TPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLE------------------SEAPVPLDPSGASFSVLSVGAMPTREEA---GQDTALPSWQAPSDHVSILCDVRV 345          
BLAST of mRNA_F-distichus_contig9807.19243.1 vs. uniprot
Match: W7T5B9_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5B9_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.600e-12
Identity = 73/248 (29.44%), Postives = 100/248 (40.32%), Query Frame = 0
Query:   13 GFRPGVILGGDLNSTPS-GPVRYLLGELVGPDSDLWRNVDAFRWGDRFFE-ECSAPKSTAPHQAQVTGDDLEVNSIVSATSLVPPGDDHALRNGSGQGSSSKDTHASRRPFLPEV-------------------------PYLRLQLGLELASGFPAFTNFTPEFTETLDYVFIGGDGGGGGDRTGANGGASGLETPVIVVDKGARGETEVVAPMP--EEAMLRAMTPGIPAETFPSDHVSLVVDLSV 231
            G RP ++L GDLNSTP+   +RYL GE +GP+ ++W ++  F WG R  E E       A   A +  ++ +             GD  A+    G+ S  ++T  S R   P V                         P L L      A G P FTN+   F ETLDY+F+                    E PV +   GA      V  MP  EEA        +P+   PSDHVS++ D+ V
Sbjct:   59 GVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKKGG-------EEGGDGKAVAVDVGRESRGRETLLSSRA-TPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLE------------------SEAPVPLDPSGASFSVLSVGAMPTREEA---GQDTALPSWQTPSDHVSILCDVRV 277          
BLAST of mRNA_F-distichus_contig9807.19243.1 vs. uniprot
Match: W7TNA6_9STRA (Endonuclease/exonuclease/phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.870e-12
Identity = 73/248 (29.44%), Postives = 100/248 (40.32%), Query Frame = 0
Query:   13 GFRPGVILGGDLNSTPS-GPVRYLLGELVGPDSDLWRNVDAFRWGDRFFE-ECSAPKSTAPHQAQVTGDDLEVNSIVSATSLVPPGDDHALRNGSGQGSSSKDTHASRRPFLPEV-------------------------PYLRLQLGLELASGFPAFTNFTPEFTETLDYVFIGGDGGGGGDRTGANGGASGLETPVIVVDKGARGETEVVAPMP--EEAMLRAMTPGIPAETFPSDHVSLVVDLSV 231
            G RP ++L GDLNSTP+   +RYL GE +GP+ ++W ++  F WG R  E E       A   A +  ++ +             GD  A+    G+ S  ++T  S R   P V                         P L L      A G P FTN+   F ETLDY+F+                    E PV +   GA      V  MP  EEA        +P+   PSDHVS++ D+ V
Sbjct:  100 GVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKKGG-------EEGGDGKAVAVDVGRESRGRETLLSSRA-TPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLE------------------SEAPVPLDPSGASFSVLSVGAMPTREEA---GQDTALPSWQTPSDHVSILCDVRV 318          
BLAST of mRNA_F-distichus_contig9807.19243.1 vs. uniprot
Match: A0A026WF76_OOCBI (2',5'-phosphodiesterase n=2 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WF76_OOCBI)

HSP 1 Score: 54.3 bits (129), Expect = 6.310e-5
Identity = 35/104 (33.65%), Postives = 47/104 (45.19%), Query Frame = 0
Query:  128 LRLQLGLELASGFPAFTNFTPEFTETLDYVFIGGDGGGGGDRTGANGGASGLETPVIVVDKGARGETEVVAPMPEEAMLRAMTPGIPAETFPSDHVSLVVDLSV 231
            L   L +  A G P +TN+TPEF++ LDY+F   D                            + E E V PMP +  L   T G+P+  FPSDH+SL  DL +
Sbjct:  528 LTQDLRMSSACGTPEYTNYTPEFSDCLDYIFYEKD----------------------------KFEVEQVVPMPSKEELTLHT-GLPSVVFPSDHISLCADLKL 602          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9807.19243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FYP3_ECTSI1.350e-5745.97Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JRV9_9PHAE3.370e-4249.72Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A836CIF3_9STRA2.240e-2029.91Endonuclease/exonuclease/phosphatase n=1 Tax=Tribo... [more]
K8YU24_NANGC2.510e-1229.442-phosphodiesterase 12-like protein n=1 Tax=Nannoc... [more]
W7T5B9_9STRA2.600e-1229.44Endonuclease/exonuclease/phosphatase n=1 Tax=Nanno... [more]
W7TNA6_9STRA3.870e-1229.44Endonuclease/exonuclease/phosphatase n=2 Tax=Monod... [more]
A0A026WF76_OOCBI6.310e-533.652',5'-phosphodiesterase n=2 Tax=Ooceraea biroi Tax... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12121:SF372',5'-PHOSPHODIESTERASE 12coord: 11..230
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 11..230
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 16..229

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12121:SF372',5'-PHOSPHODIESTERASE 12coord: 11..230
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 11..230
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 16..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9807contigF-distichus_contig9807:211..1487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9807.19243.1mRNA_F-distichus_contig9807.19243.1Fucus distichus monoicousmRNAF-distichus_contig9807 211..1487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9807.19243.1 ID=prot_F-distichus_contig9807.19243.1|Name=mRNA_F-distichus_contig9807.19243.1|organism=Fucus distichus monoicous|type=polypeptide|length=234bp
RVSCLRNDLIARGFRPGVILGGDLNSTPSGPVRYLLGELVGPDSDLWRNV
DAFRWGDRFFEECSAPKSTAPHQAQVTGDDLEVNSIVSATSLVPPGDDHA
LRNGSGQGSSSKDTHASRRPFLPEVPYLRLQLGLELASGFPAFTNFTPEF
TETLDYVFIGGDGGGGGDRTGANGGASGLETPVIVVDKGARGETEVVAPM
PEEAMLRAMTPGIPAETFPSDHVSLVVDLSVLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf