prot_F-distichus_contig97832.19227.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig97832.19227.1
Unique Nameprot_F-distichus_contig97832.19227.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length412
Homology
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 3.170e-65
Identity = 149/478 (31.17%), Postives = 229/478 (47.91%), Query Frame = 0
Query:   13 PKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVTQGFWQVEGVHYTEKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERIYIEIP---------------------------------------------------------------------------EEFQEFLGAL------KDMGDAEYYTGCHITRNRKARELKFDQCLYVESMVKIFDVKKEAKILAASGVPTLSNADEPRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTKPLDVQKFCKPAKFILN 409
            P+ +  + +K  +  K  +DGK+EK+K RLV +GF Q+  V Y    SP PS+ASI+++LA A  K  +L H D +QAF  A +DE +++ +P                                                                           ++ +E L +L      KD+G+  ++ GC + R+ +A  L+  Q  Y++S+V  FDV+  + I A+ GV      D+    E       +P REA+G +MW +T +RPDI+ AVRAVAR    P   H K ++KI   L  T++ GITY  +G GL +  Y D+ + A  + RRSVSG    +    IS  S+ Q + +  ++EAEY A  E VK+ L V R V  F+ P     ++ V EDN+GA+ L  N  +S RSKHIDV +  +R    +  + + +V + +QHAD+LTK L         + ++N
Sbjct:   39 PEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGE-------WPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYE-RGSGLGLAVYVDASY-ADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFV-RAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMN 506          
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A5AHF5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AHF5_VITVI)

HSP 1 Score: 222 bits (565), Expect = 6.580e-64
Identity = 144/426 (33.80%), Postives = 219/426 (51.41%), Query Frame = 0
Query:    1 MVENCVYNQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVTQGFWQVEGVHYTEKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERIYIEIPE-------EFQEFLGA---LKDMGDAEYYTGCHITRNRKARELKFDQCLYVESMVKIFDVKKEAKILAASGVPTLSNADE------PRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTKPLDVQKFCKPAKFILNV 410
            +  N V++ +  P     +G K ++K K    G +E+YK RLV +GF Q EG+ Y + +SP     S+R+++   A  D EL  +D + AFL  N+DE IY+E PE       E +E+L     + DMG+A Y  G  I R+R    L   Q  Y++ +++ F+++       +SG+  +   D+      PRN  E+E+MK  PY  AVG LM+  T TRPDI+  V    R+  +PG  H K   K+ R L  TK++ +TY  +   L +  Y+DSD+G CLD+ +S SG V MLA  AISW S  Q +TA  T EAE+ A  E     L +   +            + ++ DN  A+  + N   S  SKH+D+ + +V++    Q+V +  +R+     D LTK L       P  ++ NV
Sbjct:   70 IAHNDVWDLIELPNSCKPVGCKWIFKTKRDAKGNIERYKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMTLVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGDLGLLHETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDWVLERFNMQS-----CSSGIAPILKGDKLSKMQCPRNNMEREQMKKIPYASAVGSLMYAQTCTRPDISFVVGMFGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLRNFISGLGVVDSIAKPLRIYCDNTAAVFFSKNGKFSSGSKHMDLKYLVVKERVQKQQVSIENIRTTLMVGDPLTKGLP------PKAYLENV 483          
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA)

HSP 1 Score: 220 bits (560), Expect = 3.340e-62
Identity = 153/487 (31.42%), Postives = 228/487 (46.82%), Query Frame = 0
Query:    1 MVENCVYNQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVTQGFWQVEGVHYTEKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERIYIEIPEEFQEFLGA------------------------------------------------------------------------------------------LKDMGDAEYYTGCHITRNRKARELKFDQCLYVESMVKIFDVKKEAKILAA--SGVPTLSNADEPRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTKPL 395
            ++ N  +  V +P  +  IG + ++  K  + G+V +YK RLV +G+ Q  G+ Y E YSP     S+R +LA   A+  E+   D + AFL   ++E IY+E+PE  +E L                                                                                            +KD+G A +  G  I  + + R L   Q  Y ES++K F  +     L     GV  L+ ADEP+  E+K +MK  PYR  VG LM+ A  TRPDI+ AV  ++RF ENPG  H    +K+ R LL TK+ GI Y G   G   EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++EAEY ALS+ VK+ + + R ++E    + +VGA  ++EDN+GA+ LA N     R+KHID+ +  +R+   + +V + YV +++Q A  +TK L
Sbjct:   92 LIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRGEGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEI--GAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLAYFMTKGL 574          
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 2.100e-61
Identity = 130/335 (38.81%), Postives = 190/335 (56.72%), Query Frame = 0
Query:   57 EKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERIYIEIPE-------------------EFQEFLGAL---KDMGDAEYYTGCHITRNRKARELKFDQCLYVESMVKIFDVKKEAKILAASGVPTLSNADEPRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVR 368
            E Y+PT + +S+R+L A A  ++  LRH D +QAF+++++DE +++ +PE                   +F   L  +   K++GD  +Y+GC   R+  A  LK  Q  Y E +   F V+   +I    G+  LS  D      + EE+  +P+RE +G LMW AT TRPDIA AVRAVAR+C +P   H +  + I   ++ T E GIT+  G   GL ME + D+D+ +    RRSVSG ++M     ISW SR Q+     T+EAEY +L++V+K+VL  LRQV  FM P   +  + VFEDN+GAI+LA N  ++  SKHI V H  +R
Sbjct:   10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGILGYVVRTSELGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLF-LRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIHVRHHFIR 336          
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 4.350e-61
Identity = 140/437 (32.04%), Postives = 212/437 (48.51%), Query Frame = 0
Query:   57 EKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERIYIEIPEEFQEFLGAL---------------------------------------------------------------------------------KDMGDAEYYTGCHITRNRKARELKFDQCLYVESMVKIFDVKKEAKILAASGVPTLSNADEPRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTKPLDVQKFCKPAKFILNVE 411
            E Y+PT + +S+R+L A A  ++  LRH D +QAF+++++DE +++ +PE      G +                                                                                 K++GD  +Y+GC   R+  A  LK  Q  Y E +   F V+   +I    G+  LS  D      + EE+  +P+RE +G LMW AT TRPDIA AVRAVAR+C +P   H +  + I   ++ T + GIT+  G   GL ME + D+D+ +    RRSVSG ++M     ISW SR Q+     T+EAEY +L++V+K+VL  LRQV  FM P   +  + VFEDN+GAI+LA N  ++  SKHIDV H  +R+    +++ + +V S  QHAD LTK L    F     ++++++
Sbjct:   10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLF-LRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSMD 438          
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.520e-60
Identity = 120/297 (40.40%), Postives = 173/297 (58.25%), Query Frame = 0
Query:  115 LKDMGDAEYYTGCHITRNRKARELKFDQCLYVESMVKIFDVKKEAKILAASGVPTLSNADEPRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTKPLDVQKFCKPAKFILNV 410
            +K++GD  +Y+GC   R+  AR LK  Q  Y + +   F V+   +IL   G+  LS  D      + EE+  +P+RE +G LMW AT TRP+IA A RAVAR+C +P   H +  + I   ++ T + GIT+G G   GL ME + D+D+ +    RRSVSG  +M  +  ISW SR Q+     T+EAEY +L++V+K+VL  LRQV  FM P   +  + VFEDN+GAI+LA N  ++  SKH DV H  + +    +++ + YV S  QHAD LTK L    F     F+++V
Sbjct:    4 VKNLGDLRWYSGCVYERDWDARILKISQQTYAQELGMDFGVEYGKEILFPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLF-LRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKALHFGDFEFHRNFVMSV 292          
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A0A6H5KBD2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD2_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 4.700e-60
Identity = 129/347 (37.18%), Postives = 190/347 (54.76%), Query Frame = 0
Query:   53 VHYTEKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERIYIEIPEEFQEFLGAL------KDMGDAEYYTGCHITRNRKARELKFDQCLYVESMVKIFDVKKEAKILAASGVPTLSNADEPRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTK 393
            V+  E Y+PT + +S+ +L A A  ++  LRH D +QAF+++++DE +++ +PE    F+  L      K++GD  +Y+GC   R+  A  LK  Q  Y E +   F V+   +I    G+  LS  D      + EE+  +P+RE +G LMW AT TRPDIA           N G  +                W +  GG   GL ME + D+D+ +    RRSVSG ++M     ISW SR Q+     T+EAEYF+L++V+K+VL  LRQV  FM P   +  + VFEDN+GAI+LA N  ++  SKHIDV H  +R+    +++ + +V S  QHAD LTK
Sbjct:    6 VNCGETYAPTVAVSSVSLLAAMACEQNLSLRHFDIKQAFVQSDLDEHVFMRLPEGCGRFVRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIA-----------NAGMRYGLVT------------WVLHSGGVVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVKLSTTEAEYFSLADVMKEVLF-LRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTK 321          
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A0A438FEW0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FEW0_VITVI)

HSP 1 Score: 221 bits (562), Expect = 5.610e-60
Identity = 157/484 (32.44%), Postives = 232/484 (47.93%), Query Frame = 0
Query:    3 ENCVYNQVARPKDKLVIGTKMLYKRKIGQDG-KVEKYKCRLVTQGFWQVEGVHYTEKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERIYIEIPEEF--------------------------------------------------------------------------------QEFLGA---LKDMGDAEYYTGCHITRNRKARELKFDQCLYVESMVKIFDVKKEAKILAASGVP-TLSNADEPRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYGGQG-CGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTKPLDVQKF 400
            +N  +  V +PKD+ V+G+K ++KRK G  G +  +YK RLV +GF Q EGV Y E +SP    +SIR+LLA  A +D EL  LD + AFL   +DE IY++ PE F                                                                                +E L A   +KD+G A+   G  I R+R  R L+  Q  Y+  ++  F++     +    G    LS    P   EEK  M+  PY   VG +M+T   +RPD+A AV  ++R+   PG  H + V  +F+ L  T+  G+ YGG       ++ + D+D+   +DTR+S++G V  +   A+SW + +Q V A  T+EAEY A++E VK+ +  L+ + E  E +M  G V V+ DN+ AI LA N+    RSKHIDV    VRD   A ++ V  V ++D  +D+LTK L+V KF
Sbjct:  763 KNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKHSSIRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPEGFGEGIKDGQVCLLKKSLYGLKQSPRQWYKRFDKYMLDIGFNPSSHDGCVYFKLTEDSMVYLLLYVDDMLVACKEKRHLEQVKEMLKAEFEMKDLGSAKRILGMEIERDRSKRVLRLSQNSYISKVLSRFEMNNVKTVSTPLGQHFRLSITQAPETHEEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRYMSCPGKPHWQAVKWLFQYLAGTRSLGLVYGGNSQLETQLQGFVDADYAGNIDTRKSLTGYVFTVFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIW-LKGITE--ELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKF 1243          
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 1.840e-59
Identity = 140/437 (32.04%), Postives = 212/437 (48.51%), Query Frame = 0
Query:   57 EKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERIYIEIPEEFQEFLGAL---------------------------------------------------------------------------------KDMGDAEYYTGCHITRNRKARELKFDQCLYVESMVKIFDVKKEAKILAASGVPTLSNADEPRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTKPLDVQKFCKPAKFILNVE 411
            E Y+PT + +S+R+L A A  ++  LRH D +QAF+++++DE +++ +PE      G +                                                                                 K++GD  +Y+GC   R+  A  LK  Q  Y E +   F V+   +I    G+  LS  D      + EE+  +P+RE +G LMW AT TRPDIA AVRAVAR+C +P   H +  + I   ++ T + GIT+  G   GL ME + D+D+ +    RRSVSG ++M     ISW SR Q+     T+EAEY +L++V+K+VL  LRQV  FM P   +  + VFEDN+GAI+LA N  ++  SKHIDV H  +R+    +++ + +V S  QHAD LTK L    F     ++++++
Sbjct:  184 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLF-LRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSMD 612          
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 5.660e-59
Identity = 148/474 (31.22%), Postives = 227/474 (47.89%), Query Frame = 0
Query:   19 IGTKMLYKRKIGQDGKVEKYKCRLVTQGFWQVEGVHYTEKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERIYIEIP---------------------------------------------------------------------------EEFQEFLGAL------KDMGDAEYYTGCHITRNRKA-RELKFDQCLYVESMVKIFDVKKEAKILAASGVPTLSNADEPRNPEEKEEMKMFPYREAVGKLMWTATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGTSEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTKPLDVQKFCKPAKFILNV 410
            + +K  +  K  +DGK+EK+K RLV +GF Q+  V Y    SP PS+ASI+++LA A  K  +L H D +QAF  A +DE +++ +P                                                                           ++ +E L +L      KD+G+  ++ GC + R+ +A   L+  Q  Y++ +V  FDV+  + I A+ GV      D+    E       +P REA+G +MW +T +RPDI+ AVRAVAR    P   H K ++KI   L  T++ GITY  +G GL +E Y D+ + A  + RRSVSG    +    IS  S+ Q + +  ++EAEY A  E VK+ L V R V  F+ P     ++ V EDN+GA+ L  N  +S RSKHIDV +  +R    +  + + +V + +QHAD+LTK L         + ++N+
Sbjct: 1434 VSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGMTLRISQTAYID-IVNRFDVQSTSSIPASPGVDIGPKRDDESGGE-------WPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYE-RGSGLGLEVYVDASY-ADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFV-RAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNL 1896          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig97832.19227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG0_9PHAE3.170e-6531.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A5AHF5_VITVI6.580e-6433.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3Q908_9STRA3.340e-6231.42Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5L0Z9_9PHAE2.100e-6138.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE4.350e-6132.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD60_9PHAE1.520e-6040.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBD2_9PHAE4.700e-6037.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438FEW0_VITVI5.610e-6032.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KQB8_9PHAE1.840e-5932.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5LGF7_9PHAE5.660e-5931.22Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 6..108
e-value: 1.5E-22
score: 80.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 189..399
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 189..399

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 6..108
e-value: 1.5E-22
score: 80.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 189..399
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 189..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig97832contigF-distichus_contig97832:679..2159 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig97832.19227.1mRNA_F-distichus_contig97832.19227.1Fucus distichus monoicousmRNAF-distichus_contig97832 679..2159 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig97832.19227.1 ID=prot_F-distichus_contig97832.19227.1|Name=mRNA_F-distichus_contig97832.19227.1|organism=Fucus distichus monoicous|type=polypeptide|length=412bp
MVENCVYNQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVTQGFWQV
EGVHYTEKYSPTPSTASIRMLLATAAAKDGELRHLDAEQAFLKANIDERI
YIEIPEEFQEFLGALKDMGDAEYYTGCHITRNRKARELKFDQCLYVESMV
KIFDVKKEAKILAASGVPTLSNADEPRNPEEKEEMKMFPYREAVGKLMWT
ATMTRPDIACAVRAVARFCENPGPAHKKTVMKIFRNLLHTKEWGITYGGQ
GCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKRAISWHSRMQEVTAPGT
SEAEYFALSEVVKDVLLVLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATN
KHASRRSKHIDVTHDLVRDASDAQKVRVAYVRSEDQHADLLTKPLDVQKF
CKPAKFILNVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like