prot_F-distichus_contig971.19162.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig971.19162.1
Unique Nameprot_F-distichus_contig971.19162.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length872
Homology
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: A0A6H5LLL6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLL6_9PHAE)

HSP 1 Score: 420 bits (1079), Expect = 4.330e-129
Identity = 252/478 (52.72%), Postives = 309/478 (64.64%), Query Frame = 0
Query:  191 DVGIEATLCRAPTVACLGSSCGKAGTEVAVLWEGFGCQAAAAAATAAAPPLNFTFACRFSGVEVPAVRILRDDEGLGWSGLDSGWAPEELRGEYWGPEWARRAESEGDEAGQGLGLLCEVPRLAWVEQGRDEAVMVPVEVVWSLSMQASASARRQVARSAGIVSVRGFSVVRSARHTDVNSHVLAFRYYRDDAEAPSCGCSSAPGEEDHKCDSCLVCGGSGTTVDCGGFCHGEAYKDVCDECVGGMTGTVGGA-CEKY-SHANNPATEALVSLSQSIMMLVALTIMTAFLVTCLFLARAIVVRGIMALEDRRHGGERRGIFHRSRGLSPAEISSLETVKY-TGVPVAAAAXXXXKAKEEDGEENSCKSAEGAWEGLKREGGGL-------GDGVSDREGA--------GAGGVAAAEASSRFSLVDQCAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCKQNAREGLLR 650
            D   E TLCRAPT+ACL  +CGKAG+EV VLWEG GC+AAA+        LN TF+CR  G+EVPAV  L  +     SG  +G   EE     WGP WA      G E G GL  +CEVPRL W E G++EAVMVPVEV+WSL  QAS  A+ QV   A  V+V G SV+  A    +NSHVLAFRYYRDDA+AP CGCS++P + +  CDSCLVCGG G+T DCGGFCHGEA    C EC GGMTG  GG  C++Y  + + PA  AL+SLSQSIMMLVAL+IMTAFL  CLFLARA+++RG++A+E  RHG  RR +F R RGLSP+E+  LETV+Y T V +         +K++  ++ SC    G   G++  G  +         G  ++ G         G  G   A+ +   S  D C+ICLG FEDG+VLRKLPC HLFHQ CVDEWL L+VSCPLCK++AREGL R
Sbjct:  269 DADTEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAAS--------LNVTFSCRIGGLEVPAVG-LGGETTTSSSGSWAGGFEEEA----WGPYWA------GGEVGGGL--VCEVPRLEWAEAGQEEAVMVPVEVLWSLPEQASDRAKEQVRLGAAGVAVHGLSVLGDAGL--INSHVLAFRYYRDDADAPDCGCSTSPRQTELTCDSCLVCGGDGSTKDCGGFCHGEASVSPCGECSGGMTGVTGGLWCDEYREYLDGPAEAALLSLSQSIMMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRVFSRHRGLSPSELDCLETVEYSTAVSIV--------SKDKGNDDISCMDGGGDSSGVELIGEKVDPSNSRSSSGSEEKRGGVESAGMMGGGDGAFIAQGAEAASSAD-CSICLGGFEDGDVLRKLPCLHLFHQKCVDEWLHLSVSCPLCKRSAREGLRR 714          
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: D7FI05_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI05_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 1.270e-125
Identity = 254/480 (52.92%), Postives = 307/480 (63.96%), Query Frame = 0
Query:  191 DVGIEATLCRAPTVACLGSSCGKAGTEVAVLWEGFGCQAAAAAATAAAPPLNFTFACRFSGVEVPAVRILRDDEGLGWSGLDSGWAPEELRGEYWGPEWARRAESEGDEAGQGLGLLCEVPRLAWVEQGRDEAVMVPVEVVWSLSMQASASARRQVARSAGIVSVRGFSVVRSARHTDVNSHVLAFRYYRDDAEAPSCGCSSAPGEEDHKCDSCLVCGGSGTTVDCGGFCHGEAYKDVCDECVGGMTGTVGGA-CEKYS-HANNPATEALVSLSQSIMMLVALTIMTAFLVTCLFLARAIVVRGIMALEDRRHGGERRGIFHRSRGLSPAEISSLETVKY-TGVPVAAAAXXXXKAKEEDGEENSCKSAEGAWEGL-------------KREGGGLGDGVSDREGAGAGG----VAAAEASSRFSLVDQCAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCKQNAREGLLR 650
            D   E TLCRAPT+ACL  +CGKAG+EV VLWEG GC+AAA+        LN TF+CR  G+EVPAV +    EG G +   SG        E WGP+W       G E G GL  +CEVPRL W E G+DEAVMVPVEV+WSL  QAS SA+ QV   A  V V G SV+  A    +NSHVLAFRYYRDDAEAP CGCS++P + +  CDSCLVCGG G+T DCGGFCHGEA    C EC GGMTG  GG  C++Y  + + PA  AL+SLSQSIMMLVAL+IMTAFL  CLFLARA+++RG++A+E  RHG  RR  F R RGLSP+E+  LETV+Y T + +         +K++  ++NSC +A+G  +                R   G        E AG  G       A+ +   S  D CAICLG FE+G+VLRKLPC H FHQ CVDEWL L+VSCPLCK++AREGL R
Sbjct:  784 DGDTEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAAS--------LNVTFSCRIGGLEVPAVSL----EG-GATASSSGSLAGGFEEEAWGPDWV------GGEGGGGL--VCEVPRLEWAEAGQDEAVMVPVEVLWSLPEQASDSAKEQVRLGAAGVGVHGLSVLGDAGL--INSHVLAFRYYRDDAEAPDCGCSTSPRQTELTCDSCLVCGGDGSTKDCGGFCHGEASVSPCGECSGGMTGVTGGLWCDEYGEYLDGPAEAALLSLSQSIMMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRAFSRHRGLSPSELDCLETVEYSTAIDIV--------SKDKGNDDNSC-AADGGGDSSGVELIGEKVSPTSSRSSSGXXXXXXXVESAGVTGGDDEAFIAQGAEAASSAD-CAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGLRR 1230          
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: A0A5B8MYU6_9CHLO (RING-type E3 ubiquitin transferase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYU6_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 1.370e-11
Identity = 32/80 (40.00%), Postives = 55/80 (68.75%), Query Frame = 0
Query:  584 GVAAAEASSRFSLVDQCAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCKQNAREGLLRQRRRGRRRATPAG 663
            GV   ++ +++   D C++C+  FE+G+ +R+LPC H+FH +CVDEWL+L  SCP+C+++ R+ L ++   G   A P+G
Sbjct:   98 GVPDRDSGAKYQTTD-CSVCMEAFEEGDRIRELPCGHMFHLECVDEWLKLHPSCPICREDVRDAL-KEETAGEEEAAPSG 175          
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: A0A699K2M5_TANCI (E3 ubiquitin-protein ligase At1g63170-like (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699K2M5_TANCI)

HSP 1 Score: 70.1 bits (170), Expect = 2.210e-11
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  600 CAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCKQNAREGLL 649
            C ICL  + + + LR+LPC H FH+DCVD+WL++  SCPLCK    E +L
Sbjct:    2 CCICLAKYANNDELRELPCTHFFHKDCVDKWLKINASCPLCKSEVGESVL 51          
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: A0A0D2MUW8_9CHLO (E3 ubiquitin-protein ligase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MUW8_9CHLO)

HSP 1 Score: 75.5 bits (184), Expect = 2.390e-11
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  598 DQCAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCK 641
            D+C ICLG +EDGEVL++LPC H +H +C+D WLE +  CPLCK
Sbjct:  203 DECTICLGSYEDGEVLKQLPCGHSYHSECIDAWLEKSAVCPLCK 246          
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: A0A8J5KWT7_ZINOF (RING-type domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5KWT7_ZINOF)

HSP 1 Score: 70.1 bits (170), Expect = 2.390e-11
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
Query:  591 SSRFSLVDQCAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCKQN 643
            S   S + +C ICL  +EDG  LR+LPC+H FH  C+D+WL +  +CPLCK N
Sbjct:    4 SYAMSTISECCICLSPYEDGVELRELPCNHHFHCGCIDKWLHINATCPLCKFN 56          
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: A0A6I9YLF3_9SAUR (RING finger protein 215-like n=2 Tax=Thamnophis TaxID=34999 RepID=A0A6I9YLF3_9SAUR)

HSP 1 Score: 69.7 bits (169), Expect = 4.420e-11
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  597 VDQCAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCKQN 643
            +D CAICL  F+  + LR LPC H FH+DCVD WL L  +CPLCK N
Sbjct:   26 IDSCAICLDQFQRNQCLRVLPCLHEFHRDCVDPWLLLQQTCPLCKHN 72          
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: A0A2K1I9N5_PHYPA (RING-type domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1I9N5_PHYPA)

HSP 1 Score: 74.3 bits (181), Expect = 4.710e-11
Identity = 38/70 (54.29%), Postives = 46/70 (65.71%), Query Frame = 0
Query:  575 SDREGAGAGG-VAAAEASSRFSLVDQ--CAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCK 641
            SD EGAG GG VAA     R+   D   C ICLG ++DG  LR+L C H FH +CVD+WL++  SCPLCK
Sbjct:  132 SDSEGAGEGGWVAAGTEKERWVSADDAVCCICLGKYKDGVELRELVCTHHFHVECVDKWLKINASCPLCK 201          
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: A0A2D4HI44_MICLE (RING-type domain-containing protein (Fragment) n=2 Tax=Colubroidea TaxID=34989 RepID=A0A2D4HI44_MICLE)

HSP 1 Score: 71.6 bits (174), Expect = 6.230e-11
Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  597 VDQCAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCKQN 643
            +D CAICL  F+  + LR LPC H FHQDCVD WL L  +CPLCK N
Sbjct:   97 IDSCAICLDQFQKNQCLRVLPCLHEFHQDCVDPWLLLQQTCPLCKHN 143          
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Match: A0A2D4KL61_9SAUR (RING-type domain-containing protein (Fragment) n=1 Tax=Micrurus paraensis TaxID=1970185 RepID=A0A2D4KL61_9SAUR)

HSP 1 Score: 70.1 bits (170), Expect = 6.470e-11
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  597 VDQCAICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCKQN 643
            +D CAICL  F+  + LR LPC H FH+DCVD WL L  +CPLCK N
Sbjct:   51 IDSCAICLDQFQKNQCLRVLPCLHEFHRDCVDPWLLLQQTCPLCKHN 97          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig971.19162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LLL6_9PHAE4.330e-12952.72RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FI05_ECTSI1.270e-12552.92RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A5B8MYU6_9CHLO1.370e-1140.00RING-type E3 ubiquitin transferase n=1 Tax=Chlorop... [more]
A0A699K2M5_TANCI2.210e-1152.00E3 ubiquitin-protein ligase At1g63170-like (Fragme... [more]
A0A0D2MUW8_9CHLO2.390e-1161.36E3 ubiquitin-protein ligase n=1 Tax=Monoraphidium ... [more]
A0A8J5KWT7_ZINOF2.390e-1150.94RING-type domain-containing protein n=1 Tax=Zingib... [more]
A0A6I9YLF3_9SAUR4.420e-1159.57RING finger protein 215-like n=2 Tax=Thamnophis Ta... [more]
A0A2K1I9N5_PHYPA4.710e-1154.29RING-type domain-containing protein n=1 Tax=Physco... [more]
A0A2D4HI44_MICLE6.230e-1161.70RING-type domain-containing protein (Fragment) n=2... [more]
A0A2D4KL61_9SAUR6.470e-1159.57RING-type domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 599..641
e-value: 0.0033
score: 11.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 600..640
e-value: 6.4E-7
score: 39.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 598..641
e-value: 2.3E-12
score: 47.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 600..641
score: 12.652
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 585..647
e-value: 6.0E-18
score: 65.8
NoneNo IPR availablePANTHERPTHR46539FAMILY NOT NAMEDcoord: 599..651
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 465..489
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..464
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 490..871
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 599..644
NoneNo IPR availableTMHMMTMhelixcoord: 468..490

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 599..641
e-value: 0.0033
score: 11.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 600..640
e-value: 6.4E-7
score: 39.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 598..641
e-value: 2.3E-12
score: 47.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 600..641
score: 12.652
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 585..647
e-value: 6.0E-18
score: 65.8
NoneNo IPR availablePANTHERPTHR46539FAMILY NOT NAMEDcoord: 599..651
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 465..489
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..464
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 490..871
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 599..644
NoneNo IPR availableTMHMMTMhelixcoord: 468..490

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig971contigF-distichus_contig971:6424..19457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig971.19162.1mRNA_F-distichus_contig971.19162.1Fucus distichus monoicousmRNAF-distichus_contig971 4873..19480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig971.19162.1 ID=prot_F-distichus_contig971.19162.1|Name=mRNA_F-distichus_contig971.19162.1|organism=Fucus distichus monoicous|type=polypeptide|length=872bp
MTTSPCCTRIFTSSSGPRRLPPRRSRRRSSPTALCGTATCSSGIERTGLA
ASAGTPSCRRRFVSATFNGLPSTAEFPSSDSSAPPHSRLHSNSQSQSQSP
PLRLETPVPYKFSASSSDASAGRSSSSSGYGSGSESGSFESRPNSGEGGS
DLTSFALASDEADVDDVTHDEGDDGIMYADDNDDADGGDFDVGIEATLCR
APTVACLGSSCGKAGTEVAVLWEGFGCQAAAAAATAAAPPLNFTFACRFS
GVEVPAVRILRDDEGLGWSGLDSGWAPEELRGEYWGPEWARRAESEGDEA
GQGLGLLCEVPRLAWVEQGRDEAVMVPVEVVWSLSMQASASARRQVARSA
GIVSVRGFSVVRSARHTDVNSHVLAFRYYRDDAEAPSCGCSSAPGEEDHK
CDSCLVCGGSGTTVDCGGFCHGEAYKDVCDECVGGMTGTVGGACEKYSHA
NNPATEALVSLSQSIMMLVALTIMTAFLVTCLFLARAIVVRGIMALEDRR
HGGERRGIFHRSRGLSPAEISSLETVKYTGVPVAAAAAAGAKAKEEDGEE
NSCKSAEGAWEGLKREGGGLGDGVSDREGAGAGGVAAAEASSRFSLVDQC
AICLGMFEDGEVLRKLPCDHLFHQDCVDEWLELAVSCPLCKQNAREGLLR
QRRRGRRRATPAGGTSAVFYSVGSRASPDASSGGTAEVRRERDDSGSSSD
VETTPEIPAGRGWWTLRWPLPLELVTRAFRGGGGWAGGRTWLQLRTGENE
DPVPSEGNYHSSSEGQPGLGNVANDTSQLVPTERLLAFWGDPLRRGRRRT
DEETIGSDDNAVLGAGVETASGHGFDGDRVSGEGGRSGRTVEEFELAPVG
SATPLAAAAARVGGSVILEIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD