prot_F-distichus_contig97073.19159.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig97073.19159.1
Unique Nameprot_F-distichus_contig97073.19159.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length334
Homology
BLAST of mRNA_F-distichus_contig97073.19159.1 vs. uniprot
Match: A0A6H5JG49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG49_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 4.230e-63
Identity = 169/375 (45.07%), Postives = 204/375 (54.40%), Query Frame = 0
Query:    1 GCSQLPEGPTSRLYSPEIAELLASAIAVGLQAR------ADARESGDRMTASQGDDG-------DAQTQVATLRLGNNRFSIWSWVQVIQALSSRPPRELDLSFCISFPTTTEAMASGSGPSTLPSASESAGFPEEAAKWIDGNAFCGGPQSRPL--------LSELLALTILPADAPGVQILDLSGSSGFLPPVDRPRLCGPREGGRAEGDGGVIAP-----CPSSSSTEAFFVNVRDALMSPLCRTVRLSLSGARGPWLQGLGTSTSTVG-------------GQVLGPKYVKVLCEAASACSSLRFLDLGGSDLSGSLGATAAAAAVKCLIRKSSDG--GDGATDPGLSRLSLRTCRLGVAGLSAIVSSLAA 334
            GCSQ+P+GP  RLYSP++++LLASA+  GL+AR      A A  +G     S GD G       D + QV+TLR+GNNRFS  SWV V++ LSS PPRELDLSF  + P  + A   G G +T  + +              GN    G  + PL        L ELLA T+LPADAPGV+ L+L+GS+G L   DR R    R G   EG  G+  P     C SS   EAF + +RDALMSPLC T  L LSG RGP                            V GP+  K LCEAASAC+SLR LDL G DLSG +GA AAAAAV CLI    +   G G     L RLSLR C L  AGL+A+V +L A
Sbjct: 1214 GCSQIPDGPAGRLYSPQVSDLLASALRAGLEARVVAGKLAAANGAGRVADGSSGDGGNDERSESDGRAQVSTLRMGNNRFSWESWVDVLEVLSSAPPRELDLSFASALPGRSAATGDGVGTATAAAVA--------LTPVGGGNNDSPGAVTPPLRPAPPAQTLGELLAATVLPADAPGVETLNLTGSTGLLLLDDRRRQ--QRRG--VEGGVGIEDPSEPLACLSSLGMEAFVLLLRDALMSPLCETTHLLLSGVRGPXXXXXXXXXXXXXXXXXXXXXXXXXXAAVFGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAAAAAAVSCLISNDDEDEVGLGMAGGVLRRLSLRACGLEAAGLAAVVRALVA 1576          
BLAST of mRNA_F-distichus_contig97073.19159.1 vs. uniprot
Match: D8LDQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ0_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 4.250e-59
Identity = 160/369 (43.36%), Postives = 193/369 (52.30%), Query Frame = 0
Query:    1 GCSQLPEGPTSRLYSPEIAELLASAIAVGLQAR------ADARESGDRMTASQGDDG-------DAQTQVATLRLGNNRFSIWSWVQVIQALSSRPPRELDLSFCISFPTTTEAMASGSGPSTLPSASESAGFPEEAAKWIDGNAFCGGPQSRPL-----LSELLALTILPADAPGVQILDLSGSSGFLPPVDRPRLCGPREGGRAEGDGGVIAP--CPSSSSTEAFFVNVRDALMSPLCRTVRLSLSGARGPWLQGLGTSTSTVG-------------GQVLGPKYVKVLCEAASACSSLRFLDLGGSDLSGSLGATAAAAAVKCLIRKSSDG--GDGATDPGLSRLSLRTCRLGVAGLSAIVSSLAA 334
            GCSQ+P+GP  RLYSP++++LLASA++ GL+AR      A A  +G     S GD G       D + QV+TLR+GNNRFS  SW  V++ LSS PPRELDLSF    P  + A A G     + +A+                     P  RP      L ELLA T+LPADAPGV+ L+L+GS+G L                        AP  CPSSS  EAF + +RD LMSPLC T  L LSG RGP                            V GP+  K LCEAASAC+SLR LDL G DLSG +GA AAAAAV CLI    +   G G     L RLSLR C LG AGL+ +V +L A
Sbjct: 1152 GCSQIPDGPVRRLYSPQVSDLLASALSAGLEARVVAGKLAAATGAGRVADGSGGDGGNDERSESDGRAQVSTLRMGNNRFSRESWGDVLEVLSSNPPRELDLSFASVLPGRSAATADG----VVTTATXXXXXXXXXXXXXXXXXGAVTPPPRPAPPAQTLGELLAATVLPADAPGVETLNLTGSTGLLLXXXXXXXXXXXXXXXXXXXX-XXAPLACPSSSGMEAFLLLLRDTLMSPLCETTHLLLSGVRGPXXXXXXXXXXXXXXXXXXXXXXXXXXAAVFGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAAAAAAVSCLISNHDEDEVGLGMAGGRLRRLSLRACALGAAGLAVVVRALVA 1515          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig97073.19159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG49_9PHAE4.230e-6345.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDQ0_ECTSI4.250e-5943.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 57..333

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 57..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig97073contigF-distichus_contig97073:49..1113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig97073.19159.1mRNA_F-distichus_contig97073.19159.1Fucus distichus monoicousmRNAF-distichus_contig97073 49..1113 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig97073.19159.1 ID=prot_F-distichus_contig97073.19159.1|Name=mRNA_F-distichus_contig97073.19159.1|organism=Fucus distichus monoicous|type=polypeptide|length=334bp
GCSQLPEGPTSRLYSPEIAELLASAIAVGLQARADARESGDRMTASQGDD
GDAQTQVATLRLGNNRFSIWSWVQVIQALSSRPPRELDLSFCISFPTTTE
AMASGSGPSTLPSASESAGFPEEAAKWIDGNAFCGGPQSRPLLSELLALT
ILPADAPGVQILDLSGSSGFLPPVDRPRLCGPREGGRAEGDGGVIAPCPS
SSSTEAFFVNVRDALMSPLCRTVRLSLSGARGPWLQGLGTSTSTVGGQVL
GPKYVKVLCEAASACSSLRFLDLGGSDLSGSLGATAAAAAVKCLIRKSSD
GGDGATDPGLSRLSLRTCRLGVAGLSAIVSSLAA
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