prot_F-distichus_contig96746.19127.1 (polypeptide) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig96746.19127.1 vs. uniprot
Match: D7FMS6_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS6_ECTSI) HSP 1 Score: 256 bits (655), Expect = 7.070e-83 Identity = 126/177 (71.19%), Postives = 148/177 (83.62%), Query Frame = 0
Query: 1 QFHRDFRNNSLLGLVQDRFPRSTLAYVVVKVMLDDSAPTERKIKEQATPGMSARTLFDKLYKAWPAN---KTKRLPDWGNFMTWMGAICSDLTGMVSTIHGSDPQNPKYMVNIATMVQYIRSRLVKCTMRDRYGKETARIMEILLQNKFLEQQQVAEMAMLPPGDARTRLYRLLRDR 174
+FHRDFRN +LLGLVQDRFP+S LAY+VVKVMLD+S+PTERK+ EQ + +SAR LFDKL +AW N K K +PDW F++WM A+C+DLT MVS I GSD QNP+Y+VN+A MVQYIR LVKCT RDRYGKETARIMEILLQNK+L+QQQV EMAM+PP DAR RLYRL+RDR
Sbjct: 45 KFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASISARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRYGKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDR 221
BLAST of mRNA_F-distichus_contig96746.19127.1 vs. uniprot
Match: W7U6Z3_9STRA (DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Z3_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.400e-7 Identity = 50/183 (27.32%), Postives = 86/183 (46.99%), Query Frame = 0
Query: 1 QFHRDFRNNSLLGLVQDRFPRSTLAYVVVKVMLDDSAPTERK--IKEQATPGMSARTLFDKLYKAWPANKTKRLPDWGNFMTWMGAICSDLTGMVSTIHGSDPQNPKYMVNIATMVQYIRSRLVKCTMRDRY--------GKETARIMEILLQNKFLEQQQVAEMAMLPPGDARTRLYRLLRD 173
QFHRD R+ + L V+ + +T A +V+ +L S P ER + + +S L ++ P N T ++ ++ + +D V + Y V + +++ +R R + +R+RY G ARI +LL K+L+ QQV+E+AM+ + R RLYR+ D
Sbjct: 423 QFHRDLRHVTCLRFVRQKV--NTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGELSSRVQL--PPNVTVKM--------YLEVLQND---PVQIVDREGTATDVYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYAD 590
BLAST of mRNA_F-distichus_contig96746.19127.1 vs. uniprot
Match: A0A2J7PPT7_9NEOP (DNA-directed RNA polymerase III subunit RPC3 n=3 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PPT7_9NEOP) HSP 1 Score: 57.4 bits (137), Expect = 1.890e-6 Identity = 43/174 (24.71%), Postives = 87/174 (50.00%), Query Frame = 0
Query: 1 QFHRDFRNNSLLGLVQDRFPRSTLAYVVVKVMLDDSAPTERKIKEQATPGMSARTLFDKLYKAWPANKTKRLPDWGNFMT-WMGAICSDLTGMVSTIHGSDPQNPKYMVNIATMVQYIRSRLVKCTMRDRYGKETARIMEILLQNKFLEQQQVAEMAMLPPGDARTRLYRLLRD 173
+FH+DFR+ ++ + R + A ++K +L + ++ +A S F +L +A K P G ++ ++ + D +G VS + D +Y +N+ T + ++ + +R+G + ARI ++ KF+EQ+Q+ ++AM+P +A+ YRLL +
Sbjct: 214 RFHQDFRDQIMVSAISRRCDDN--AGELLKELLK-----QMYLRTEAWAATSNPVPFTELREA--VRKQSSRPLLGQYIEQYLKVMEEDSSGFVSKV--GDSSGGQYSINMKTAFVQLTWATIENIVMERFGSKGARIFRLVRAKKFVEQEQIQQVAMIPAKEAKLLTYRLLEE 376
BLAST of mRNA_F-distichus_contig96746.19127.1 vs. uniprot
Match: F0XWN2_AURAN (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWN2_AURAN) HSP 1 Score: 57.4 bits (137), Expect = 2.220e-6 Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 0
Query: 68 KTKRLPDWGNFMTWMGAICSDLTGMVSTIHGSDPQNPKYMVNIATMVQYIRSRLVKCTMRDRYGKETARIMEILLQNKFLEQQQVAEMAMLPPGDARTRLYRL 170
KT D ++ A+ D VS + G + +++ A + ++R + + DRY E+AR+ +L+++ LEQ +AE A+LPP DAR RLYR+
Sbjct: 327 KTGAAVDKATIARYLEALQYDQVAFVSKLAGGRGDD-RFLFEAARCLDHVRRETLHALLVDRYDAESARLHRVLMRHDALEQGDLAERALLPPKDARERLYRM 428
BLAST of mRNA_F-distichus_contig96746.19127.1 vs. uniprot
Match: R4G8T2_RHOPR (DNA-directed RNA polymerase III subunit RPC3 n=4 Tax=Triatominae TaxID=70999 RepID=R4G8T2_RHOPR) HSP 1 Score: 53.5 bits (127), Expect = 3.970e-5 Identity = 40/175 (22.86%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 1 QFHRDFRNNSLLGLVQDRFPR--STLAYVVVKVMLDDSAPTERKIKEQATPGMSARTLFDKLYKAWPANKTKRLPDWGNFMTWMGAICSDLTGMVSTIHGSDPQNPKYMVNIATMVQYIRSRLVKCTMRDRYGKETARIMEILLQNKFLEQQQVAEMAMLPPGDARTRLYRLLRD 173
+FH+D R+ ++ V+ RF ST +++++M + + P P ++ R +K K WP + ++ L ++ I D + + VN+AT +Q I + ++ + R+G + ARI ++ + ++++Q+Q+ ++AM+P +A+ Y+LL++
Sbjct: 219 RFHQDLRDEIVIEAVRRRFDNEASTFMDLLLQLMYERTDPWATS--SNPIPFVTIRDSLEK--KKWP-HLSQYLDQ------YIKVIEEDSCNFIR--RSGEGSTSSVFVNLATALQNITAAAIENVVEHRFGCKAARIFRLVKKKRYIDQEQLQKLAMIPDKEAKQLTYKLLQE 380 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96746.19127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
Analysis Name: InterProScan on OGS1.0 Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-distichus_contig96746.19127.1 ID=prot_F-distichus_contig96746.19127.1|Name=mRNA_F-distichus_contig96746.19127.1|organism=Fucus distichus monoicous|type=polypeptide|length=179bpback to top |