prot_F-distichus_contig9657.19113.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9657.19113.1
Unique Nameprot_F-distichus_contig9657.19113.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length77
Homology
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: D7FP92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP92_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 6.640e-39
Identity = 63/76 (82.89%), Postives = 64/76 (84.21%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQASDRSLASGVG 76
            MADYEPRGITVRDVA ADFIKAYAEHLKNTGRVELPSWCD+VKTAPHKEMCPYD DWYYIRA   A    L  G G
Sbjct:    1 MADYEPRGITVRDVAAADFIKAYAEHLKNTGRVELPSWCDLVKTAPHKEMCPYDQDWYYIRAAAVARKVYLRPGRG 76          
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: A0A835ZNM6_9STRA (Ribosomal protein S19e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNM6_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.480e-29
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 MADYEPRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQASDRSLASGVG 76
            MA YEP+G++VRDVAPA FIKAYA+HLKNTGR ELP W D+VKT   KE+ PYDPDWYY+RA   A    L  G G
Sbjct:    1 MATYEPQGVSVRDVAPAKFIKAYADHLKNTGRFELPPWVDLVKTGTQKELAPYDPDWYYVRAAAVARKVYLRPGRG 76          
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: A0A0P5ZW38_9CRUS (40S ribosomal protein S19 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A0P5ZW38_9CRUS)

HSP 1 Score: 102 bits (255), Expect = 2.900e-26
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 MADYE-PRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQA 66
            MA+Y+ PRG+TVRDV PADFIKAYAEHLK +G++ELPSW D+VKTA  KE  P DPDWYY+RA   A
Sbjct:    1 MAEYDAPRGVTVRDVKPADFIKAYAEHLKRSGKMELPSWWDVVKTASFKEFSPADPDWYYVRAASIA 67          
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: A0A067C4P4_SAPPC (30S ribosomal protein S19e n=4 Tax=Eukaryota TaxID=2759 RepID=A0A067C4P4_SAPPC)

HSP 1 Score: 99.8 bits (247), Expect = 4.730e-25
Identity = 48/77 (62.34%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    1 MADYE-PRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQASDRSLASGVG 76
            MAD+E PRG+TVRDV PADFIK YAEHLK +G++ELP+W D+VKTA +KE  P D DWYYIRA   A    L    G
Sbjct:    1 MADFEAPRGVTVRDVKPADFIKLYAEHLKRSGKMELPNWWDIVKTASYKEHSPVDADWYYIRAASIARKVYLRENTG 77          
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: H3G8P8_PHYRM (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3G8P8_PHYRM)

HSP 1 Score: 99.8 bits (247), Expect = 5.120e-25
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 MADYEP----RGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQA 66
            MADY+     RG+TVRDV PADFIKAYAEHLK +G++ELP+W D+VKTA  KE  P DPDWYYIRA   A
Sbjct:    1 MADYDEEEVTRGVTVRDVKPADFIKAYAEHLKRSGKIELPAWWDVVKTAAFKEYSPADPDWYYIRAASIA 70          
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: A0A0W8BY81_PHYNI (40S ribosomal protein S19-1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8BY81_PHYNI)

HSP 1 Score: 99.8 bits (247), Expect = 5.120e-25
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 MADYEP----RGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQA 66
            MADY+     RG+TVRDV PADFIKAYAEHLK +G++ELP+W D+VKTA  KE  P DPDWYYIRA   A
Sbjct:    1 MADYDEEEVVRGVTVRDVKPADFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASIA 70          
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: A0A2D4BMX9_PYTIN (NUP50 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMX9_PYTIN)

HSP 1 Score: 106 bits (264), Expect = 5.310e-25
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 MADYE-PRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQA 66
            MA+Y+ PRG+TVRDV PADFIKAYAEHLK +G++ELPSW D+VKTA  KE  PYDPDWYYIRA   A
Sbjct:  336 MAEYDAPRGVTVRDVKPADFIKAYAEHLKRSGKMELPSWWDVVKTASFKEHAPYDPDWYYIRAASIA 402          
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: K3WSU7_GLOUD (Uncharacterized protein n=2 Tax=Oomycota TaxID=4762 RepID=K3WSU7_GLOUD)

HSP 1 Score: 99.4 bits (246), Expect = 6.880e-25
Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 MADYE--PRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQA 66
            MA+YE  PRG+TVRDV  ADFIKAYAEHLK +G++ELPSW D+VKTA  KE  P DPDWY++RA   A
Sbjct:    1 MAEYEETPRGVTVRDVKAADFIKAYAEHLKRSGKIELPSWWDIVKTASFKEYSPNDPDWYFVRAASIA 68          
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: A0A6A3J4U8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3J4U8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.030e-24
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 MADYEP----RGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQA 66
            MADY+     RG+TVRDV PADFIKAYAEHLK +G++ELP+W D+VKTA  KE  P DPDWYYIRA   A
Sbjct:   28 MADYDEEEVTRGVTVRDVKPADFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPSDPDWYYIRAASIA 97          
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Match: A0A024FTV2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FTV2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.380e-24
Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 MADYE-PRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEMCPYDPDWYYIRAGKQASDRSLASGVG 76
            M+DYE  RG+ VRDV  ADFIKAYA+HLK +G++ELP+W D+VKTA  KE  PYDPDWYYIRA   A    L    G
Sbjct:    1 MSDYEISRGVNVRDVKAADFIKAYADHLKRSGKMELPNWSDVVKTASFKEHAPYDPDWYYIRAASIARKVYLRQNTG 77          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9657.19113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP92_ECTSI6.640e-3982.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZNM6_9STRA2.480e-2965.79Ribosomal protein S19e n=1 Tax=Tribonema minus Tax... [more]
A0A0P5ZW38_9CRUS2.900e-2670.1540S ribosomal protein S19 n=3 Tax=Eukaryota TaxID=... [more]
A0A067C4P4_SAPPC4.730e-2562.3430S ribosomal protein S19e n=4 Tax=Eukaryota TaxID... [more]
H3G8P8_PHYRM5.120e-2567.14Uncharacterized protein n=14 Tax=Peronosporaceae T... [more]
A0A0W8BY81_PHYNI5.120e-2567.1440S ribosomal protein S19-1 n=3 Tax=Phytophthora T... [more]
A0A2D4BMX9_PYTIN5.310e-2573.13NUP50 domain-containing protein n=1 Tax=Pythium in... [more]
K3WSU7_GLOUD6.880e-2567.65Uncharacterized protein n=2 Tax=Oomycota TaxID=476... [more]
A0A6A3J4U8_9STRA1.030e-2467.14Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A024FTV2_9STRA1.380e-2461.04Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001266Ribosomal protein S19eSMARTSM01413Ribosomal_S19e_2coord: 10..74
e-value: 1.0E-6
score: 7.3
IPR001266Ribosomal protein S19ePFAMPF01090Ribosomal_S19ecoord: 10..62
e-value: 7.8E-21
score: 74.2
IPR001266Ribosomal protein S19ePANTHERPTHR1171040S RIBOSOMAL PROTEIN S19coord: 8..76
IPR038111Ribosomal protein S19e domain superfamilyGENE3D1.10.10.2700coord: 1..76
e-value: 2.0E-23
score: 84.6
NoneNo IPR availablePANTHERPTHR11710:SF1440S RIBOSOMAL PROTEIN S19-1-RELATEDcoord: 8..76
NoneNo IPR availablePRODOMPD003854coord: 8..76
e-value: 7.0E-20
score: 233.0
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 9..64

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001266Ribosomal protein S19eSMARTSM01413Ribosomal_S19e_2coord: 10..74
e-value: 1.0E-6
score: 7.3
IPR001266Ribosomal protein S19ePFAMPF01090Ribosomal_S19ecoord: 10..62
e-value: 7.8E-21
score: 74.2
IPR001266Ribosomal protein S19ePANTHERPTHR1171040S RIBOSOMAL PROTEIN S19coord: 8..76
IPR038111Ribosomal protein S19e domain superfamilyGENE3D1.10.10.2700coord: 1..76
e-value: 2.0E-23
score: 84.6
NoneNo IPR availablePANTHERPTHR11710:SF1440S RIBOSOMAL PROTEIN S19-1-RELATEDcoord: 8..76
NoneNo IPR availablePRODOMPD003854coord: 8..76
e-value: 7.0E-20
score: 233.0
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 9..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9657contigF-distichus_contig9657:3733..3963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9657.19113.1mRNA_F-distichus_contig9657.19113.1Fucus distichus monoicousmRNAF-distichus_contig9657 3733..3963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9657.19113.1 ID=prot_F-distichus_contig9657.19113.1|Name=mRNA_F-distichus_contig9657.19113.1|organism=Fucus distichus monoicous|type=polypeptide|length=77bp
MADYEPRGITVRDVAPADFIKAYAEHLKNTGRVELPSWCDMVKTAPHKEM
CPYDPDWYYIRAGKQASDRSLASGVGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001266Ribosomal_S19e
IPR038111Ribosomal_S19e_sf
IPR036390WH_DNA-bd_sf