prot_F-distichus_contig96458.19102.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig96458.19102.1
Unique Nameprot_F-distichus_contig96458.19102.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length92
Homology
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: D7FXZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ0_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.590e-27
Identity = 62/93 (66.67%), Postives = 69/93 (74.19%), Query Frame = 0
Query:    1 RWTEEAPELTGRTEGNKRVVFPDRGVIDGLGGGFSERS-GTHLFILARDQTVSLRPGDYAVVKIVEASGHTLRASAMARTTLLEHAELPGDGD 92
            RW+EEAPELTGRT+GNKRVVFPDRGVIDG+G  FSE S G       R Q  +LRPGDYAVV + E SG TLR SA+ARTTL EH  L  DG+
Sbjct:  134 RWSEEAPELTGRTDGNKRVVFPDRGVIDGMGR-FSEVSCGKQQ---QRQQRTTLRPGDYAVVNVRETSGITLRGSAIARTTLAEHDALRVDGE 222          
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: A0A6H5KEL0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEL0_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.610e-18
Identity = 57/127 (44.88%), Postives = 66/127 (51.97%), Query Frame = 0
Query:    1 RWTEEAPELTGRTEGNKRVVFPDRGVIDGLG---------------GGFSERSGTHLFILA--------------------RDQTVSLRPGDYAVVKIVEASGHTLRASAMARTTLLEHAELPGDGD 92
            RW EEAPELTGRT+GNKRVVFPDRGV+ GLG                  S R+     + A                         +LRPGDYAVV + E SG TLR SA+ARTTL+EH  L  DG+
Sbjct:  607 RWREEAPELTGRTDGNKRVVFPDRGVVGGLGRFSGVSCGQQXXXXXXRVSGRARADYLMPAPCKCXXXXXXXXXXXXXXXXXXXXTTLRPGDYAVVNVRETSGITLRGSAIARTTLVEHDALRVDGE 733          
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: A0A7S4FW59_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FW59_9EUGL)

HSP 1 Score: 63.5 bits (153), Expect = 9.820e-10
Identity = 37/82 (45.12%), Postives = 48/82 (58.54%), Query Frame = 0
Query:    3 TEEAPELTGRTEGNKRVVFPDRGVIDGLGGGFSERSGTHLFILARDQTVSLRPGDYAVVKIVEASGHTLRASAMARTTLLEH 84
            T E P  TGRT+ NKRVVF D  + DG  G  +  +          ++V   PGDY VV+I +A GHTLR  A+ART+L E+
Sbjct:  482 TPEHPMSTGRTDTNKRVVFEDHVIHDGWHGKVAPTA-------CGGRSVQPNPGDYVVVQITQARGHTLRGIAIARTSLAEY 556          
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: A0A836CJ12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ12_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.660e-8
Identity = 41/93 (44.09%), Postives = 49/93 (52.69%), Query Frame = 0
Query:    1 RWTEEAPELTGRTEGNKRVVFP-DRGVIDGLGGGFSERSGTHLFILARDQTVSLRPGDYAVVKIVEASGHTLRASAMARTTLLEHAE-LPGDG 91
            R T E P LTGRT+GNKRVV   D  V   L       +G  L        V  + GDY +V++ EA+GHTL    +ARTTL EH   L G G
Sbjct:  443 RSTTERPLLTGRTDGNKRVVMNGDTAVPASLDAAARAAAGAPL---PPSPLVLPQAGDYVLVRVEEATGHTLTGRVLARTTLREHQRWLEGGG 532          
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: H9G933_ANOCA (Uncharacterized protein n=1 Tax=Anolis carolinensis TaxID=28377 RepID=H9G933_ANOCA)

HSP 1 Score: 56.6 bits (135), Expect = 2.710e-7
Identity = 33/78 (42.31%), Postives = 42/78 (53.85%), Query Frame = 0
Query:    6 APELTGRTEGNKRVVFPDRGVIDGLGGGFSERSGTHLFILARDQTVSLRPGDYAVVKIVEASGHTLRASAMARTTLLE 83
            A EL+GR +GN +V+FPD  + DG G G                TV  +PGDY +VKI  A+  TL+   M RTTL E
Sbjct:  524 ALELSGRNDGNIKVIFPDVKMDDGTGSG---------------STVHAQPGDYVLVKISSANSQTLKGIPMRRTTLRE 586          
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: S4RRT8_PETMA (CDK5 regulatory subunit associated protein 1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RRT8_PETMA)

HSP 1 Score: 55.5 bits (132), Expect = 6.860e-7
Identity = 34/81 (41.98%), Postives = 41/81 (50.62%), Query Frame = 0
Query:    8 ELTGRTEGNKRVVFPDRGVIDGLGGGFSERSGTHLFILARDQTVSLRPGDYAVVKIVEASGHTLRASAMARTTLLEHAELP 88
            EL+GRT+GN RVVFPD  + DG G                    S R GDY  VKI  +S  +LR +A+ RTTL E    P
Sbjct:  479 ELSGRTDGNARVVFPDVLLPDGAGS---------------PALASARRGDYVAVKITSSSSQSLRGTALHRTTLREFHATP 544          
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: UPI001C4BC96F (mitochondrial tRNA methylthiotransferase CDK5RAP1 n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4BC96F)

HSP 1 Score: 53.5 bits (127), Expect = 3.290e-6
Identity = 31/78 (39.74%), Postives = 41/78 (52.56%), Query Frame = 0
Query:    8 ELTGRTEGNKRVVFPDRGVIDGLGGGFSERSGTHLFILARDQTVSLRPGDYAVVKIVEASGHTLRASAMARTTLLEHA 85
            EL+GR +GN +V+FPD  + DG   G                 V  +PGDY +VKI  A+  TL+  A+ RTTL E A
Sbjct:  527 ELSGRNDGNIKVIFPDVEMDDGTDSG---------------SVVHAQPGDYVLVKISSANSQTLKGIALRRTTLRESA 589          
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: A0A7S3KVK6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KVK6_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 8.450e-6
Identity = 38/87 (43.68%), Postives = 46/87 (52.87%), Query Frame = 0
Query:    1 RWTEEAPELTGRTEGNKRVVFPDRGVIDGLGGGFSERSGTHLFILARDQT-VSLRPGDYAVVKIVEASGHTLRASAMARTTLLEHAE 86
            R T EAP   GRT+ NKR+VFP   V D L    S  S   +     D T  +L  G+Y VV++ EA GHTLR   +  TTL   AE
Sbjct:  552 RSTMEAPAWHGRTDQNKRIVFP---VNDNL----SCISHDDILSGTEDATCTTLSKGEYGVVRVTEAKGHTLRGDLICLTTLKCFAE 631          
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: A0A7S3D2G3_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D2G3_9EUKA)

HSP 1 Score: 51.6 bits (122), Expect = 1.580e-5
Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 0
Query:    8 ELTGRTEGNKRVVFPDRGVIDGLGGGFSERSGTHLFILARDQTVSLRPGDYAVVKIVEASGHTLRASAMARTTLLEHA 85
            E TGRT+ N++VVFP + V   L G  S +             V L+ GD+ +V+I   +  TLR +A+ARTT+ EHA
Sbjct:  561 EWTGRTDTNRKVVFPKQAVASTLAGDASAK-------------VDLQVGDFVLVQIESDTLTTLRGTALARTTIPEHA 625          
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Match: A0A340YFD1_LIPVE (LOW QUALITY PROTEIN: CDK5 regulatory subunit associated protein 1 n=6 Tax=Laurasiatheria TaxID=314145 RepID=A0A340YFD1_LIPVE)

HSP 1 Score: 50.8 bits (120), Expect = 2.910e-5
Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 0
Query:    6 APELTGRTEGNKRVVFPDRGVIDGLGGGFSERSGTHLFILARDQTVSLRPGDYAVVKIVEASGHTLRASAMARTTLLEHA 85
            A +L+GR +GN +V+FPD  + D    G                 V  +PGDY +VKI  AS  TL+   + RTTL + A
Sbjct:  472 ATDLSGRNDGNLKVIFPDVEMEDVTNSGLR---------------VQAQPGDYVLVKITSASSQTLKGHVLCRTTLKDSA 536          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96458.19102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FXZ0_ECTSI2.590e-2766.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEL0_9PHAE1.610e-1844.88Reverse transcriptase domain-containing protein n=... [more]
A0A7S4FW59_9EUGL9.820e-1045.12Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A836CJ12_9STRA5.660e-844.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H9G933_ANOCA2.710e-742.31Uncharacterized protein n=1 Tax=Anolis carolinensi... [more]
S4RRT8_PETMA6.860e-741.98CDK5 regulatory subunit associated protein 1 n=2 T... [more]
UPI001C4BC96F3.290e-639.74mitochondrial tRNA methylthiotransferase CDK5RAP1 ... [more]
A0A7S3KVK6_9STRA8.450e-643.68Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S3D2G3_9EUKA1.580e-539.74Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A340YFD1_LIPVE2.910e-536.25LOW QUALITY PROTEIN: CDK5 regulatory subunit assoc... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002792TRAM domainPROSITEPS50926TRAMcoord: 7..77
score: 8.836

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002792TRAM domainPROSITEPS50926TRAMcoord: 7..77
score: 8.836

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96458contigF-distichus_contig96458:139..820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96458.19102.1mRNA_F-distichus_contig96458.19102.1Fucus distichus monoicousmRNAF-distichus_contig96458 139..820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig96458.19102.1 ID=prot_F-distichus_contig96458.19102.1|Name=mRNA_F-distichus_contig96458.19102.1|organism=Fucus distichus monoicous|type=polypeptide|length=92bp
RWTEEAPELTGRTEGNKRVVFPDRGVIDGLGGGFSERSGTHLFILARDQT
VSLRPGDYAVVKIVEASGHTLRASAMARTTLLEHAELPGDGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002792TRAM_dom