prot_F-distichus_contig96203.19073.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig96203.19073.1
Unique Nameprot_F-distichus_contig96203.19073.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length246
Homology
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BLAST of mRNA_F-distichus_contig96203.19073.1 vs. uniprot
Match: D8LIM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM1_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 3.080e-60
Identity = 123/236 (52.12%), Postives = 138/236 (58.47%), Query Frame = 0 
Query:   16 GIGARKAASPPQVRPGLSEGLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHRLVLFVDNMREGVIVRRHLAHHTCEQIVLQSTASFLLCFDDCRTITWKPLLAVNGGASNGG----GGILGKLRKRGRVSR-----RAESIMAEHIAHVLPATDPDPSHPGFFGTRALRLSEDIANPARTFSLLYGDWG-GACGVARAERLQAATGGGNGTLDVECDDDRTYALLFQ 241
            G G +    PP VRPGLSEGLEG                                   KHRL  FV  M+EGVIVRRHLAH TC+QIVLQST       DDCRTI+WKPLLA +GGA         G+   LR+    SR     RAE +   HIA VLPATDPDPS PGFFGTRALRLSEDI NP+RTFSLLYGDWG G CG+   +++Q       GTLD+EC DD  YA+LFQ
Sbjct:   75 GSGRKGGGGPPVVRPGLSEGLEGVGGGRRTRLSLLDDLQEEEGRLTSRRKKELERKK-KHRLFHFVHKMQEGVIVRRHLAHRTCDQIVLQST-------DDCRTISWKPLLAADGGAXXXXXXAISGLFQSLRRGAAGSRLSKKNRAECVKTAHIAVVLPATDPDPSQPGFFGTRALRLSEDIPNPSRTFSLLYGDWGRGHCGME--DQVQ-------GTLDLECPDDGMYAMLFQ 293
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96203.19073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIM1_ECTSI3.080e-6052.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96203contigF-distichus_contig96203:217..1800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96203.19073.1mRNA_F-distichus_contig96203.19073.1Fucus distichus monoicousmRNAF-distichus_contig96203 217..1800 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig96203.19073.1 ID=prot_F-distichus_contig96203.19073.1|Name=mRNA_F-distichus_contig96203.19073.1|organism=Fucus distichus monoicous|type=polypeptide|length=246bp
GVSESSQGISGSQSGGIGARKAASPPQVRPGLSEGLEGGGGGSRRQRLSL
LDDLQEEEGVLTNRRRKELERKKKHRLVLFVDNMREGVIVRRHLAHHTCE
QIVLQSTASFLLCFDDCRTITWKPLLAVNGGASNGGGGILGKLRKRGRVS
RRAESIMAEHIAHVLPATDPDPSHPGFFGTRALRLSEDIANPARTFSLLY
GDWGGACGVARAERLQAATGGGNGTLDVECDDDRTYALLFQVSAV*
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