prot_F-distichus_contig9616.19069.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9616.19069.1
Unique Nameprot_F-distichus_contig9616.19069.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length412
Homology
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BLAST of mRNA_F-distichus_contig9616.19069.1 vs. uniprot
Match: A0A6H5JHP7_9PHAE (HRDC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP7_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 2.200e-68
Identity = 156/379 (41.16%), Postives = 197/379 (51.98%), Query Frame = 0 
Query:   31 AVSPESPVHVVEEHWTTEWDDPKYCHKRERSRSGSFFRSDLESIEESVTDEATCAGDSSAPGSGARRSFRLEESGLTATVLEAPEEDEMGLDGDGAEGNESGDLGDLLPMDLGQNLVGNDEEPCDHLEEFGDDEDEDLWDGWGNDAPDVKGEEKTAEAAGKIVLQPRVDDASVSPEPVSTPAGVPLESQETVYNGEAPNSNDADKPSASSLQATAAGKKKNRRSKGRKGKRALKIADLPNDQKIVHTDGVRLLWKAFSRTQLATAVLWRPAPEARREDSQNDKHFRTAMQRLSPPRWNEVNMRVYEDIYLWRDRTARRMDDGVCYVCPSDILIDVALAMPKSLDELRCVSVPLSPVLGKADTPEAKELVAVVRVALGLP 409
            A SP +   +  E W +EWDDP+ CH+RERSRSGSFFR DLESI E   + A  AG  SA               + A  LE   +    ++GDGA G  +G+      +D        D               EDLW+G              +  AG +   P    A+      +T   VP + Q                P+A                              P+   +V TDG+ L+WK+ SR  +ATAVLWRP+ EA+RED+ +++HFRTA QRL PPRW+E+N+RVYEDI+LWRDRTARR+DDGV YVCP D LI+VALAMP ++D LR V+VPLSPVLG  DTPEA ELV VVR  LGLP
Sbjct:   39 ACSPAAATQLAWEPWVSEWDDPEDCHRRERSRSGSFFRPDLESIHEGARNSAFGAGLDSA---------------VAAAFLEDEGDYGCEVEGDGAIGLANGEARSFGDLD-------GDGXXXXXXXXXXXXXXEDLWEG-----------PVDSSLAGDLNSPPPEAGAAAYD---ATNTVVPEDGQ----------------PAAE-----------------------------PDPAVVVLTDGILLMWKSLSRAHVATAVLWRPSREAKREDAHSERHFRTAEQRLKPPRWSEINVRVYEDIFLWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSPVLGNGDTPEAAELVRVVRARLGLP 336
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BLAST of mRNA_F-distichus_contig9616.19069.1 vs. uniprot
Match: D7FHJ9_ECTSI (HRDC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHJ9_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 1.540e-54
Identity = 89/126 (70.63%), Postives = 108/126 (85.71%), Query Frame = 0 
Query:  283 LWKAFSRTQLATAVLWRPAPEARREDSQNDKHFRTAMQRLSPPRWNEVNMRVYEDIYLWRDRTARRMDDGVCYVCPSDILIDVALAMPKSLDELRCVSVPLSPVLGKADTPEAKELVAVVRVALGL 408
            +WK+ SR  +ATAVLWRP+ EA+ ED+ +++HFRTA QRL PPRW+E+N+RVYEDI++WRDRTARR+DDGV YVCP D LI+VALAMP ++D LR V+VPLSPVLG  DTPEA ELV VVRVALGL
Sbjct:    1 MWKSLSRAHVATAVLWRPSREAKGEDAHSERHFRTAEQRLRPPRWSEINVRVYEDIFVWRDRTARRLDDGVAYVCPGDTLIEVALAMPTTVDGLRRVAVPLSPVLGNGDTPEAAELVRVVRVALGL 126
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BLAST of mRNA_F-distichus_contig9616.19069.1 vs. uniprot
Match: A0A7S3UUB7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUB7_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 2.710e-12
Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 0 
Query:  289 RTQLATAVLWRPAPEARREDSQNDKHFRTAMQRLSPPRWNEVNMRVYEDIYLWRDRTARRMDDGVCYVCPSDILIDVALAMPKSLDELRCVSVPLSPVLGKADTPEAKELVAVVR 403
            R Q   A LW P  + +  D +  + F+ A  R    RW + +   +  +YLWRDRTAR +DDG  Y+C  + L+ VA  +P  L  LR V +PLSP LG         L+  ++
Sbjct:   32 RCQKGVARLWEPKDKCKPGDHRRQRAFKAA--RRDRRRWGDRHSAAFAALYLWRDRTARELDDGPHYLCSVETLVAVAQRLPPDLAALRSVQLPLSPALGDGGNALGAALLRTIK 144
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BLAST of mRNA_F-distichus_contig9616.19069.1 vs. uniprot
Match: D7FJC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC3_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.290e-9
Identity = 48/110 (43.64%), Postives = 58/110 (52.73%), Query Frame = 0 
Query:   31 AVSPESPVHVVEEHWTTEWDDPKYCHKRERSRSGSFFRSDLESIEESVTDEATCAGDSSAPGSGARRSFRLEESGLTATVLEAPEEDEMGLDGDGAEGNESGD---LGDL 137
            A SP +      E W +EWDDP+ CH+RERSRSGSFFR DLESI E   + A  AG  SA               +TA  LE  E+    + GDGA G  +G+    GDL
Sbjct:  189 ACSPAAATQSAWEPWMSEWDDPEDCHRRERSRSGSFFRPDLESIHEGARNNACGAGLDSA---------------VTAAFLEDEEDYGGEVVGDGAIGLANGEARRFGDL 283
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9616.19069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JHP7_9PHAE2.200e-6841.16HRDC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHJ9_ECTSI1.540e-5470.63HRDC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3UUB7_HETAK2.710e-1235.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FJC3_ECTSI2.290e-943.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.80coord: 315..410
e-value: 2.1E-11
score: 45.5
IPR002121HRDC domainPFAMPF00570HRDCcoord: 332..379
e-value: 5.5E-7
score: 29.5
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 328..411
score: 11.784
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 319..410

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.80coord: 315..410
e-value: 2.1E-11
score: 45.5
IPR002121HRDC domainPFAMPF00570HRDCcoord: 332..379
e-value: 5.5E-7
score: 29.5
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 328..411
score: 11.784
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 319..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9616contigF-distichus_contig9616:2186..3421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9616.19069.1mRNA_F-distichus_contig9616.19069.1Fucus distichus monoicousmRNAF-distichus_contig9616 1923..4965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9616.19069.1 ID=prot_F-distichus_contig9616.19069.1|Name=mRNA_F-distichus_contig9616.19069.1|organism=Fucus distichus monoicous|type=polypeptide|length=412bp
MDLEAADVLVSTSGETWHGAADVDVRGSGKAVSPESPVHVVEEHWTTEWD
DPKYCHKRERSRSGSFFRSDLESIEESVTDEATCAGDSSAPGSGARRSFR
LEESGLTATVLEAPEEDEMGLDGDGAEGNESGDLGDLLPMDLGQNLVGND
EEPCDHLEEFGDDEDEDLWDGWGNDAPDVKGEEKTAEAAGKIVLQPRVDD
ASVSPEPVSTPAGVPLESQETVYNGEAPNSNDADKPSASSLQATAAGKKK
NRRSKGRKGKRALKIADLPNDQKIVHTDGVRLLWKAFSRTQLATAVLWRP
APEARREDSQNDKHFRTAMQRLSPPRWNEVNMRVYEDIYLWRDRTARRMD
DGVCYVCPSDILIDVALAMPKSLDELRCVSVPLSPVLGKADTPEAKELVA
VVRVALGLPEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002121HRDC_dom
IPR010997HRDC-like_sf