prot_F-distichus_contig9605.19059.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9605.19059.1
Unique Nameprot_F-distichus_contig9605.19059.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length327
Homology
BLAST of mRNA_F-distichus_contig9605.19059.1 vs. uniprot
Match: D8LU55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU55_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 9.140e-85
Identity = 165/320 (51.56%), Postives = 201/320 (62.81%), Query Frame = 0
Query:   15 QKERSEARVLALSALTNACFRTASMQSETLSTGGLALAVAVLSLEGEQRKRHVPPVVAERSALLLARLSAYPPAVDAMGKQLVFERIVKATVRSAALGGNIYAPVDRSE----------SCIEGTKTSKPPPHAGERQYLVQTLAAILRSLADAANKAGTGRGISVSHLPPSNAHKGKLHEEGAKSLVTTMAVRLDLPNALVCFLPPAREQGAAGVTADSVSWRPVWYAPHEVTANVCGCLLHLLDGEGSERVAQQVINSDGISRLISLFANSGGGGCAEKTTRKNAAICLAKLARDGKIKETICHLRGMEMLVQAGAGL 324
            Q  RSEAR +AL+AL NAC    S+Q  TL+ GGLA A+A LSLEG+ R  HVPP+VA RSA LLARLS  P A++AM +  V +RI++ATVRS+ LGG++Y    R++          +  E    +    +A ER+ LV+ L +ILRS       A        S  P SN        +G   +VTT A +L L  AL+ FLPPARE G  GVT  SVS RP W AP  VT NVC CLLHLL+GEGS  +A Q++++ GI RLISLFANSGG G A  + R NAAICLAKLARD   K+ I  LRGMEMLVQ GAGL
Sbjct:    3 QAGRSEARSVALAALVNACLHNHSVQKATLAAGGLAFALATLSLEGKDRVLHVPPLVAARSAGLLARLSPLPEALEAMARPGVVDRIIQATVRSSTLGGDLYTNATRAKRVDDAADDLAAAAETEAAATSAANAAERENLVRVLGSILRSKPPVHTAACDDARRLGSPAPSSNVPGVTTTNDGKDKIVTT-ARQLKLAEALISFLPPAREDGTEGVTTTSVSLRPKWLAPPAVTGNVCVCLLHLLNGEGSGHIATQIVDAGGIPRLISLFANSGGEGGA-LSARTNAAICLAKLARDPMHKQMIADLRGMEMLVQVGAGL 320          
BLAST of mRNA_F-distichus_contig9605.19059.1 vs. uniprot
Match: A0A6H5K4G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G0_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 2.300e-82
Identity = 177/335 (52.84%), Postives = 214/335 (63.88%), Query Frame = 0
Query:    2 TPAAVLVGVAGETQKERSEARVLALSALTNACFRTASMQSETLSTGGLALAVAVLSLEGEQRKRHVPPVVAERSALLLARLSAYPPAVDAMGKQLVFERIVKATVRSAALGGNIYAPVDRSE------------SCIEGTKTSKPPPHAGERQYLVQTLAAILRSLADAANKAGTGRGISVSHLPPSNAHKGKLHEEGAKSLVTTMAVRLDLPNALVCFLPPAREQGAAGVTADSVSWRPVWYAPHEVTANVCGCLLHLLDGEGSERVAQQVINSDGISRLISLFANSGGGGCAEKTTRKNAAICLAKLARDGKIKETICHLRGMEMLVQAGAGL 324
            T AAVLV VA + + +RSEAR +AL+AL NAC    S+Q  TL+ GGLA A+A LSLEG+ R  HVPP+VA RSA LLARLS  P A++AM +  V +RI++ATVRS+ LGG++Y  V R++            +      TS    +A ER+ LV+ L +ILRS   A   A        S  P SN   G    + AK  + T A +L L  AL+ FLPPARE G  GVT  SVS RP W AP  VT NVC CLLHLLDGEGS  +A Q++++ GI RLISLFANSGG G A  + R NAAICLAKLARD   K+ I  LRGMEMLVQAGAGL
Sbjct:  799 TVAAVLVLVARDMKADRSEARSVALAALVNACLHNHSVQKATLAAGGLAFALATLSLEGKDRVLHVPPLVAARSAALLARLSPLPEALEAMARPGVVDRIIQATVRSSTLGGDLYTIVTRAKRADDEADDLAAAAAXXXXXTSAA--NATERENLVRVLGSILRSKPPAHTAACDDARRLGSPAPSSNV-PGVTTTKDAKDKIVTTAGQLKLSEALISFLPPAREDGTEGVTTTSVSLRPKWLAPPAVTGNVCVCLLHLLDGEGSGHIATQIVDAGGIPRLISLFANSGGEGGA-LSARTNAAICLAKLARDPIHKQMIADLRGMEMLVQAGAGL 1129          
BLAST of mRNA_F-distichus_contig9605.19059.1 vs. uniprot
Match: A0A835Z620_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z620_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.000e-23
Identity = 67/123 (54.47%), Postives = 75/123 (60.98%), Query Frame = 0
Query:  204 ALVCFLPPAREQGAAGVTADSVSWRPVWYAPHEVTANVCGCLLHLL-DGEG-SERVAQQVINSDGISRLISLFANSGGGGCAEKTTRKNAAICLAKLARDGKIKETICHLRGMEMLVQAGAGL 324
            ALV FLPPAR      VT DSV+  P W AP  V  NVCG LLHL+ DG G S      V  + GI RL+ LFANS  G       RKNAAIC+A+LARD  ++  I  LRGMEMLVQAG  L
Sbjct:  778 ALVSFLPPARRGAGGAVTRDSVALAPAWRAPAAVAGNVCGALLHLIGDGSGGSXXXXXXVAEAGGIERLLCLFANSEDG-----PARKNAAICVARLARDCALRPRIEALRGMEMLVQAGRAL 895          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9605.19059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LU55_ECTSI9.140e-8551.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4G0_9PHAE2.300e-8252.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z620_9STRA1.000e-2354.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 228..321
e-value: 1.6E-7
score: 32.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 20..319

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 228..321
e-value: 1.6E-7
score: 32.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 20..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9605contigF-distichus_contig9605:5610..9349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9605.19059.1mRNA_F-distichus_contig9605.19059.1Fucus distichus monoicousmRNAF-distichus_contig9605 5184..9466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9605.19059.1 ID=prot_F-distichus_contig9605.19059.1|Name=mRNA_F-distichus_contig9605.19059.1|organism=Fucus distichus monoicous|type=polypeptide|length=327bp
MTPAAVLVGVAGETQKERSEARVLALSALTNACFRTASMQSETLSTGGLA
LAVAVLSLEGEQRKRHVPPVVAERSALLLARLSAYPPAVDAMGKQLVFER
IVKATVRSAALGGNIYAPVDRSESCIEGTKTSKPPPHAGERQYLVQTLAA
ILRSLADAANKAGTGRGISVSHLPPSNAHKGKLHEEGAKSLVTTMAVRLD
LPNALVCFLPPAREQGAAGVTADSVSWRPVWYAPHEVTANVCGCLLHLLD
GEGSERVAQQVINSDGISRLISLFANSGGGGCAEKTTRKNAAICLAKLAR
DGKIKETICHLRGMEMLVQAGAGLAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold