prot_F-distichus_contig9511.18969.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9511.18969.1
Unique Nameprot_F-distichus_contig9511.18969.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length377
Homology
[Close]
BLAST of mRNA_F-distichus_contig9511.18969.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 6.940e-66
Identity = 150/298 (50.34%), Postives = 185/298 (62.08%), Query Frame = 0 
Query:   16 ISEDLFDDSE-EVSLLELDPDKLAEAMEEAGISIKVDPEGGGVDVQVLSDDVSTFLVLAPEEDFIGARFQGFIPREDGGLSALEMQGQLVDGDILTHLNGSDARLIEFSDILKACRSPDRGGLPRPLVMRFSRPEALSVPTSPAPASSAAATGKTEAGDRDSAGGDGSKTDIV------------GXXXXXXLLEELMGGLSLSGFATTPAEASQPSGGERESDVFRVELQAQGMIGGRGDARNGSGDGGRSDAAANGSDGTFKSEIASPPPPVGGEGLFMNVLRRLESIEVLGEETP 300
            +  D+ DDS+ EVSLL +D D+L   + EAGI +KVD EG  V+V VLS+DVSTFL+ APEE+++GA+  GF+PREDGGLSALEM GQL++GD+LTHLNGS+ARL++F+DILKACR PDRGGLPRPLVM+FSR EALS P SPA       T +     R  A    SKTD              G       L++ MGGLSL G      EA  P G      VFR ELQAQGM+GG GD                          +SPP    GEGLF+N+LRRLE+++V GE++P
Sbjct:   10 VDPDMDDDSDDEVSLLVVDEDELNTTLNEAGIQVKVDKEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPAXXXXXXXTAE-----RGQASAATSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPG-----GEARIP-GMSHIKGVFRAELQAQGMLGGSGDGX----------XXXXXXXXXXXXXDSSPP----GEGLFLNMLRRLENVDVAGEDSP 282
[Close]
BLAST of mRNA_F-distichus_contig9511.18969.1 vs. uniprot
Match: D7FQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI4_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 2.830e-58
Identity = 115/202 (56.93%), Postives = 140/202 (69.31%), Query Frame = 0 
Query:   19 DLFDDSE-EVSLLELDPDKLAEAMEEAGISIKVDPEGGGVDVQVLSDDVSTFLVLAPEEDFIGARFQGFIPREDGGLSALEMQGQLVDGDILTHLNGSDARLIEFSDILKACRSPDRGGLPRPLVMRFSRPEALSVPTSPAPASSAAATGKTEAGDRDSAGGDGSKTDIV------------GXXXXXXLLEELMGGLSLSG 207
            D+ DDS+ EVSLL +D D+L   + EAGI +KVD EG  V+V VLS+DVSTFL+ APEE+++GA+  GF+PREDGGLSALEM GQL++GD+LTHLNGS+ARL++F+DILKACR PDRGGLPRPLVM+FSR EALS P SPAP      T +     R  A    SKTD              G       L++ MGGLSL G
Sbjct:   13 DMDDDSDDEVSLLVVDEDELNTTLNEAGIQVKVDAEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPAPXXXXXXTAE-----RGQAAAVTSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLPG 209
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9511.18969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZQ7_9PHAE6.940e-6650.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQI4_ECTSI2.830e-5856.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9511contigF-distichus_contig9511:3505..8034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9511.18969.1mRNA_F-distichus_contig9511.18969.1Fucus distichus monoicousmRNAF-distichus_contig9511 3397..8034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9511.18969.1 ID=prot_F-distichus_contig9511.18969.1|Name=mRNA_F-distichus_contig9511.18969.1|organism=Fucus distichus monoicous|type=polypeptide|length=377bp
MTEKCADSSEEEKEDISEDLFDDSEEVSLLELDPDKLAEAMEEAGISIKV
DPEGGGVDVQVLSDDVSTFLVLAPEEDFIGARFQGFIPREDGGLSALEMQ
GQLVDGDILTHLNGSDARLIEFSDILKACRSPDRGGLPRPLVMRFSRPEA
LSVPTSPAPASSAAATGKTEAGDRDSAGGDGSKTDIVGGGGGSSLLEELM
GGLSLSGFATTPAEASQPSGGERESDVFRVELQAQGMIGGRGDARNGSGD
GGRSDAAANGSDGTFKSEIASPPPPVGGEGLFMNVLRRLESIEVLGEETP
GAVAPAAAPGVGATESLGGYGSDTGGNRKRGKKEGDPSASRGNDREDHQQ
GVRGGSDKGPSDKPRAGDGVDEGFPP*
back to top