prot_F-distichus_contig9507.18965.1 (polypeptide) Fucus distichus monoicous
|
Overview
Homology
BLAST of mRNA_F-distichus_contig9507.18965.1 vs. uniprot
Match: A0A6H5JLE2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE2_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.130e-12 Identity = 42/94 (44.68%), Postives = 53/94 (56.38%), Query Frame = 0
Query: 20 VNAQVWHRQLGHLYAQSLDILRKLEDTGTTWVSAVSDCDVCATGQATQISHPTTPNQKVHRPFQLCFGDLMGPI--PSVVIGGY-KYVSKTIDE 110
VNA WHR+LGHL A+SLDILRK TG + ++S C V + Q SHP + + RP QL D MGP+ P+ GGY Y K D+
Sbjct: 436 VNADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCAVFQIAKDKQSSHPKQSTRDLSRPGQLVVIDNMGPVNPPAKYKGGYFPYACKITDD 529
BLAST of mRNA_F-distichus_contig9507.18965.1 vs. uniprot
Match: A0A438G765_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438G765_VITVI) HSP 1 Score: 55.5 bits (132), Expect = 1.360e-6 Identity = 35/104 (33.65%), Postives = 50/104 (48.08%), Query Frame = 0
Query: 10 GAKELSMNAAVNAQVWHRQLGHLYAQSLDILRKLEDTGTTWVSAVSDCDVCATGQATQISHPTTPNQKVHR---PFQLCFGDLMGPIPSVVIGGYKYVSKTIDE 110
G K MN + ++ +WH++LGH+ Q L+IL K S C VC G+ T T N+K+ R L D+ GP+ +GGYKY ID+
Sbjct: 365 GCKRARMNLS-SSMLWHKRLGHISRQRLEILVKDGVLSNLDFSDFETCVVCLKGKMTA----KTRNEKIDRCGSTLDLIHTDICGPLTLTALGGYKYFITFIDD 463
BLAST of mRNA_F-distichus_contig9507.18965.1 vs. uniprot
Match: A0A438J3B8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J3B8_VITVI) HSP 1 Score: 53.5 bits (127), Expect = 5.680e-6 Identity = 34/104 (32.69%), Postives = 49/104 (47.12%), Query Frame = 0
Query: 10 GAKELSMNAAVNAQVWHRQLGHLYAQSLDILRKLEDTGTTWVSAVSDCDVCATGQATQISHPTTPNQKVHR---PFQLCFGDLMGPIPSVVIGGYKYVSKTIDE 110
G K MN + ++ +WH++LGH+ Q L+IL K S C VC G+ T T +K+ R L D+ GP+ +GGYKY ID+
Sbjct: 148 GCKRARMNLS-SSMLWHKRLGHISRQRLEILVKDGVLSNLDFSDFETCVVCLKGKMTV----NTRTEKIDRCGSTLDLIHTDICGPLTPTALGGYKYFITFIDD 246
BLAST of mRNA_F-distichus_contig9507.18965.1 vs. uniprot
Match: A0A507DLD9_9FUNG (DNA-directed DNA polymerase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DLD9_9FUNG) HSP 1 Score: 53.5 bits (127), Expect = 5.920e-6 Identity = 27/95 (28.42%), Postives = 48/95 (50.53%), Query Frame = 0
Query: 19 AVNAQVWHRQLGHLYAQSLDILRK---LEDTGTTWVSAVSDCDVCATGQATQISHPTTPNQKVHRPFQLCFGDLMGPIPSVVIGGYKYVSKTIDE 110
A + WHR+LGHL QS+ ++ + ++ V + C A G+AT++ P + + +L D+ GP+ +++IGG +Y ID
Sbjct: 66 AATLETWHRRLGHLNCQSIQLMARKGLVQGMEAVGVLETAPCLTFALGKATKLPLPKECSSRASEVLELVHSDVCGPMRTLIIGGARYFILFIDN 160
BLAST of mRNA_F-distichus_contig9507.18965.1 vs. uniprot
Match: A5BKE8_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BKE8_VITVI) HSP 1 Score: 53.5 bits (127), Expect = 6.650e-6 Identity = 34/104 (32.69%), Postives = 49/104 (47.12%), Query Frame = 0
Query: 10 GAKELSMNAAVNAQVWHRQLGHLYAQSLDILRKLEDTGTTWVSAVSDCDVCATGQATQISHPTTPNQKVHR---PFQLCFGDLMGPIPSVVIGGYKYVSKTIDE 110
G K MN + ++ +WH++LGH+ Q L+IL K S C VC G+ T T +K+ R L D+ GP+ +GGYKY ID+
Sbjct: 295 GCKRARMNLS-SSMLWHKRLGHISRQRLEILVKDGVLSNLDFSDFETCVVCLKGKMTV----NTRTEKIDRCGSTLDLIHTDICGPLTPTALGGYKYFITFIDD 393 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9507.18965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-distichus_contig9507.18965.1 ID=prot_F-distichus_contig9507.18965.1|Name=mRNA_F-distichus_contig9507.18965.1|organism=Fucus distichus monoicous|type=polypeptide|length=111bpback to top |