prot_F-distichus_contig107824.668.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig107824.668.1
Unique Nameprot_F-distichus_contig107824.668.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length44
Homology
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: UPI000331455A (endonuclease III-like protein 1 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI000331455A)

HSP 1 Score: 50.1 bits (118), Expect = 7.280e-6
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 0
Query:    2 EVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSSAR 36
            E+NG LVGFGQQVCQ V P C  C  R +CPS+ R
Sbjct:  240 EINGLLVGFGQQVCQPVRPRCQACLNRALCPSALR 274          
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: A0A814R155_9BILA (Endonuclease III homolog n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814R155_9BILA)

HSP 1 Score: 49.7 bits (117), Expect = 1.060e-5
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    2 EVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSSARGGDLSKP 43
            EVN  LVGFGQ+ C+ VGP CSTC  ++ICP+      +SKP
Sbjct:  280 EVNHLLVGFGQETCRPVGPKCSTCLCKNICPTGKE--SISKP 319          
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: A0A6P6DM91_OCTDE (Endonuclease III-like protein 1 n=1 Tax=Octodon degus TaxID=10160 RepID=A0A6P6DM91_OCTDE)

HSP 1 Score: 48.5 bits (114), Expect = 1.750e-5
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    1 SEVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSS 34
            SEVNG LVGFGQQ+C  V P C TC  + +CPS+
Sbjct:  155 SEVNGLLVGFGQQICLPVHPRCQTCLNKTLCPSA 188          
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: A0A0G4IW80_PLABS (Endonuclease III homolog n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IW80_PLABS)

HSP 1 Score: 48.9 bits (115), Expect = 1.910e-5
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    2 EVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSSARG 37
            +VN  +VGFGQQVC+A  P CSTC IR+ICP +  G
Sbjct:  241 QVNLVVVGFGQQVCKAPYPLCSTCAIREICPKNGVG 276          
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: A0A6P3VBU1_OCTDE (endonuclease III-like protein 1 n=1 Tax=Octodon degus TaxID=10160 RepID=A0A6P3VBU1_OCTDE)

HSP 1 Score: 48.5 bits (114), Expect = 2.360e-5
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    1 SEVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSS 34
            SEVNG LVGFGQQ+C  V P C TC  + +CPS+
Sbjct:  204 SEVNGLLVGFGQQICLPVHPRCQTCLNKTLCPSA 237          
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: UPI0004627E6A (endonuclease III-like protein 1 n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI0004627E6A)

HSP 1 Score: 48.5 bits (114), Expect = 2.600e-5
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 0
Query:    1 SEVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSSAR 36
            SE+N  LVGFGQQ C  VGP CS C  ++ICP+S +
Sbjct:  239 SEINWLLVGFGQQTCLPVGPRCSQCLNKEICPASRK 274          
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: A0A6P3F181_OCTDE (Endonuclease III-like protein 1 n=2 Tax=Octodon degus TaxID=10160 RepID=A0A6P3F181_OCTDE)

HSP 1 Score: 48.5 bits (114), Expect = 2.690e-5
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    1 SEVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSS 34
            SEVNG LVGFGQQ+C  V P C TC  + +CPS+
Sbjct:  267 SEVNGLLVGFGQQICLPVHPRCQTCLNKTLCPSA 300          
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: UPI001470EBFA (LOW QUALITY PROTEIN: endonuclease III-like protein 1 n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001470EBFA)

HSP 1 Score: 48.5 bits (114), Expect = 2.690e-5
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    1 SEVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSS 34
            SEVNG LVGFGQQVC  V P CS C  + +CPS+
Sbjct:  272 SEVNGLLVGFGQQVCLPVRPLCSICQNQHVCPSA 305          
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: A0A6P7FWL1_DIAVI (endonuclease III-like protein 1 n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7FWL1_DIAVI)

HSP 1 Score: 47.8 bits (112), Expect = 2.880e-5
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0
Query:    1 SEVNGRLVGFGQQVCQAVGPSCSTCGIRDICP 32
            SEVN  LVGFGQQ+C AV P CSTC  +++CP
Sbjct:  124 SEVNLLLVGFGQQICGAVKPQCSTCLNKELCP 155          
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Match: A0A8C7C792_NEOVI (Endonuclease III-like protein 1 n=3 Tax=Caniformia TaxID=379584 RepID=A0A8C7C792_NEOVI)

HSP 1 Score: 48.1 bits (113), Expect = 3.610e-5
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    1 SEVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSS-ARGG 38
            SE+NG LVGFGQQ C  + P C TC  R +CP++ +RGG
Sbjct:  243 SEINGLLVGFGQQTCLPIHPRCHTCLNRSLCPAARSRGG 281          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig107824.668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
UPI000331455A7.280e-662.86endonuclease III-like protein 1 n=1 Tax=Sorex aran... [more]
A0A814R155_9BILA1.060e-554.76Endonuclease III homolog n=1 Tax=Brachionus calyci... [more]
A0A6P6DM91_OCTDE1.750e-561.76Endonuclease III-like protein 1 n=1 Tax=Octodon de... [more]
A0A0G4IW80_PLABS1.910e-561.11Endonuclease III homolog n=1 Tax=Plasmodiophora br... [more]
A0A6P3VBU1_OCTDE2.360e-561.76endonuclease III-like protein 1 n=1 Tax=Octodon de... [more]
UPI0004627E6A2.600e-558.33endonuclease III-like protein 1 n=1 Tax=Anolis car... [more]
A0A6P3F181_OCTDE2.690e-561.76Endonuclease III-like protein 1 n=2 Tax=Octodon de... [more]
UPI001470EBFA2.690e-564.71LOW QUALITY PROTEIN: endonuclease III-like protein... [more]
A0A6P7FWL1_DIAVI2.880e-565.63endonuclease III-like protein 1 n=1 Tax=Diabrotica... [more]
A0A8C7C792_NEOVI3.610e-556.41Endonuclease III-like protein 1 n=3 Tax=Caniformia... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003651Endonuclease III-like, iron-sulphur cluster loop motifSMARTSM00525ccc3coord: 14..34
e-value: 0.0032
score: 26.7
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 1..37
e-value: 2.1E-9
score: 39.1
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 3..37

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003651Endonuclease III-like, iron-sulphur cluster loop motifSMARTSM00525ccc3coord: 14..34
e-value: 0.0032
score: 26.7
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 1..37
e-value: 2.1E-9
score: 39.1
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 3..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig107824contigF-distichus_contig107824:1674..1805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig107824.668.1mRNA_F-distichus_contig107824.668.1Fucus distichus monoicousmRNAF-distichus_contig107824 1674..1805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig107824.668.1 ID=prot_F-distichus_contig107824.668.1|Name=mRNA_F-distichus_contig107824.668.1|organism=Fucus distichus monoicous|type=polypeptide|length=44bp
SEVNGRLVGFGQQVCQAVGPSCSTCGIRDICPSSARGGDLSKPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003651Endonuclease3_FeS-loop_motif
IPR023170HTH_base_excis_C
IPR011257DNA_glycosylase