prot_F-distichus_contig10780.667.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10780.667.1
Unique Nameprot_F-distichus_contig10780.667.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length266
Homology
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 2.050e-78
Identity = 129/278 (46.40%), Postives = 169/278 (60.79%), Query Frame = 0
Query:   15 LTESSCAAICEDFLYFGLQYGSECWCGDSSSEIDSYDESDDCDMMCTGDSDANCGGYYAMRIFTREGSPMPVSSPTP-----------------------VMTIPDECTGTKSD---IRWASGTGFNGRMYLEDGGCGTMTDLYKNRVEKDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEYESDETCEGQPKNDFGEC 266
            +T + CA  CE   YFG +Y  EC+C  S    D   E+ +CDM C+GDS   CGG+ A++++  E  P P                             +M I   C G   D    R+A+ +G  GR+Y E  GC TMTDLY  R  ++  + KGP+Y+LDDD   +  P+ +T  WLL +EL++  G +FYC+GTS GGDC++LRIQSTGS DF+E+RGHGGSLYFE T+VTSWDTPNK PQ+ YE+GRSFLNCVSE  + + CEG  KN+ GEC
Sbjct:  314 MTAAYCADFCEGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVYMLEDGPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEISSSC-GDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGEC 590          
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 4.420e-56
Identity = 89/140 (63.57%), Postives = 109/140 (77.86%), Query Frame = 0
Query:  128 MTDLYKNR-VEKDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEYESDETCEGQPKNDFGEC 266
            MTDLY  R  EKDG + KGP+Y+LDDD   +  P+ +T  WLL +EL++  G +FYC+GTS GGDC++LRIQSTGS DF+E+RGHGGSLYFE T+VTSWDTPNK PQ+ YE GRSFLNCVSE  + + CEG  KN+ GEC
Sbjct:    1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGEC 139          
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 6.120e-55
Identity = 90/146 (61.64%), Postives = 109/146 (74.66%), Query Frame = 0
Query:  121 EDGGCGTMTDLYKNRVEKDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEYESDETCEGQPKNDFGEC 266
            E  GC T+TDLY  R  ++  + KGP+Y+LD     + +PTSVT KWLL +EL+V  G+IFYC G+  GGDCDELRIQSTG  D+ E+RGHGGS+YF  T+VTSWDTPNK PQ+ YE GRSFLNCVSE  + ETC+G  KND GEC
Sbjct:   18 ESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGEC 163          
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 1.440e-54
Identity = 90/146 (61.64%), Postives = 112/146 (76.71%), Query Frame = 0
Query:  121 EDGGCGTMTDLYKNRVEKDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEYESDETCEGQPKNDFGEC 266
            E  GC T+TDLY  R+E DG + KGPI+ LDD  + + +P  ++ KWLLT+EL +  G++FYCRG+SIGGDCDELRIQSTG  DF+E+R HGGS+YFE T+VTSWDTPNK+PQ  Y  GRSFLNCVSE  + E C GQ +N+ GEC
Sbjct:   83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGEC 227          
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 3.610e-47
Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = 0
Query:  149 ILDDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEYESDETCEGQPKNDFGEC 266
            +LDD  + + SPTSVT KWLL SEL+V  G+IFYC G+  GGDCDELRIQSTG  D+ E+RGHGGS+YF  T+VTSWDTPNK PQ+ YE GRSFLNCVSE  + ETC+G+ KND GEC
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGEC 118          
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.850e-43
Identity = 95/258 (36.82%), Postives = 143/258 (55.43%), Query Frame = 0
Query:   15 LTESSCAAICED--FLYFGLQYGSECWCGDSSSEID--SYDESDDCDMMCTGDSDANCGGYYAMRIFTREGSPMPVSSPTPVMTIPDECTGTKSDIRWASGTGFNGRMYLEDGGCGTMTDLYKNRVEKDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEYESDET--CEGQPKNDFGEC 266
            +T   C A CED  + Y+ +Q+  ECWC   ++  D  +      CD  C GDSD  CGG++A  ++      +   S TP  +    C    + +R+          Y E GGCGT+T +Y+ + E DG     P+Y+LD+++D++    + TG WLL   L V+ GS     GT+  GD D LR+ ST S DF E+RG+GG+L+F+ T VTSWDT N   ++   DGRSF+NCV++++      C+G+   ++GEC
Sbjct:   95 MTPDMCNAYCEDLGYYYYAVQWSIECWCAPETTTADELAVHGLGTCDFACGGDSDQICGGFWAFTVYE-----VGTESTTPTPSATTSCDSAAT-VRFTDDI-----AYFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGEC 332          
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 2.520e-42
Identity = 74/147 (50.34%), Postives = 102/147 (69.39%), Query Frame = 0
Query:  121 EDGGCGTMTDLYKNRVEKDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEY-ESDETCEGQPKNDFGEC 266
            + GGC T++DLY  +   +    KGP+++LD +D +  + T+ TGKWLLT++LFV  G+  YCRG  +GG+C ELRI+ST   DF E+RGHGG+LYFE T+VTSWD   + PQ+ Y+DGRSF+ CVSE    ++TC     N+ GEC
Sbjct:    7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGEC 150          
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 4.160e-38
Identity = 102/293 (34.81%), Postives = 153/293 (52.22%), Query Frame = 0
Query:    2 NRIFTEGTKGIEDLTESSCAAICEDFLYFGLQYGSECWCGDSS----SEIDSYDESDDC-------DMMCTGDSDANC---GGYYAMRIFTREGSPMPVS---------SPTPVMTIPDECTGTKSDIRWASGTGFNGRMYLEDGGCGTMTDLYKNRVEKDGWTPKGPIYILDDDD---DIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYE--DGRSFLNCVSEYESDETCEGQPKNDFGEC 266
            +R+F+  T  ++D+T   CA  C+ + +FGLQ+G E  CG       S+     +SD C         +C+    A C   G   A    +   SP P +         +PTP   +P  C  TK+ ++    T      Y + GGC T+TDLY     +DG    GP+++LD +D   D        TG+WLLTS + +   +  +  G   GGDCD LRI+STGSK + E+ GHGG++YFE T VTSWDT +K  +++Y+  +GRSF+ C+++Y+ + +C G    D G C
Sbjct:  111 DRLFSYVTT-MDDMTTELCANECKGYAFFGLQWGREAGCGTCGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXRSATPTPPTPVPSGCD-TKATVQIDKDT-----AYFKSGGCATLTDLYN---AQDG---TGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDT-SKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTC 388          
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 3.760e-33
Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 0
Query:  116 GRMYLEDGGCGTMTDLYKNRVEKDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEYESD--ETCEGQPKNDFGEC 266
            G+ Y+  GGC T+TD+Y     + G    GP+++LD +D+++    S TG WLL  ++ V  GS+    G   GGD   LRIQSTGS+D+ E+RGHGGSL F  T VTSWDT  K    +Y+  RSF+ CVSE  +D  +TC+G   N  GEC
Sbjct:  398 GKNYIRGGGCATLTDIY---TAQGGHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGEC 545          
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 7.160e-31
Identity = 68/153 (44.44%), Postives = 90/153 (58.82%), Query Frame = 0
Query:  116 GRMYLEDGGCGTMTDLYKNRVEKDGWTPKGPIYILDDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQSTGSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEYESD--ETCEGQPKNDFGEC 266
            G+ Y+  GGC T+TD+Y     + G    GP+++LD +D+++    S TG WLL  ++ V   S+    G   GGD   LRIQST S D+ E+RGHGGSL F  T VTSWDT  K    +Y   RSF+ CVSE  +D  +TC+G   N  GEC
Sbjct:  500 GKNYIRGGGCATLTDIY---TAQGGHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTASNDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYNKERSFVRCVSEELADNPDTCDGHAVNHMGEC 647          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10780.667.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC73_ECTSI2.050e-7846.40Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5KWQ2_9PHAE4.420e-5663.57MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JGU8_9PHAE6.120e-5561.64MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LRM4_ECTSI1.440e-5461.64Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FIU4_ECTSI3.610e-4767.80Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI1.850e-4336.82Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FRR8_ECTSI2.520e-4250.34Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LRN0_ECTSI4.160e-3834.81Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JNF5_9PHAE3.760e-3345.75MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LDB5_ECTSI7.160e-3144.44Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 1..80
e-value: 0.0027
score: 18.5
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 4..70
e-value: 6.1E-14
score: 52.0
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 1..80
score: 9.323
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 118..254
e-value: 2.5E-13
score: 51.6
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 14..96
NoneNo IPR availablePANTHERPTHR24269:SF19coord: 14..96

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 1..80
e-value: 0.0027
score: 18.5
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 4..70
e-value: 6.1E-14
score: 52.0
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 1..80
score: 9.323
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 118..254
e-value: 2.5E-13
score: 51.6
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 14..96
NoneNo IPR availablePANTHERPTHR24269:SF19coord: 14..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10780contigF-distichus_contig10780:7714..10061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10780.667.1mRNA_F-distichus_contig10780.667.1Fucus distichus monoicousmRNAF-distichus_contig10780 7714..10061 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10780.667.1 ID=prot_F-distichus_contig10780.667.1|Name=mRNA_F-distichus_contig10780.667.1|organism=Fucus distichus monoicous|type=polypeptide|length=266bp
SNRIFTEGTKGIEDLTESSCAAICEDFLYFGLQYGSECWCGDSSSEIDSY
DESDDCDMMCTGDSDANCGGYYAMRIFTREGSPMPVSSPTPVMTIPDECT
GTKSDIRWASGTGFNGRMYLEDGGCGTMTDLYKNRVEKDGWTPKGPIYIL
DDDDDIMYSPTSVTGKWLLTSELFVLRGSIFYCRGTSIGGDCDELRIQST
GSKDFNELRGHGGSLYFEKTLVTSWDTPNKSPQKDYEDGRSFLNCVSEYE
SDETCEGQPKNDFGEC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
IPR012334Pectin_lyas_fold