prot_F-distichus_contig10678.579.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10678.579.1
Unique Nameprot_F-distichus_contig10678.579.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length161
Homology
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BLAST of mRNA_F-distichus_contig10678.579.1 vs. uniprot
Match: A0A6H5JDS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS7_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 8.680e-12
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0 
Query:    1 MALDLRVFSRHAKRAVIGLDDVKLLARKDAKMVEKLAAFEAA-NLNLGKK 49
            +ALDLRVF++H KRAV+G+DDVK  ARKD K+VEKLA FE+A NLN GKK
Sbjct:   73 LALDLRVFAKHGKRAVVGVDDVKCAARKDPKLVEKLAGFESAMNLNAGKK 122
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BLAST of mRNA_F-distichus_contig10678.579.1 vs. uniprot
Match: D7FWQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ8_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 6.760e-11
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 0 
Query:    1 MALDLRVFSRHAKRAVIGLDDVKLLARKDAKMVEKLAAFEAA-NLNLGKK 49
            +ALDLRVF++H KRAV+G+DDVK  ARKD K+V KL  FE+A NLN GKK
Sbjct:   74 LALDLRVFAKHGKRAVVGVDDVKCAARKDPKLVGKLVGFESAMNLNAGKK 123
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BLAST of mRNA_F-distichus_contig10678.579.1 vs. uniprot
Match: A0A7S2WNE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNE5_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 4.220e-5
Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:    3 LDLRVFSRHAKRAVIGLDDVKLLARKDAKMVEKLAAFEAANL 44
            +DL+ F++HAKRA +  +DVKLLARK  ++++ L AFEAANL
Sbjct:   50 VDLKHFAKHAKRAGVSTEDVKLLARKTPRLLQDLEAFEAANL 91
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10678.579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDS7_9PHAE8.680e-1272.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWQ8_ECTSI6.760e-1168.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2WNE5_9STRA4.220e-557.14Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..63
e-value: 2.5E-9
score: 39.3
IPR029003CENP-S/Mhf1PFAMPF15630CENP-Scoord: 1..31
e-value: 1.7E-8
score: 34.7

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..63
e-value: 2.5E-9
score: 39.3
IPR029003CENP-S/Mhf1PFAMPF15630CENP-Scoord: 1..31
e-value: 1.7E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10678contigF-distichus_contig10678:6982..8038 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10678.579.1mRNA_F-distichus_contig10678.579.1Fucus distichus monoicousmRNAF-distichus_contig10678 6645..8064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10678.579.1 ID=prot_F-distichus_contig10678.579.1|Name=mRNA_F-distichus_contig10678.579.1|organism=Fucus distichus monoicous|type=polypeptide|length=161bp
MALDLRVFSRHAKRAVIGLDDVKLLARKDAKMVEKLAAFEAANLNLGKKK
TTARKKKQQQQRQPSEVGTAEASGANTGEDRRNDDSTDARKDSKSSSVMT
TSTRNGQPQAPAVGEVENVINLLEDEDDDDDFNGGEPRGGQAAGGEEGGD
SDGSSDDLLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR029003CENP-S/Mhf1