prot_F-distichus_contig105980.511.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig105980.511.1
Unique Nameprot_F-distichus_contig105980.511.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length54
Homology
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: A0A6H5KHV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHV2_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 3.190e-26
Identity = 44/47 (93.62%), Postives = 47/47 (100.00%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISP 47
            QVLNPA+DYIPPNLVDLYITNMGGLQPSY+YRLLAEYYHRD+LIISP
Sbjct:   30 QVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDELIISP 76          
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: A0A6H5JGR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR9_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.850e-25
Identity = 44/47 (93.62%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISP 47
            QVLNPA+D IPPNLVDLYITNMGGLQPSY+YRLLAEYYHRDDLIISP
Sbjct:   30 QVLNPAYDCIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDDLIISP 76          
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: D8LHD8_ECTSI (Eukaryotic translation initiation factor 2B beta subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHD8_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 5.840e-25
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHEQ 51
            +VLNPA+DYIPPNLVDLYITNMGGLQPSY+YRLLAEYYHRDDLIISPS EQ
Sbjct:  422 EVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDDLIISPSDEQ 472          
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: A0A836CBW3_9STRA (Eukaryotic translation initiation factor 2B beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.090e-19
Identity = 38/50 (76.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHE 50
            +VLNPA+DYIPP LVDLY+TN+GG QPSY+YRLLAEYYHRDD I++P  E
Sbjct:  347 EVLNPAYDYIPPELVDLYMTNIGGHQPSYIYRLLAEYYHRDDYILAPEFE 396          
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: A0A7S3XZZ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZZ5_HETAK)

HSP 1 Score: 84.7 bits (208), Expect = 1.020e-18
Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIIS 46
            +VLNPA+DYIPP L+DLYITNMGG QPSY+YRLLAEYYH +D ++S
Sbjct:  194 EVLNPAYDYIPPELIDLYITNMGGHQPSYIYRLLAEYYHHEDSVLS 239          
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: B8C5F6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5F6_THAPS)

HSP 1 Score: 76.3 bits (186), Expect = 6.970e-15
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 42
            + +NP  DYIPP L+DLY+TN+GG QPSY+YRLLAEYYH DD
Sbjct:  435 EFVNPVHDYIPPQLIDLYVTNIGGFQPSYIYRLLAEYYHSDD 476          
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: A0A7S2DRQ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRQ5_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.570e-14
Identity = 28/42 (66.67%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDD 42
            +VLNPA+D++PP L+ LY+TN GG QPSY+YRLLAE+YH  D
Sbjct:   91 EVLNPAYDFVPPELIALYVTNNGGYQPSYIYRLLAEFYHPSD 132          
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: UPI000901991A (translation initiation factor eIF-2B subunit beta isoform X4 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901991A)

HSP 1 Score: 74.7 bits (182), Expect = 2.260e-14
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHEQRA 53
            QV+NPAFDY+PPNLV L+IT+ GG  PSY+YRL+A+YY  DDL++    +QRA
Sbjct:  364 QVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLVV----QQRA 412          
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: UPI001CB9146D (translation initiation factor eIF-2B subunit beta n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9146D)

HSP 1 Score: 74.7 bits (182), Expect = 2.270e-14
Identity = 30/49 (61.22%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSH 49
             V+NPAFDY+PP LV L+IT+ GG  PSY+YRL+A+YY  DDL++ P H
Sbjct:  365 HVVNPAFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYAADDLVLQPKH 413          
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Match: A0A7S3VT33_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VT33_DUNTE)

HSP 1 Score: 70.5 bits (171), Expect = 2.410e-14
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIIS 46
             V NPAFDYIPP+L+ L+IT+ GG  PSYVYRLL EYY R+D ++S
Sbjct:   61 HVPNPAFDYIPPHLISLFITDTGGYTPSYVYRLLTEYYSREDYLLS 106          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105980.511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHV2_9PHAE3.190e-2693.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGR9_9PHAE1.850e-2593.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHD8_ECTSI5.840e-2592.16Eukaryotic translation initiation factor 2B beta s... [more]
A0A836CBW3_9STRA1.090e-1976.00Eukaryotic translation initiation factor 2B beta s... [more]
A0A7S3XZZ5_HETAK1.020e-1876.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B8C5F6_THAPS6.970e-1571.43Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2DRQ5_9STRA1.570e-1466.67Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI000901991A2.260e-1462.26translation initiation factor eIF-2B subunit beta ... [more]
UPI001CB9146D2.270e-1461.22translation initiation factor eIF-2B subunit beta ... [more]
A0A7S3VT33_DUNTE2.410e-1465.22Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042529Initiation factor 2B-like, C-terminalGENE3D3.40.50.10470coord: 1..50
e-value: 1.6E-14
score: 55.7
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 2..27
e-value: 1.1E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR45859:SF1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETAcoord: 1..44
NoneNo IPR availablePANTHERPTHR45859FAMILY NOT NAMEDcoord: 1..44
IPR037171NagB/RpiA transferase-likeSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 2..42

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042529Initiation factor 2B-like, C-terminalGENE3D3.40.50.10470coord: 1..50
e-value: 1.6E-14
score: 55.7
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 2..27
e-value: 1.1E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR45859:SF1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETAcoord: 1..44
NoneNo IPR availablePANTHERPTHR45859FAMILY NOT NAMEDcoord: 1..44
IPR037171NagB/RpiA transferase-likeSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 2..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig105980contigF-distichus_contig105980:186..347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig105980.511.1mRNA_F-distichus_contig105980.511.1Fucus distichus monoicousmRNAF-distichus_contig105980 186..347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig105980.511.1 ID=prot_F-distichus_contig105980.511.1|Name=mRNA_F-distichus_contig105980.511.1|organism=Fucus distichus monoicous|type=polypeptide|length=54bp
QVLNPAFDYIPPNLVDLYITNMGGLQPSYVYRLLAEYYHRDDLIISPSHE
QRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042529IF_2B-like_C
IPR000649IF-2B-related
IPR037171NagB/RpiA_transferase-like