prot_F-distichus_contig105838.497.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig105838.497.1
Unique Nameprot_F-distichus_contig105838.497.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length79
Homology
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: UPI000C75DDB7 (biogenesis of lysosome-related organelles complex 1 subunit 2-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75DDB7)

HSP 1 Score: 100 bits (249), Expect = 3.160e-25
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKILEKRS 77
            MN VT+TKYSDM Q T N+ +GV E+N KY +LLPYL++I+QID S++RLEQAAYKLD +  SK LE KFKILEKRS
Sbjct:   84 MNRVTLTKYSDMRQITTNIDKGVSELNKKYENLLPYLDQIDQIDESISRLEQAAYKLDAY--SKRLEAKFKILEKRS 158          
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: UPI0005C3B155 (biogenesis of lysosome-related organelles complex 1 subunit 2 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI0005C3B155)

HSP 1 Score: 91.7 bits (226), Expect = 4.940e-22
Identity = 47/76 (61.84%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKILEKR 76
            +N +TITKY+DM + TEN+S+G+ E+N KYS+L P+LE+I QID +V  LEQAAYKLD +  SK LE KFK LEKR
Sbjct:   61 LNKITITKYTDMKEFTENISRGLQELNEKYSNLHPFLEQINQIDENVTALEQAAYKLDNY--SKRLESKFKALEKR 134          
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: A0A482VUK9_9CUCU (BLOC1 2 domain containing protein n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VUK9_9CUCU)

HSP 1 Score: 90.5 bits (223), Expect = 5.430e-22
Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKILEKR 76
            MN  TITKYSDM     NVS+ ++E+N KY+SL PYL++I+QI+ SV +LEQAAYKLD  ++SK LE KFK LEKR
Sbjct:   26 MNRATITKYSDMKHIAANVSKSILELNEKYNSLQPYLQQIDQIEDSVVKLEQAAYKLD--VYSKRLEAKFKSLEKR 99          
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: A0A6J1S9Q0_FRAOC (biogenesis of lysosome-related organelles complex 1 subunit 2 n=2 Tax=Thripinae TaxID=153976 RepID=A0A6J1S9Q0_FRAOC)

HSP 1 Score: 88.6 bits (218), Expect = 9.910e-21
Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKILEKR 76
            MN  TI KYSDM Q + NVS+ + E+N KY SL PYL++I+QI+SSV +LEQAAYKLD +  SK LE KFK LEKR
Sbjct:   69 MNQATIAKYSDMKQISGNVSRTITELNEKYMSLQPYLDQIDQIESSVNKLEQAAYKLDAY--SKRLETKFKSLEKR 142          
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: K1PNI6_CRAGI (Heterogeneous nuclear ribonucleoprotein A/B n=2 Tax=Crassostrea TaxID=6564 RepID=K1PNI6_CRAGI)

HSP 1 Score: 91.7 bits (226), Expect = 6.510e-20
Identity = 47/76 (61.84%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKILEKR 76
            +N +TITKY+DM + TEN+S+G+ E+N KYS+L P+LE+I QID +V  LEQAAYKLD +  SK LE KFK LEKR
Sbjct:  402 LNKITITKYTDMKEFTENISRGLQELNEKYSNLHPFLEQINQIDENVTALEQAAYKLDNY--SKRLESKFKALEKR 475          
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: A0A6P7SK63_OCTVU (biogenesis of lysosome-related organelles complex 1 subunit 2 n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7SK63_OCTVU)

HSP 1 Score: 83.6 bits (205), Expect = 1.140e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKILEKR 76
            MN VTI KYS+M     N+S+ +VE++ KY SL PYL++I+QI+ SV+ LEQAAY+LD +  SK LE KFK+L+KR
Sbjct:   78 MNQVTINKYSEMKHIAMNISRAMVELDDKYRSLQPYLDQIDQIEESVSNLEQAAYRLDAY--SKRLESKFKMLQKR 151          
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: A0A6J2YA03_SITOR (biogenesis of lysosome-related organelles complex 1 subunit 2 n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YA03_SITOR)

HSP 1 Score: 81.6 bits (200), Expect = 5.200e-18
Identity = 43/76 (56.58%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKILEKR 76
            MN  TITKYSDM     NV + ++E+N K  SLLP L++I+Q++ SV +LEQAAYKLD  ++SK LE KF+ LEKR
Sbjct:   69 MNKATITKYSDMKHIALNVGKSILELNDKCDSLLPLLQQIDQVEDSVTKLEQAAYKLD--VYSKRLEAKFRNLEKR 142          
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: UPI00071C3091 (biogenesis of lysosome-related organelles complex 1 subunit 2-like isoform X1 n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=UPI00071C3091)

HSP 1 Score: 82.0 bits (201), Expect = 5.420e-18
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKILEKR 76
            MN V+I KYS+M     N+S+ +VE++ KY SL PYL++I+QI+ SV+ LEQAAY+LD +  SK LE KFK+L+KR
Sbjct:   85 MNQVSINKYSEMKHIAMNISRAMVELDDKYRSLQPYLDQIDQIEESVSNLEQAAYRLDAY--SKRLESKFKMLQKR 158          
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: UPI001B88B85F (biogenesis of lysosome-related organelles complex 1 subunit 2-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B85F)

HSP 1 Score: 81.6 bits (200), Expect = 6.330e-18
Identity = 45/76 (59.21%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKILEKR 76
            MN VT+TKYS+M     NV+  + E+N KY SL PYL++I+QI+ SVA LEQAAY LD +  SK LE+KFK LEKR
Sbjct:   77 MNKVTLTKYSEMKHIALNVATALQELNEKYVSLQPYLDQIDQIEESVAGLEQAAYNLDQY--SKRLEEKFKSLEKR 150          
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Match: A0A1B6DGL3_9HEMI (Uncharacterized protein n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DGL3_9HEMI)

HSP 1 Score: 80.5 bits (197), Expect = 1.400e-17
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    1 MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARLEQAAYKLDTFIFSKSLEQKFKIL 73
            MN  TITKYSDM Q   N+S+ + ++N KY  L PYL++I+QI+ SV +LEQAAYKLD +  SK LE KFK L
Sbjct:   70 MNLATITKYSDMKQIAVNISKNMTDLNEKYKLLQPYLDQIDQIEDSVTKLEQAAYKLDAY--SKRLEAKFKSL 140          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105838.497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C75DDB73.160e-2567.53biogenesis of lysosome-related organelles complex ... [more]
UPI0005C3B1554.940e-2261.84biogenesis of lysosome-related organelles complex ... [more]
A0A482VUK9_9CUCU5.430e-2261.84BLOC1 2 domain containing protein n=1 Tax=Asbolus ... [more]
A0A6J1S9Q0_FRAOC9.910e-2163.16biogenesis of lysosome-related organelles complex ... [more]
K1PNI6_CRAGI6.510e-2061.84Heterogeneous nuclear ribonucleoprotein A/B n=2 Ta... [more]
A0A6P7SK63_OCTVU1.140e-1856.58biogenesis of lysosome-related organelles complex ... [more]
A0A6J2YA03_SITOR5.200e-1856.58biogenesis of lysosome-related organelles complex ... [more]
UPI00071C30915.420e-1855.26biogenesis of lysosome-related organelles complex ... [more]
UPI001B88B85F6.330e-1859.21biogenesis of lysosome-related organelles complex ... [more]
A0A1B6DGL3_9HEMI1.400e-1757.53Uncharacterized protein n=1 Tax=Clastoptera arizon... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019269Biogenesis of lysosome-related organelles complex-1, subunit 2PFAMPF10046BLOC1_2coord: 1..71
e-value: 1.1E-17
score: 64.2
IPR019269Biogenesis of lysosome-related organelles complex-1, subunit 2PANTHERPTHR46479FAMILY NOT NAMEDcoord: 1..76

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019269Biogenesis of lysosome-related organelles complex-1, subunit 2PFAMPF10046BLOC1_2coord: 1..71
e-value: 1.1E-17
score: 64.2
IPR019269Biogenesis of lysosome-related organelles complex-1, subunit 2PANTHERPTHR46479FAMILY NOT NAMEDcoord: 1..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig105838contigF-distichus_contig105838:1372..1608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig105838.497.1mRNA_F-distichus_contig105838.497.1Fucus distichus monoicousmRNAF-distichus_contig105838 1221..1608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig105838.497.1 ID=prot_F-distichus_contig105838.497.1|Name=mRNA_F-distichus_contig105838.497.1|organism=Fucus distichus monoicous|type=polypeptide|length=79bp
MNWVTITKYSDMSQKTENVSQGVVEVNTKYSSLLPYLERIEQIDSSVARL
EQAAYKLDTFIFSKSLEQKFKILEKRSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019269BLOC1_su2