prot_F-distichus_contig104713.418.1 (polypeptide) Fucus distichus monoicous
|
Overview
Homology
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: D7FH66_ECTSI (RNA-binding S4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH66_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 5.710e-13 Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWKTVTSTSSEAR 49
VSTVEASLRLDSVASAGMGMSRSKMS AIKSG VLVNWK +S ++ R
Sbjct: 76 VSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWKAASSGTTNVR 124
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: A0A6H5J7Q1_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Q1_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 1.560e-11 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWK 39
VSTVEASLRLDSVASAGMGMSRSKMS AIKSG VLVNWK
Sbjct: 245 VSTVEASLRLDSVASAGMGMSRSKMSAAIKSGLVLVNWK 283
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: B7KD11_GLOC7 (Photosystem II S4 domain protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KD11_GLOC7) HSP 1 Score: 62.4 bits (150), Expect = 2.690e-10 Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWKTVTSTS 45
++TVEAS+RLD++ASAG GMSRSKM+EAI SG V VNWK +TSTS
Sbjct: 177 MTTVEASMRLDAIASAGFGMSRSKMAEAISSGDVRVNWKEITSTS 221
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: K9PWE0_9CYAN (Photosystem II S4 domain protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=K9PWE0_9CYAN) HSP 1 Score: 62.4 bits (150), Expect = 2.710e-10 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWKTVTSTS 45
++TVEASLRLD++ASAG+GMSRSKM++AI G V VNWKT+T TS
Sbjct: 178 LTTVEASLRLDAIASAGLGMSRSKMADAISKGNVKVNWKTITQTS 222
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: A0A836CE46_9STRA (S4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE46_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 5.640e-10 Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWKTVTSTSSEAR 49
V++VEASLRLD++ASAGMGMSRSKM++AIKSG V VNW+ SSE +
Sbjct: 189 VTSVEASLRLDAIASAGMGMSRSKMADAIKSGMVFVNWREAKGPSSEVK 237
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: A0A6P0XXH7_9CYAN (Photosystem II S4 domain protein n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0XXH7_9CYAN) HSP 1 Score: 61.2 bits (147), Expect = 7.190e-10 Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWKTVTSTS 45
++TVEAS+RLD++ASAG+GMSRSKM+EAI SG V VNWK VT S
Sbjct: 177 ITTVEASMRLDAIASAGLGMSRSKMAEAINSGDVRVNWKAVTQAS 221
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: B1XMP5_SYNP2 (S4 domain protein n=10 Tax=Synechococcus TaxID=1129 RepID=B1XMP5_SYNP2) HSP 1 Score: 60.5 bits (145), Expect = 1.320e-9 Identity = 31/45 (68.89%), Postives = 40/45 (88.89%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWKTVTSTS 45
++TVEASLRLD++ SAG+GMSR+KM+EAI SG V VNWKT+T +S
Sbjct: 171 LTTVEASLRLDAIGSAGLGMSRTKMAEAIASGNVRVNWKTITQSS 215
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: A0A7S3UWV6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWV6_HETAK) HSP 1 Score: 59.3 bits (142), Expect = 1.570e-9 Identity = 31/49 (63.27%), Postives = 40/49 (81.63%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWKTVTSTSSEAR 49
V +VEASLR D+V SAGMG+SRSKM++ IKSG VL+NWK ++ST E +
Sbjct: 98 VQSVEASLRADAVISAGMGVSRSKMADMIKSGDVLINWKEISSTKKEVK 146
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: UPI001BDD68C1 (photosystem II S4 domain protein n=1 Tax=Synechococcus sp. LA31 TaxID=2741953 RepID=UPI001BDD68C1) HSP 1 Score: 59.7 bits (143), Expect = 2.730e-9 Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWKTVTSTSSE 47
+++VEASLRLD+VASAGMGMSRS+MS+ I+SG V VNW+ +TS S E
Sbjct: 182 LNSVEASLRLDAVASAGMGMSRSRMSDLIRSGAVRVNWQVITSPSRE 228
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Match: A0A2T1EPK3_9CYAN (Photosystem II S4 domain protein n=2 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A2T1EPK3_9CYAN) HSP 1 Score: 59.3 bits (142), Expect = 3.690e-9 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0
Query: 1 VSTVEASLRLDSVASAGMGMSRSKMSEAIKSGTVLVNWKTVTSTS 45
++TVEASLRLD++ASAG GMSRSKM+E I SG V VNWK +TS S
Sbjct: 177 LTTVEASLRLDAIASAGFGMSRSKMAELINSGDVRVNWKEITSAS 221 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig104713.418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
Analysis Name: InterProScan on OGS1.0 Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-distichus_contig104713.418.1 ID=prot_F-distichus_contig104713.418.1|Name=mRNA_F-distichus_contig104713.418.1|organism=Fucus distichus monoicous|type=polypeptide|length=49bpback to top |