prot_F-distichus_contig1047.416.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig1047.416.1
Unique Nameprot_F-distichus_contig1047.416.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length613
Homology
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: D7FR51_ECTSI (DNA topoisomerase VI subunit B-like protein Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR51_ECTSI)

HSP 1 Score: 891 bits (2302), Expect = 0.000e+0
Identity = 469/609 (77.01%), Postives = 524/609 (86.04%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGMDNRDIVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKGKGET--LYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGCSTDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAELGAGFEPKMNPADLTVKMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLETKVKEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQERAQ--ANGKGSGAS-KSKRAREPESAAWRVMAALSNNDLTEKTLAAGLGAAVNQHDAEAVKEEISTVGRGNYSRQV 604
            GKSLYTTIRE VENSLDAAESIG LP +SLT+EEFTE EFNEHRGMDNRD+VDAGLF KASGGKK+ +K++KA  K  +  E          A DP  Q+ S    + A+  +P     ++DKKG+ KG++  LYYRVKCKDNGVGMPH KIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQV+SGCS+D +  P+FL+KCVLDIDIYKN+PSVHEH+KLPNPEGWRGTEMTVCVSGNWQTYK+RVLQYLQQLAIITPYA+LELEYH HANPKKDLTAVYRRRS+QMPPLAYEVKHHPGSVNNLLVQQLIHR +CKDLVGFL K+LSSIDRPL+ERIIAELG GF PKM P+ LTVKMVSRLTQML+DVKRFKPPDG CL+    ++L  +VKEG+NVYRFANRIPLLFEAGSDVVTRVA KR+NWS YK+DHKRDKIGVFVSTVSTK+PFKGTSKEYIGDDTEEI++AVKHALQQCCQQLR HL+RRNALR+Q+ERKKVLTKYIPDVSRAVFGLLTAMQ+RA+     KG GA   SKRAR   +A  ++MA+L + ++TEKTLAAGL AAVNQHDAEA KEE    GRG +SRQV
Sbjct:   31 GKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEEEFNEHRGMDNRDVVDAGLF-KASGGKKSTSKATKALPKPAVAEE--------GSADDP--QEPSAAAGATAADLDPKEKKAKNDKKGRSKGDSHSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSSDVKDPPNFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEMTVCVSGNWQTYKSRVLQYLQQLAIITPYAELELEYHSHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRTKCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMQPSALTVKMVSRLTQMLRDVKRFKPPDGACLSPAGEYNLR-QVKEGVNVYRFANRIPLLFEAGSDVVTRVAMKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCQQLRTHLLRRNALREQKERKKVLTKYIPDVSRAVFGLLTAMQKRARDGEEDKGGGAGGASKRAR-GATAKTQIMASLDSKEVTEKTLAAGLSAAVNQHDAEAAKEESVAAGRGTHSRQV 626          
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: W7U7C7_9STRA (Dna topoisomerase 6 subunit b n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7C7_9STRA)

HSP 1 Score: 536 bits (1380), Expect = 6.220e-180
Identity = 292/570 (51.23%), Postives = 368/570 (64.56%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGMDNRDIVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKG-KGETLYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGCSTDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAELGAGFEPKMNPADLTVKMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLETKV-------------------------------------KEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQER 532
            G+SLYTT+RE VEN+LDAAESI  LP VS+ +EE TE E NE RGM++R+ VD GLF KA+G +++               E++       + A+  K+     H SDA       N      K KG +G   YYRV C+DNG GM H KIPDMLG VLSSSKYGVRQ RGK+G+G+KMALIWSKKSTGLPI+V S  S ++     ++S CVLDIDIY+NQP V  H K+ N +GWRGT + V V GNW TYK  ++ Y QQLAIITPYA +E  +   +N  +++   Y RRS+ MPP A EVKHHP S+N+L++QQLI R   K  + FL  EL+ + RPLA RI+ ELG GF   M P D+      RLT MLK +  FK PDG CL+    ++L   +                                     K+GINVYRFANRIPLLFEAG+DVVT+VA +R+NW  YKID KRD+IGVFVS VSTK+PFKGT KEYIGDDTE IR++VK ALQ+CC+QL+ HL+ RNA RD +ERK+ L +Y+PDVSRA+  +L ++ +R
Sbjct:   32 GRSLYTTVRELVENALDAAESIQELPYVSVVIEEITEDELNELRGMESRERVDLGLFHKATGKRRSGG-------------EIQ------EVLAENMKE----LH-SDALEKQMGQNSAALSNKKKGDRGARNYYRVTCEDNGCGMAHEKIPDMLGRVLSSSKYGVRQTRGKFGLGSKMALIWSKKSTGLPIEVRSAHSLEENHPAAYISHCVLDIDIYRNQPFVKLHEKVANIKGWRGTRIDVVVEGNWSTYKTHIMTYFQQLAIITPYAHMEFTFRTLSNASREVITQYARRSEHMPPPAQEVKHHPSSINHLIIQQLIKRTSTKTFLNFLCTELACVTRPLAARIVKELGNGFAENMVPEDIDANKTIRLTSMLKSISIFKLPDGSCLSPAGEYNLRLGIMKELHPDYVATVSEQAAAFEGHPFVVEAGVSLGGNALKDGINVYRFANRIPLLFEAGNDVVTQVANRRINWQSYKIDPKRDRIGVFVSIVSTKIPFKGTGKEYIGDDTEAIRKSVKSALQRCCKQLKQHLLTRNAARDVKERKRSLLRYMPDVSRAIAAVLNSINKR 577          
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: A0A7S2XJE4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJE4_9STRA)

HSP 1 Score: 526 bits (1355), Expect = 4.090e-176
Identity = 303/596 (50.84%), Postives = 378/596 (63.42%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGM----------DNRD-IVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKGKGETLYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSG-CSTDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEG--WRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAEL-----GAGFEPKMNPADLTVKMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLETKV-------------------------------------KEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQERAQANGKGS 540
            GKSLYTT+RE +ENSLDA ES+ VLP +S+T+EE T+++FN+ RG+          DN D I D  LF K         KS+K KSK+         TG            G+   P+D  +  P+   + S KK +      Y+ +  +DNG GM H  IP++LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI + +   + DQ    +F+SKCVLDIDIYKN+P V EH K PN     W GTE  V ++GNW TYK+RV+QYLQQLAIITPYA LEL Y   ++ K+     Y RRS+QMPP + EVKHHP SVNNLL+QQL+ R  CK  + FL  ELSSI   LA+R+IAEL      A F+  M+PAD+T K ++ L QML+ V+ FK PDG CL+ +  ++L   +                                     KEGIN+ RFANRIPLLFE G+DV TRVA  ++ WSLYKIDHKRDKI VFVS VSTKVPFKGT KEYIGDD  EI+ +VK ALQ CCQQLR HL +RNALRD+RER+  L KY PDVSR++FG+L  M++R + +  GS
Sbjct:   41 GKSLYTTLRELIENSLDACESVNVLPNISVTIEEMTQSQFNKVRGLKTSSSAENGFDNDDGIKDIDLFMK---------KSNKRKSKS---------TG------------GASEAPTDPVSGAPEE--VGSTKKKRKANAEAYFHITVRDNGCGMSHEAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPITITTAHMNNDQGTPGEFISKCVLDIDIYKNRPRVIEHSKQPNNSDSPWIGTEFQVLIAGNWTTYKSRVVQYLQQLAIITPYAMLELNYTNASDAKRSFGIRYERRSEQMPPPSKEVKHHPSSVNNLLIQQLLERSRCKTFLKFLCTELSSISPSLAKRLIAELKGTQSDAEFDEDMSPADVTDKQITILVQMLRSVELFKAPDGSCLSPLGEYNLNLGIQKVIEPDLIATARDRPSAYEGHPFIVEAAVSLGGSDAKEGINIVRFANRIPLLFEGGADVATRVAQSKIKWSLYKIDHKRDKINVFVSIVSTKVPFKGTGKEYIGDDITEIQTSVKRALQSCCQQLRAHLTKRNALRDERERRSRLVKYAPDVSRSIFGILEVMRKRKEEDVDGS 604          
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: A0A6V2BFB6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BFB6_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 1.140e-171
Identity = 307/669 (45.89%), Postives = 392/669 (58.59%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGMDNRDIVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKGKGETLYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGC----------STDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAELGAGFEPKMNPADLTVKMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLETKV-------------------------------------KEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQERA--QANGKGSGASKSKRAREPESAAWR-----------VMAALSNNDLTEKTLAAGLGAAVNQHDAEAVKEEISTVGRGNYSRQVRAREG 609
            GKSLYTT+RE +ENSLDA ES+ VLP++ L +EE ++++FN  RG+            K  G  +T                       G  A  P   D   T     S+     N     KK     E+ Y+ +  +DNG GM H  IP++LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ +            S D  +    +S CVLDIDIYKN+P V EH K+PN EGW GT   V ++GNW TYK+R++QYLQQLAIITPYA+LE+ Y    + KKD+   Y RRS+QMPP A EVKHHP SVNNLLVQQL+ R +CK ++ FLS +LSS+   LA+RII EL    +  M+PAD+  K ++R+ Q+L+   +FK PDG CL+ +  ++L   +                                     KEGI V RFANRIPLLFEAG+DV TRVA  ++ WS YKIDHKRDKIGVFVS VSTKVPFKGT KEYIGDD  EI+ +VK ALQ CCQQLR HL +RNALRDQRER+  L KYIPDVSR++FG+L  M++R   + NG  +  S  KR    ++   R           ++  L  + +TEK + + L  A+  H A    +  S  G G  S   + R G
Sbjct:   57 GKSLYTTVRELIENSLDACESVNVLPDIQLNIEEMSQSQFNVLRGV----------TVKKLGNNET-----------------------GTNAPVPDDSDAMTTTQGQKSS-----NKSNETKKSNRSAES-YFLISVRDNGCGMAHDAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIKIKTSHFGASDHKRHESGDDNRFGQEISTCVLDIDIYKNRPRVIEHTKVPNKEGWVGTLFEVLIAGNWTTYKSRIVQYLQQLAIITPYAKLEMRYSNRFDAKKDMAIRYDRRSEQMPPPAREVKHHPSSVNNLLVQQLLERSKCKTILKFLSTDLSSVTPALAKRIIDELDDDLDESMSPADVNDKQITRIVQLLRGSDQFKSPDGSCLSPLGEYNLNLGIRKVIEPEVVATARDRPGAYEGHPFIVEAAVSLGGKGAKEGITVVRFANRIPLLFEAGADVATRVAQSKIKWSSYKIDHKRDKIGVFVSIVSTKVPFKGTGKEYIGDDITEIQLSVKRALQSCCQQLRTHLAKRNALRDQRERRSRLVKYIPDVSRSIFGILDTMRKRKLDEMNGGSTSLSPKKRLGRSQNTPIRSEDDVDKKKAGIIEKLEKDIITEKIIESHLLDAIESHGAI---DGQSASGTGTESSSGKGRFG 683          
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: B7G6Z7_PHATC (Type II DNA topoisomerase 6 subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6Z7_PHATC)

HSP 1 Score: 501 bits (1289), Expect = 7.070e-167
Identity = 298/645 (46.20%), Postives = 397/645 (61.55%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGMDN--RDIVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKGKGETLYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGCSTDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAELGAGFEPKMNPADLTVKMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLET-------------------------------------KVKEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQER-AQANGKGSGASKS--KRAREPESAAWRVMAALSNNDLTEKTLAAGLGAAVNQHDAEAVKEEISTVGRGNYSRQ 603
            GKSLYT++RE VENSLDA ESI  LPE+S+ ++E+T+ EFN    M    R   D  LF      KK P +++          +V+  T   N                             S KK K   +  Y+++  KDNG GM H+ IP++LG VLS SKYGVRQ RGK+G+GAKMALIW+KKSTG PI++++    D   AP+  S CVLDIDIYKN P + EH    N +GW GTEM+V ++GNW TYK+R++QYLQQLAIITPYA LEL Y   ++ K++L   Y RRSDQMPP A  +KHHP SVNNL++QQLI   + + L  FLS ELS++  PLA R++ ELG  F+  M P+ L  K ++RL Q+L+ V+ FK PDG CL+ +  ++L                                       +VKEGI V RFANRIPLLFE G+DV TRVA  ++ WS YK+D+KRD+IGVFVS VSTKVPFKGTSKEYIGDD  EI+++VK ALQ CCQQLRG+L +R+AL+D + RK  + KY+PDV R++FG+L +M+ R A+ +   +  S+S  KR R   SAA  ++  L+  ++TE++LAA L  ++   D +   +E  T  +G+   Q
Sbjct:   39 GKSLYTSLRELVENSLDACESIHELPEISIEIKEYTQEEFNALDVMKTSPRKKRDMQLFETKKKDKKPPKEAT----------DVDEITTVEN-----------------------------SGKKRKKAPQDAYFKLTVKDNGCGMSHSAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWAKKSTGQPIRIMTSHRPDGGVAPERASACVLDIDIYKNAPRILEHTTRKNTDGWMGTEMSVLIAGNWTTYKSRIVQYLQQLAIITPYAVLELAYINISDSKRNLHVRYDRRSDQMPPPAKTIKHHPASVNNLVIQQLIQFTKTRTLFKFLSTELSTVSPPLARRLVTELG--FDESMPPSSLEDKEITRLVQLLRQVQLFKAPDGSCLSPLGEYNLNLGIRKVLEPDLIATSRDKPGAYEGHPFLVEAAVSLGGKEVKEGITVIRFANRIPLLFEGGADVATRVANTKIRWSNYKMDYKRDRIGVFVSIVSTKVPFKGTSKEYIGDDATEIQQSVKRALQSCCQQLRGYLAKRSALKDAQTRKSRMAKYVPDVGRSLFGILDSMRARQAELSLPEAPPSQSPTKRLRLDRSAAQLMIERLNRGEVTEQSLAAKLTESI---DDQLNVQEEGTDDKGSAPTQ 639          
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: A0A7S2S2M8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M8_9STRA)

HSP 1 Score: 501 bits (1289), Expect = 4.500e-166
Identity = 294/640 (45.94%), Postives = 385/640 (60.16%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGMDNR-DIVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKGKGETLYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGCSTDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCH---------------------ANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAELGAGFEPKMNPADLTV--KMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLE--------------------------------------TKVKEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQERAQANGKGSGASKSKRAREP-ESAAW-----RVMAALSNNDLTEKTL 572
            GKSLYT+IRE VENSLDAAES+ VLP++ LT+ E +EA+FN  RG+    +  D  LF    G      K SK+K    ++ + +G     +L+        SL                        + + +YYRV CKDNG GMPH  IP+MLG VLS SKYGVRQ RGK+G+GAKMALIW+KKSTGLPI+V S  + D  + P  +S+CVLDIDI++N+P V  H K  NP+GWRGTE+TV V GNW +Y+++V+ Y QQLA+ITPYA L+L+++                       ++  ++L   Y RRSDQ+PPL  EVKHHP SV+NLL+QQL+ R + K LV FL ++L  +   +AER+ AELG   E  + P D+    K V+ +TQ+L+DV  FK PDG CL+    ++L                                       +K KEGI VYRFANRIPLLFE GSDV TRVA K++ W+ YKID K+D+IGVFVS VSTK+PFKGTSKEYIG+D E +  AVK  LQ C  QLR HLMRR   RD + RKK LTKYIPDVSR++FG+L  +  R +A    S +S  KR R+  E+  W      V++A+++   T+K +
Sbjct:   30 GKSLYTSIRELVENSLDAAESLCVLPDIELTITELSEAQFNAQRGVKTAGNRGDLELF----GSSTKKGKGSKSKEGGSVEAQDDGVEEGADLSQ-------SLXX---XXXXXXXXXXXXXXXXAGSRSQVMYYRVTCKDNGCGMPHQAIPEMLGRVLSGSKYGVRQTRGKFGLGAKMALIWAKKSTGLPIEVRSAHTKDASEPPRSVSECVLDIDIHRNEPQVQRHTKQANPDGWRGTEITVTVGGNWTSYRSKVVSYFQQLAVITPYADLKLKFNSEGSSADGSTPLSPGLGVTESSTSSSARNLEVHYSRRSDQIPPLPSEVKHHPSSVDNLLIQQLLVRTKSKSLVSFLQRDLQGVTSGVAERVAAELGDWAEDTL-PQDIATNNKRVNAITQVLRDVTLFKSPDGSCLSPAGEYNLRLGIQKEVAPDLVATHTMKRAAAHEGHSFLVEAGVSIGGSKAKEGITVYRFANRIPLLFEQGSDVTTRVANKKIKWASYKIDQKKDRIGVFVSIVSTKIPFKGTSKEYIGEDVEPLHEAVKKCLQACATQLRHHLMRREQQRDAQNRKKNLTKYIPDVSRSLFGVLNRVYTRDKAKVPNSASSPRKRGRDAGEADHWLPSKRTVLSAIASGSFTKKIM 654          
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: A0A1E7FFR2_9STRA (Topo-VIb_trans-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFR2_9STRA)

HSP 1 Score: 498 bits (1282), Expect = 1.580e-165
Identity = 289/637 (45.37%), Postives = 388/637 (60.91%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGMDNRDIVDAGLFTKASG-GKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKGKGETLYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGCSTDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAELGAGFEPKMNPADLTVKMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLETKV-------------------------------------KEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQERAQANGKGSGASKSKRAREPESAAWR--------VMAALSNNDLTEKTLAAGLGAAVNQHDAEAVKEE 591
            GKSLYT+IRE VENSLDA ESIGVLP + + +EE  + EFN+ RG+      D  LF +  G G  +    S AK K   K  V G+ G  +  + P+K                        KK   +G   Y+++K KDNG GM H KIPD+LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ +  S         +S CVLDI+I  N P++ +H K  N   W GTE+ + ++GNW TY++R++ Y QQLAIITPY QLEL Y   + P++++T  + RRS+QMPPL  E+KHHP SVNN++V QLI R  CK ++ FL+KELS + RPLA+RI+ E G   +  +NP+D+T + +++L Q+L+ VK FK PDG CL+ +  ++L   +                                     K+G+NV RFANRIPLLFE G+DV TRVA  ++ WSLYKID KRD+IGVFVS VSTK+P+KGT KEYIGDD  EI  +VK A+Q CCQQLR HL++RNALR+Q++R+  L KYIPDVSR+++ LL  M++R + +  G     S R R  +   W+        V+  L   ++T   L   L  AV+  +    +EE
Sbjct:   40 GKSLYTSIRELVENSLDACESIGVLPTIQVYIEELNQDEFNKIRGISVA-TKDVELFQQKGGKGNSSAGAVSSAKKK---KAGVNGSGGN-DKDSKPTKT---------------------PRKKASQEG---YFQLKVKDNGCGMNHEKIPDLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIKITTAHS---------VSICVLDINITNNCPNIIQHTKSKNTTEWVGTELELLIAGNWTTYRSRIVSYFQQLAIITPYCQLELVYENRSEPQRNMTLRHDRRSEQMPPLPREIKHHPSSVNNIIVSQLIERSNCKTIIDFLTKELSCVTRPLAQRIVTECGWDEDDIVNPSDMTSRQLTKLVQVLRTVKMFKAPDGSCLSPLGEYNLNLGIRKVLEPEFVATARDKPSAYEGHPFLVEAAVSLGGKEAKDGLNVVRFANRIPLLFEGGADVCTRVANNKIKWSLYKIDQKRDRIGVFVSIVSTKIPYKGTGKEYIGDDITEISVSVKKAIQSCCQQLRVHLLKRNALRNQKDRRSKLVKYIPDVSRSLYTLLDGMRKRREEHPSGDDPMSSPRKRPRQEQQWQGQRKHVDSVLGLLEKGEITASVLKKRLEEAVDVQNLVEEEEE 638          
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: A0A1Z5KK08_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK08_FISSO)

HSP 1 Score: 485 bits (1249), Expect = 6.870e-161
Identity = 285/631 (45.17%), Postives = 382/631 (60.54%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGM---DNRDIVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKGKGETLYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGCSTDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAELGAGFEPKMNPADLTVKMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLETKV-------------------------------------KEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQERAQ---ANG--KGSGASKSKRAREPESAAWRVMAALSNNDLTEKTLAAGLGAAVNQHDAE 586
            GKSLYT+IRE VENSLDA ES  +LPE+S+ V E+T+ EFN+  G+     ++  D  LF K +   KTP            KP  E                  LT  ++ S+T          KK K   +  Y+R+  +DNG GM H  IP +LG VLS SKYGVRQ RGK+G+GAKMALIWSKKS+G P+++ +         P   S CVLDIDI KN+P + EH K  N + + GT M + ++GNW TY++R++QY+QQLAIITPYA L+L+Y   + P+++L   Y+RRS+QMPP A  VKHHP SVNN++VQQLI     K LV FLS EL+S+   +A+R+I EL    + +M+P +LT   ++RL Q+LK V+ FK PDG CL+ +  ++L   +                                     KEGI V RFANRIPLLFE+G+DV TRVA  ++ WS YKID KRDKIGV+VS VSTK+PFKGTSKEYIGDD  EI+++VK ALQ CCQQL+ HL++R AL+D +ER   L KYIPDVSR++ G+L  M++R +    NG  + S AS SKR R     + +++  L + ++ E  +   L  A+  H  +
Sbjct:   35 GKSLYTSIRELVENSLDACESANILPEISVHVTEYTQKEFNKIAGLAESPRKNANDRELFHKKT---KTP-----------KKPPTES----------------QLTQETNESST----------KKRKTASQDAYFRIVVQDNGCGMEHNAIPHLLGKVLSGSKYGVRQTRGKFGLGAKMALIWSKKSSGQPVRIQTAHRRSGTDIPTHCSVCVLDIDISKNEPIIMEHTKYVNKDNFIGTRMELLIAGNWTTYRSRIVQYIQQLAIITPYAYLQLDYENISEPQRNLQLQYQRRSEQMPPPAATVKHHPSSVNNIIVQQLIQMTRAKTLVKFLSTELASVSPAMAKRLIGELNE-VDEEMDPRELTDAHITRLVQLLKRVEIFKAPDGSCLSPLGEYNLNLGIQFVQKPDLIATARDKPAAYEGHPFLVEAAVSLGGKTMKEGITVVRFANRIPLLFESGADVSTRVANSKIKWSSYKIDFKRDKIGVYVSIVSTKIPFKGTSKEYIGDDATEIQQSVKRALQSCCQQLKVHLVKRTALKDAKERSNRLRKYIPDVSRSLHGILEGMRKRREEGDVNGDEQTSTASPSKRLRLDPHRSSQMIQKLRSGEMNEALITKALNQAIRDHQPQ 624          
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: B8BZH3_THAPS (Topoisomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZH3_THAPS)

HSP 1 Score: 479 bits (1233), Expect = 6.860e-159
Identity = 280/570 (49.12%), Postives = 347/570 (60.88%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGMDNRDIVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKGKGETLYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGCSTDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAELGAGFEPKMNPADLTVKMVSRLTQMLKDVKR-FKPPDGGCLTEVKHFDLETKV-------------------------------------KEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQER 532
            GKSLYTT+RE VENSLDA ES+ VLP++S+ +EE T+ +FNE RG+              SGG   P K  K          V+G+             D ++                   KK +  G+  Y+ V  +DNG GM H  IPD+LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ +              K +  IDIYKN P + EH +  N E W GTEM V VSGNW TYK+RV+QYLQQLAIITPYA+LE+ Y   ++ KK +   + RRS+QMP  A EVKHHP SVNNLLVQQL+   + K L+ FL+ +LS I   +A+R+I  LG  FE  M+PA++  K ++RL Q+L+     FK PDGGCL+ +  ++L   +                                     KEGI V RFANRIPLLFE G+DV TRVA  ++ WS YKIDHKRDKIGVFVS VSTKVPFKGT KEYIGDD  EI+ +VK ALQ CCQQLR HL +RNALRD +ERK  L KYIPDVSR++FG+L  M +R
Sbjct:   36 GKSLYTTLRELVENSLDACESVDVLPDISVVIEEMTQDQFNEMRGVPT------------SGG---PGKKKKG---------VDGS------------DDAAVGDAXXXXXXXXXXXXXXXAKKRRAGGDA-YFLVTVRDNGCGMAHDAIPDLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIRIKTSHV-----------KGIYIIDIYKNCPRIIEHKQKDNTENWIGTEMQVLVSGNWTTYKSRVVQYLQQLAIITPYARLEMSYSNRSDEKKGMNLRFERRSEQMPSQAREVKHHPSSVNNLLVQQLLENSKSKTLLKFLTGDLSGISPSVAKRLIERLGDAFEEDMSPAEMDDKQITRLVQLLRSTDDLFKSPDGGCLSPLGEYNLNLGIQKVVEPEIIATARDKPGAYDGHPFIVEAAVSLGGKEAKEGITVVRFANRIPLLFEGGADVATRVANSKIKWSSYKIDHKRDKIGVFVSIVSTKVPFKGTGKEYIGDDITEIQLSVKRALQNCCQQLRVHLAKRNALRDVKERKSRLLKYIPDVSRSLFGILEGMHKR 557          
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Match: A0A7S3LRB3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRB3_9STRA)

HSP 1 Score: 476 bits (1225), Expect = 5.430e-157
Identity = 271/647 (41.89%), Postives = 372/647 (57.50%), Query Frame = 0
Query:    1 GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGMDNRDIVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQDGSLTHPSDASATNPDWNGIQSDKKGKGKGETLYYRVKCKDNGVGMPHAKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGCSTDQEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQTYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPLAYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAEL----GAGFEPKMNPADLTVKMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLE-------------------------------------TKVKEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGVFVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNALRDQRERKKVLTKYIPDVSRAVFGLLTAMQERAQANGKGSGASKSKRAREPESAAWRV----MAALSNNDLTEKTLAAGLGAAVNQHDAEAVKEEISTVGRGNYSR 602
            GK+LYTT+RE VENSLDAAESI  LPEV L + E +   F++ +G+  +D VD  L+     GKK                                                            K +G   Y+++ CKDNG GM H +IPDM G VL+ SKYGV+QARGK+G+GAKMALIWSKKSTGLPI++ S  + + +++ DF++ C+LDIDI+KN+P++  H K+PN E W G+E+ V +SGNW+TYK+RVL Y++ LA+ITPYA   LE+ C  NPKK  T  YRRRS+QM  LA EVKHHP SV+NL+V+QL++  + K L   L  +L  I++PLA+R+I EL       F+     + +  + V +LT ML D   F PPD  CL+    ++L                                       K K G+ +YRFANRIPLLFE G+D+V   A +RV WS YKI+HK DK+GVFVS VSTK+PFKGT KEYIGDD  E+  +VK A+ +CC QL+  L  R   RD   R + L KY+PD SRA+FG+L+AM+E  +ANG       +KR +  +    +V    ++ +S+ ++T+ ++++ L  A+ Q D     E+ +  GRG  SR
Sbjct:   50 GKALYTTVRELVENSLDAAESIRTLPEVHLKITELSNKSFSQAQGLSVQDRVDKALYRGKKKGKKXXXX---------------------------------------XXXXXXXXXXXXXXANSKSQGSQKYFKLVCKDNGCGMKHERIPDMFGRVLAGSKYGVKQARGKFGLGAKMALIWSKKSTGLPIEIKSSHTNNPDESSDFITHCILDIDIHKNEPNIRVHEKVPNDEAWHGSEVAVTISGNWKTYKSRVLNYMELLAVITPYAHFTLEFICEDNPKKSFTMDYRRRSEQMCKLAKEVKHHPKSVDNLIVRQLLNMTKKKTLEQCLCSDLQGINKPLAKRLIDELEQLTDQNFDRDTLCSRIDTRTVQQLTAMLNDTNVFAPPDSRCLSPAGEYNLRLGIMKQFQPDLVATYTSKPGSYNGHPFVVEAAVAFGGAKGKPGLTIYRFANRIPLLFEPGNDIVNIAANRRVKWSSYKINHKTDKVGVFVSIVSTKIPFKGTGKEYIGDDVTEMAESVKTAISRCCLQLKSKLTARRLERDHAARARNLAKYVPDCSRALFGVLSAMKEGYEANG-------AKRRKVEDGVIDKVKTEMISKMSSGEVTQASISSKLIEAIEQADHAMALEQATKRGRGQASR 650          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1047.416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR51_ECTSI0.000e+077.01DNA topoisomerase VI subunit B-like protein Topois... [more]
W7U7C7_9STRA6.220e-18051.23Dna topoisomerase 6 subunit b n=1 Tax=Nannochlorop... [more]
A0A7S2XJE4_9STRA4.090e-17650.84Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6V2BFB6_9STRA1.140e-17145.89Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B7G6Z7_PHATC7.070e-16746.20Type II DNA topoisomerase 6 subunit n=1 Tax=Phaeod... [more]
A0A7S2S2M8_9STRA4.500e-16645.94Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1E7FFR2_9STRA1.580e-16545.37Topo-VIb_trans-domain-containing protein n=1 Tax=F... [more]
A0A1Z5KK08_FISSO6.870e-16145.17Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B8BZH3_THAPS6.860e-15949.12Topoisomerase n=1 Tax=Thalassiosira pseudonana Tax... [more]
A0A7S3LRB3_9STRA5.430e-15741.89Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015320DNA topoisomerase VI, subunit B, transducerPFAMPF09239Topo-VIb_transcoord: 402..507
e-value: 6.4E-34
score: 117.1
NoneNo IPR availableGENE3D1.10.8.50coord: 305..383
e-value: 1.8E-6
score: 30.2
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 1..391
coord: 405..571
NoneNo IPR availablePRODOMPD013790coord: 402..519
e-value: 4.0E-42
score: 436.0
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 393..559
e-value: 3.3E-45
score: 156.1
IPR005734DNA topoisomerase VI, subunit BPANTHERPTHR10871:SF4DNA TOPOISOMERASE 6 SUBUNIT Bcoord: 1..391
coord: 405..571
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 133..274
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 401..509

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015320DNA topoisomerase VI, subunit B, transducerPFAMPF09239Topo-VIb_transcoord: 402..507
e-value: 6.4E-34
score: 117.1
NoneNo IPR availableGENE3D1.10.8.50coord: 305..383
e-value: 1.8E-6
score: 30.2
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 1..391
coord: 405..571
NoneNo IPR availablePRODOMPD013790coord: 402..519
e-value: 4.0E-42
score: 436.0
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 393..559
e-value: 3.3E-45
score: 156.1
IPR005734DNA topoisomerase VI, subunit BPANTHERPTHR10871:SF4DNA TOPOISOMERASE 6 SUBUNIT Bcoord: 1..391
coord: 405..571
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 133..274
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 401..509

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig1047contigF-distichus_contig1047:2798..10311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig1047.416.1mRNA_F-distichus_contig1047.416.1Fucus distichus monoicousmRNAF-distichus_contig1047 2798..10311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig1047.416.1 ID=prot_F-distichus_contig1047.416.1|Name=mRNA_F-distichus_contig1047.416.1|organism=Fucus distichus monoicous|type=polypeptide|length=613bp
GKSLYTTIREFVENSLDAAESIGVLPEVSLTVEEFTEAEFNEHRGMDNRD
IVDAGLFTKASGGKKTPAKSSKAKSKACLKPEVEGATGQGNLAADPSKQD
GSLTHPSDASATNPDWNGIQSDKKGKGKGETLYYRVKCKDNGVGMPHAKI
PDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVLSGCSTD
QEQAPDFLSKCVLDIDIYKNQPSVHEHIKLPNPEGWRGTEMTVCVSGNWQ
TYKARVLQYLQQLAIITPYAQLELEYHCHANPKKDLTAVYRRRSDQMPPL
AYEVKHHPGSVNNLLVQQLIHRRECKDLVGFLSKELSSIDRPLAERIIAE
LGAGFEPKMNPADLTVKMVSRLTQMLKDVKRFKPPDGGCLTEVKHFDLET
KVKEGINVYRFANRIPLLFEAGSDVVTRVATKRVNWSLYKIDHKRDKIGV
FVSTVSTKVPFKGTSKEYIGDDTEEIRRAVKHALQQCCQQLRGHLMRRNA
LRDQRERKKVLTKYIPDVSRAVFGLLTAMQERAQANGKGSGASKSKRARE
PESAAWRVMAALSNNDLTEKTLAAGLGAAVNQHDAEAVKEEISTVGRGNY
SRQVRAREGSIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015320TopoVI_B_transducer
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR005734TopoVI_B
IPR036890HATPase_C_sf
IPR020568Ribosomal_S5_D2-typ_fold