prot_F-distichus_contig10432.387.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig10432.387.1
Unique Name	prot_F-distichus_contig10432.387.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	344

Homology

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BLAST of mRNA_F-distichus_contig10432.387.1 vs. uniprot
Match: D7G0H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H5_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 1.120e-58
Identity = 153/298 (51.34%), Postives = 174/298 (58.39%), Query Frame = 0

Query:   67 AKQKHSVARVRVRVRSSVYVLVAYLNERGSLLLDEVVEAEKHRHGARAARVVGLMNESTGNPVDLNVPARRSLSSGDALVAVVA-----------------TMTSGGRGEVGFVASAESWSGKAPGRVGREDRPEVISRGHAQPVRDTSTRQRPKTSGDTPNPSRILAEDTERGGGRSPQQSDIDQLRDDVARRFFTERQAAGEGIGALRSPFRPHGSPPTTPVTSKRRGASPENSRVTSPRTASPRGVLKGPGRSTEGGGERKGE---SRPASPARSTRSAASGYTHFSCFSLRSHG 344
            A Q   VARVRV VRSSVY++VA + + GS+LLD+V EAEK RHG  AA V GL NESTG+ VDL+VPA RS+SSGD+L A+V                   + +GG GE G   SA    G+AP R                   D S R R    G  P+P R+   D E  GG      DIDQLRDDVARR + ER  AG G  A  SP RP GSP  TPVT   RGASPE+SR TSPR+ASPRG  KGPGRS+  G  R G    SRP SP RS  SAASGYTH S FS+RS G
Sbjct: 1449 ASQGPEVARVRVSVRSSVYLIVAEVEKAGSMLLDQVSEAEKLRHGQNAATVTGLTNESTGDTVDLDVPAERSISSGDSLTAIVVGWSPTTSPPGARTKQSRRLGAGGEGESGGATSAR---GRAPQRQHHRH--------------DGSPRSR---EGSRPSPLRLEFNDNEGRGG------DIDQLRDDVARRLYKERLLAGRGAAAASSPTRPIGSPAITPVTGGGRGASPEHSRPTSPRSASPRGATKGPGRSSPRGSVRDGGGGGSRPGSPTRSVCSAASGYTHCSGFSVRSRG 1720

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BLAST of mRNA_F-distichus_contig10432.387.1 vs. uniprot
Match: A0A6H5L6G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6G9_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 9.640e-54
Identity = 146/297 (49.16%), Postives = 171/297 (57.58%), Query Frame = 0

Query:   67 AKQKHSVARVRVRVRSSVYVLVAYLNERGSLLLDEVVEAEKHRHGARAARVVGLMNESTGNPVDLNVPARRSLSSGDALVAVVATMT----------------SGGRGEVGFVASAESWSGKAPGRVGREDRPEVISRGHAQPVRDTSTRQRPKTSGDTPNPSRILAEDTERGGGRSPQQSDIDQLRDDVARRFFTERQAAGEGIGALRSPFRPHGSPPTTPVTSKRRGASPENSRVTSPRTASPRGVLKGPGRSTEGGGERKGE---SRPASPARSTRSAASGYTHFSCFSLRSHG 344
            A Q   VARVRV VRSSVY++VA + + GS+LLD+V EAEK RHG  AA V GLMNESTG+ VDL +PA RS+SSGD+L+A+VA  +                +GG GE G   SA    G+ P R               Q  R   +R R    G  P+  R+   D E  GG      DID+LRDDVARR + ER  AG G  A  SP RP GSP  TP+T   RGASPE+SR TSPR+A   G    PGRS+  G  R G    SRP SPARS  SAASGYTH S FS+RS G
Sbjct: 1488 APQGPEVARVRVSVRSSVYLIVAEVEKDGSILLDQVSEAEKLRHGQNAATVTGLMNESTGDTVDLELPAERSISSGDSLIAIVAGWSPTTSPGARIKQSRRRGAGGEGESGGATSAR---GRTPQR---------------QHHRHDGSRSR---EGSRPSLLRLELNDNEGRGG------DIDELRDDVARRLYKERLVAGRGAAAASSPTRPIGSPAITPITGGGRGASPEHSRPTSPRSAXXXGATNRPGRSSPRGSVRDGGGRGSRPGSPARSVCSAASGYTHCSGFSVRSRG 1757

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig10432.387.1 vs. uniprot

BLAST of mRNA_F-distichus_contig10432.387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G0H5_ECTSI	1.120e-58	51.34	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L6G9_9PHAE	9.640e-54	49.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..30
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..344
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..12
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..30
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..344
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..12
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig10432	contig	F-distichus_contig10432:36..2179 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig10432.387.1	mRNA_F-distichus_contig10432.387.1	Fucus distichus monoicous	mRNA	F-distichus_contig10432 36..2197 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig10432.387.1 ID=prot_F-distichus_contig10432.387.1|Name=mRNA_F-distichus_contig10432.387.1|organism=Fucus distichus monoicous|type=polypeptide|length=344bp
MAAVGSASAAATATATAAAAAAAAAAAATASITAASEGYRKGFPKGRAVA
NATEAPARSSPLTSAYAKQKHSVARVRVRVRSSVYVLVAYLNERGSLLLD
EVVEAEKHRHGARAARVVGLMNESTGNPVDLNVPARRSLSSGDALVAVVA
TMTSGGRGEVGFVASAESWSGKAPGRVGREDRPEVISRGHAQPVRDTSTR
QRPKTSGDTPNPSRILAEDTERGGGRSPQQSDIDQLRDDVARRFFTERQA
AGEGIGALRSPFRPHGSPPTTPVTSKRRGASPENSRVTSPRTASPRGVLK
GPGRSTEGGGERKGESRPASPARSTRSAASGYTHFSCFSLRSHG