prot_F-distichus_contig104.354.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig104.354.1
Unique Nameprot_F-distichus_contig104.354.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length189
Homology
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BLAST of mRNA_F-distichus_contig104.354.1 vs. uniprot
Match: A0A6H5K8B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8B2_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.150e-44
Identity = 78/120 (65.00%), Postives = 92/120 (76.67%), Query Frame = 0 
Query:   70 AATTAVGPRVSPSSRRDILRWIDRLGLKVDWSVLTPEDAPCHESLSNGLLFCELAAAIDYVASGGRGLPLSEMPSCPGRFVLRGTCSTPPNAARSRHNVRTALSAFDSLGGVSGVWLHDE 189
            A  T  G R   + RRDILRW+DRLG+KVDWS+L  E   CH   S+G + CELAAA+DY ASGGRGLPLSE+PSCPGRFVL+GTC  P NAAR++HNVR+ALSAF +LGG+ G WL  E
Sbjct:  427 AGITEAGKR--RAGRRDILRWMDRLGVKVDWSLLAGEGPRCHHRFSSGEVLCELAAAVDYAASGGRGLPLSEIPSCPGRFVLKGTCGAPANAARAKHNVRSALSAFAALGGIGGTWLRGE 544
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig104.354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8B2_9PHAE1.150e-4465.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig104contigF-distichus_contig104:12362..14306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig104.354.1mRNA_F-distichus_contig104.354.1Fucus distichus monoicousmRNAF-distichus_contig104 12360..14306 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig104.354.1 ID=prot_F-distichus_contig104.354.1|Name=mRNA_F-distichus_contig104.354.1|organism=Fucus distichus monoicous|type=polypeptide|length=189bp
TKEKVVDKNVGFCRHRERAAAGETLGAVRGSSVTAARSTGTSGTAILVPR
EASRNRGCWKPVPSDGVVGAATTAVGPRVSPSSRRDILRWIDRLGLKVDW
SVLTPEDAPCHESLSNGLLFCELAAAIDYVASGGRGLPLSEMPSCPGRFV
LRGTCSTPPNAARSRHNVRTALSAFDSLGGVSGVWLHDE
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