prot_F-distichus_contig103887.346.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig103887.346.1
Unique Name	prot_F-distichus_contig103887.346.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	86

Homology

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: D8LRZ5_ECTSI (DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ5_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 8.810e-40
Identity = 73/78 (93.59%), Postives = 75/78 (96.15%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QAILPLRGKILNIEKCA E+IYQN ELQALISALGLGIKGNEFDA SLRYHRIV+MTDADVDGSHIRILLLTFFFRYQ
Sbjct:  492 QAILPLRGKILNIEKCASERIYQNNELQALISALGLGIKGNEFDASSLRYHRIVVMTDADVDGSHIRILLLTFFFRYQ 569

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: A0A4D9D639_9STRA (DNA gyrase subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D639_9STRA)

HSP 1 Score: 140 bits (353), Expect = 6.210e-37
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QAILPLRGKILNIEK A EKIYQNTELQALISALGLGIKGNEFD  +LRYHRI+IMTDADVDG+HIRILLLTF FRYQ
Sbjct:  543 QAILPLRGKILNIEKAATEKIYQNTELQALISALGLGIKGNEFDPATLRYHRIMIMTDADVDGAHIRILLLTFLFRYQ 620

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: A0A7S3M3P7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3P7_9STRA)

HSP 1 Score: 131 bits (330), Expect = 7.290e-37
Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QAILPL+GKILNIEK + +KIYQNTELQALISALGLG+KG  FD   LRYHRIVIMTDADVDG+HIR+LLLTFF+RYQ
Sbjct:   40 QAILPLKGKILNIEKASSDKIYQNTELQALISALGLGVKGAAFDPEQLRYHRIVIMTDADVDGAHIRLLLLTFFYRYQ 117

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: A0A7S1BUN0_9STRA (DNA topoisomerase 2 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUN0_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.300e-36
Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QAILPLRGKILNIE+ APE+IYQN ELQ LISALGLGIKG+EFD  SLRYHRI+IMTDADVDG+HIR+LLLTFF+RYQ
Sbjct:  358 QAILPLRGKILNIERAAPERIYQNNELQNLISALGLGIKGSEFDLSSLRYHRIIIMTDADVDGAHIRVLLLTFFYRYQ 435

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: A0A835Z3N6_9STRA (DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N6_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.500e-36
Identity = 69/78 (88.46%), Postives = 72/78 (92.31%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QAILPLRGKILNIEKCA EKIYQN ELQALISALGLG+KG +F+   LRYHRIVIMTDADVDGSHIRILLLTFFFRYQ
Sbjct:  483 QAILPLRGKILNIEKCANEKIYQNNELQALISALGLGVKGVDFELEKLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 560

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: A0A7S2RLA2_9STRA (DNA gyrase subunit B n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLA2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.070e-35
Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QA+LPLRGKILNIEK APEKIYQN ELQALISALGLG+K  EFD  SLRYH +VIMTDADVDG+HIRILLLTFF+RYQ
Sbjct:  546 QAVLPLRGKILNIEKAAPEKIYQNNELQALISALGLGVKNGEFDLASLRYHSVVIMTDADVDGAHIRILLLTFFYRYQ 623

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: A0A7S2P1J8_9STRA (DNA topoisomerase 2 n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P1J8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.750e-35
Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QAILPLRGKILNIE+ A EKIYQN ELQ+LISALGLGIKG E D  SLRYHRIVIMTDADVDG+HIR+LLLTFF+RYQ
Sbjct:  385 QAILPLRGKILNIERAAAEKIYQNNELQSLISALGLGIKGTELDLSSLRYHRIVIMTDADVDGAHIRVLLLTFFYRYQ 462

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: A0A7S3XY21_HETAK (DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY21_HETAK)

HSP 1 Score: 135 bits (339), Expect = 4.550e-35
Identity = 67/78 (85.90%), Postives = 71/78 (91.03%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QAILPLRGKILNIEK A EKIYQN ELQALISALGLGIKG EF   +LRYH+I+IMTDADVDGSHIRILLLTFF+RYQ
Sbjct:  494 QAILPLRGKILNIEKAASEKIYQNNELQALISALGLGIKGQEFAESNLRYHKIIIMTDADVDGSHIRILLLTFFYRYQ 571

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: UPI001F44659F (toprim domain-containing protein n=1 Tax=Prochlorococcus sp. HOT212_60m_824C06 TaxID=1961096 RepID=UPI001F44659F)

HSP 1 Score: 127 bits (320), Expect = 4.750e-35
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QAILPLRGKILNIEK    KIY+NTE+Q+LI+ALGLGIKG EF+  SLRYHR+VIMTDADVDG+HIR LLLTFF+RYQ
Sbjct:  133 QAILPLRGKILNIEKTDDTKIYKNTEIQSLITALGLGIKGEEFNESSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQ 210

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BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Match: M1VGL3_CYAM1 (DNA gyrase subunit B n=2 Tax=cellular organisms TaxID=131567 RepID=M1VGL3_CYAM1)

HSP 1 Score: 135 bits (339), Expect = 5.580e-35
Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 0

Query:    1 QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRYHRIVIMTDADVDGSHIRILLLTFFFRYQ 78
            QAILPLRGKILNIEKC   K+Y+NTE+QALI+A+GLG+KG EFDA  LRYHRI+IMTDADVDG+HIR LLLTFFFRYQ
Sbjct:  609 QAILPLRGKILNIEKCDDSKVYKNTEIQALITAIGLGVKGEEFDANQLRYHRIIIMTDADVDGAHIRTLLLTFFFRYQ 686

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot

BLAST of mRNA_F-distichus_contig103887.346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRZ5_ECTSI	8.810e-40	93.59	DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A4D9D639_9STRA	6.210e-37	89.74	DNA gyrase subunit B n=2 Tax=Monodopsidaceae TaxID...	[more]
A0A7S3M3P7_9STRA	7.290e-37	82.05	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A7S1BUN0_9STRA	2.300e-36	84.62	DNA topoisomerase 2 n=1 Tax=Corethron hystrix TaxI...	[more]
A0A835Z3N6_9STRA	2.500e-36	88.46	DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID...	[more]
A0A7S2RLA2_9STRA	1.070e-35	84.62	DNA gyrase subunit B n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2P1J8_9STRA	3.750e-35	84.62	DNA topoisomerase 2 n=2 Tax=Leptocylindrus danicus...	[more]
A0A7S3XY21_HETAK	4.550e-35	85.90	DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo ...	[more]
UPI001F44659F	4.750e-35	79.49	toprim domain-containing protein n=1 Tax=Prochloro...	[more]
M1VGL3_CYAM1	5.580e-35	80.77	DNA gyrase subunit B n=2 Tax=cellular organisms Ta...	[more]

Pages

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00418	TPI2FAMILY	coord: 65..82 score: 42.28 coord: 47..63 score: 68.29
None	No IPR available	PANTHER	PTHR45866	FAMILY NOT NAMED	coord: 1..78
None	No IPR available	PANTHER	PTHR45866:SF8		coord: 1..78
IPR013759	DNA topoisomerase, type IIA, subunit B, C-terminal	GENE3D	3.40.50.670		coord: 1..81 e-value: 3.5E-35 score: 123.2
IPR006171	TOPRIM domain	PFAM	PF01751	Toprim	coord: 1..76 e-value: 8.3E-10 score: 38.8
IPR006171	TOPRIM domain	PROSITE	PS50880	TOPRIM	coord: 1..85 score: 12.087
IPR013760	DNA topoisomerase, type IIA-like domain superfamily	SUPERFAMILY	56719	Type II DNA topoisomerase	coord: 1..78

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00418	TPI2FAMILY	coord: 65..82 score: 42.28 coord: 47..63 score: 68.29
None	No IPR available	PANTHER	PTHR45866	FAMILY NOT NAMED	coord: 1..78
None	No IPR available	PANTHER	PTHR45866:SF8		coord: 1..78
IPR013759	DNA topoisomerase, type IIA, subunit B, C-terminal	GENE3D	3.40.50.670		coord: 1..81 e-value: 3.5E-35 score: 123.2
IPR006171	TOPRIM domain	PFAM	PF01751	Toprim	coord: 1..76 e-value: 8.3E-10 score: 38.8
IPR006171	TOPRIM domain	PROSITE	PS50880	TOPRIM	coord: 1..85 score: 12.087
IPR013760	DNA topoisomerase, type IIA-like domain superfamily	SUPERFAMILY	56719	Type II DNA topoisomerase	coord: 1..78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig103887	contig	F-distichus_contig103887:494..2004 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig103887.346.1	mRNA_F-distichus_contig103887.346.1	Fucus distichus monoicous	mRNA	F-distichus_contig103887 494..2004 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig103887.346.1 ID=prot_F-distichus_contig103887.346.1|Name=mRNA_F-distichus_contig103887.346.1|organism=Fucus distichus monoicous|type=polypeptide|length=86bp
QAILPLRGKILNIEKCAPEKIYQNTELQALISALGLGIKGNEFDAGSLRY
HRIVIMTDADVDGSHIRILLLTFFFRYQVLYTTPL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013759	Topo_IIA_B_C
IPR006171	TOPRIM_domain
IPR013760	Topo_IIA-like_dom_sf