prot_F-distichus_contig10371.329.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10371.329.1
Unique Nameprot_F-distichus_contig10371.329.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length1185
Homology
BLAST of mRNA_F-distichus_contig10371.329.1 vs. uniprot
Match: A0A6H5KYL2_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYL2_9PHAE)

HSP 1 Score: 854 bits (2207), Expect = 5.080e-275
Identity = 602/1230 (48.94%), Postives = 717/1230 (58.29%), Query Frame = 0
Query:    1 AAVVRDATVRSRFGDRVFWLHAGKGARNRLISILQALADTVYAWLIEDEHATTRRGFSGGGGXXXXXXXXXXGSGRRGMQALDLEMTPELREPVRFRDEEQALDYVACLCRRPSLAGLRCLVVLDDVHERHVVDAIWRSGCQLLITSPDQGLLQAIGAEATIVHPLGDSDAKQVAAGAAAEEILCEVADKVLNLCHGCPLALAMSGAVAQAMLSAGSDTREWRRPRLGTPRSTMGVGDQKEARCVGRKALSGTALGSAMIGTGRSLGNTFSNITAPVGAWVEQVVVGTT-SLPSRRAVQHGGAPSEEENVAGAKAKARRRTYEPAQQASAPAAVNENSTSATVVAPA-----ASRNSVETTAWVDLAARIESGRNVL-RSNPNLRQALVEAGPECELPTREVLAVLTQVALEEADRILAGSRLGTNCFLSFSLLPEGLPLPPPALEKYWRDEDVRDTGRKVPVVTSGVVDSSAFTDVHHHGAPGPVEVFEALRLLGRAGGGEGADGLIPHGIQRLVAVSVASLHPDRTDRMAQRRARMLSRISSLVGTFEDDCWALGGGXXXEVRIRRAAAAALRGRSHGAVVSSTRERGDRGNDPQEEPEPIPTGLLGSSRPGPPSHGYGGFSRYDYLVASWDALPAQHTMSDAAVRYLASVRASLGSATVDTDTAAGRGSGSSRGVG----------------WAEARALASAADVCALVGQGSEAIPAYRKAGELLAAEAERDAKRPLTGVSSWQQNARSALHKVASMVQDLAVLTAFMGEEAPAIRLLQRAVEIHLSVLEASGALVPSFGGGRS--------GGDIPVSEMGAKEAGGGRERGGVITRRAVAEDDRPLPSRLWLHASPATTAGEPSPSGRSSXXXXXXX-----TLPMVGRLDVVSTCVGDLGVVVKCTRQLCQKKRVEESAQLSEKVYPVLKEILGADHAFTRAALAGFVGQGIVDECWSQSDVAGGGS--GHPNLPSPTSRRRLARIYGGRVPCAIAARMNAMTGGSXXXXXXXXXXDRPGSSVSASTLSELSSPPSPLPE-FHVR-PTSLNSAHDGGSTRTPLTRLTTGGRLGMAHRDRERSSSGFSNNESTSSGTDDSDAGGARSRT--AASRRAGPVGMAA-GRLSFQPRLSE--RPPHGSRTDTAARQGWRRESGGGGMRRGSVEPSSTRMQQELYFRHRTRRAMAHAFLITTATRARLKRVDRAEANLFLVDVARQAGA 1185
            AAVVRDATVR RFGDRVFWLHAGKGA +RL+S+LQ+LADTVYAWL + EHA    G +              G G  G    D    P LREPVRFRD++QA++YVA LCR P LAG RCLVV+DDVHER VVDA+W+SGCQLL+TSP +GLLQA+GAEAT+  PLG   A+Q+A  AA E  LCE   ++++LC GCPLALAMSGA+ QA+ S GSD RE+R P L TPRST+G                  +  S            FS + APVGAWVEQVVVGT+ S P+ R  Q G APS       +K K R     P +     A                          E TAW +LA R+++    L +S   L   L EAGPE ELP R+++AVLT++AL+EADRIL GS     C+LSF+LLPEG PLPPPALE++WR     + G              +F   H+   P PVEVFEALR++ RAGGGEGADGL+ HG+QR V   +A  HP+   + A+RRAR LSRISSLVGTF+D CW                   LRG   G   +S    GD  +  +   + IP+GLLGS RPGPP HGYGGFSRYDYLVASWDALPA ++++ A   Y++SVRA+  +A                                   WA ARALASAAD+ AL GQ S AI  Y +A  LLA EA R A     GVS  ++ AR + HKVASM++++A+L A    EAPAIRLLQRAVE+HLS LEASG LVP F GG          GGD  V+         GR  G  +T RAV +D RPL SRLWL     T     S      XXXXXXX      LP  GRLDVV TCVGDLG+V+ CTR L Q+ +V+ESAQL+EKVYPVLKEILGADHAFT+AALA FVGQGIVD+CW ++DV G GS  GHP+LPSPTSRRRLAR  GGR                XXXXXXXXXX        A+TLS+LS PPSPLPE F+ R  +S+NSA  G      +      G           S+SG S   ++                     RRAGPVG  A G LSF  R+    R  HG R + A   GW +          S    S+RMQ+++YFRHRTRRA AHAFLIT ATRARLK  DR EA LFL D+ RQAGA
Sbjct: 1364 AAVVRDATVRRRFGDRVFWLHAGKGADHRLVSVLQSLADTVYAWLTDGEHA----GVASSSALPRRSVGSGGGGGDAGAALAD----PNLREPVRFRDQDQAVNYVADLCRGPLLAGFRCLVVVDDVHEREVVDALWKSGCQLLVTSPVKGLLQAVGAEATVARPLGMEVARQLATRAAGEVALCEEGGRLVDLCRGCPLALAMSGAITQAVFSGGSDAREYRNPGLATPRSTIGEDTAAGXXXXXXXXXEEPSTWS------------FSTLAAPVGAWVEQVVVGTSGSPPTNRQRQGGDAPS-------SKDKRRPAATGPEEDVRGVACAGXXXXXXXXXXXXXXTVPGHELGPEATAWANLARRVDAALARLGQSRSALCGLLAEAGPEQELPVRQLVAVLTELALQEADRILGGSGWAVECYLSFALLPEGHPLPPPALEEFWRSGQGDEEGXXXXXXXXXXXXXXSFAAAHN--LPSPVEVFEALRMVCRAGGGEGADGLVLHGLQRPVVSCLALRHPEAMQKAARRRARTLSRISSLVGTFDDACWG------------------LRGADTGTGGASG---GDDSSGGEGVADAIPSGLLGSGRPGPPHHGYGGFSRYDYLVASWDALPAPYSLTSAVAGYVSSVRAAYRAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAARALASAADMLALAGQLSRAIAVYEEACGLLAEEAARAAG--AVGVSQKERAARESHHKVASMLREVAMLAAQFEREAPAIRLLQRAVEMHLSALEASGVLVPHFAGGNEHRSKLKADGGDAAVAXXXXXXXAQGR--GADVTYRAVVDDARPLCSRLWLQFPVGTRERAASXXXXXXXXXXXXXXXXXXNLPAFGRLDVVGTCVGDLGLVLACTRVLRQEGKVDESAQLAEKVYPVLKEILGADHAFTKAALAAFVGQGIVDQCWKEADVHGSGSSGGHPSLPSPTSRRRLARSSGGR---------GXXXXXXXXXXXXXXXXXXXXXXXXATTLSDLSLPPSPLPEEFYARYSSSVNSAKSGRGDAPAVGH----GXXXXXXXXXXXSNSGSSXXVTSGXXXXXXXXXXXXXXXPLGVHRRAGPVGGGAYGSLSFPRRVLNGGRQEHGWRMEGA--HGWGQGETAAAASSSSGGLQSSRMQKDIYFRHRTRRARAHAFLITAATRARLKNADRDEAGLFLRDLGRQAGA 2524          
BLAST of mRNA_F-distichus_contig10371.329.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.710e-5
Identity = 59/218 (27.06%), Postives = 93/218 (42.66%), Query Frame = 0
Query:    1 AAVVRDATVRSRFGDRVFWLHAGKGARNRLISILQALADTVYAWLIEDEHATTRRGFSGGGGXXXXXXXXXXGSGRRGMQALDLEMTPELREPVRFRDEEQALDYVACLCRRPSLAGLRCLVVLDDVHERHVVDAIWRSGCQLLITSPDQGLLQAIGAEATIVHPLGDSDAKQV---------AAGAAAEEILCEVADKVLNLCHGCPLALAMSGAVA 209
            +AVVR + VR  F   VFW+  G+ A+N L+S+LQ LA  + A   +  H                                     P + E +     EQ   ++A +    S      LVVLDDV ER VVDA+   G ++L+T+ D+ ++   G     +  LGD   ++            G    E+  ++  KV+ LC   PL LA++G+++
Sbjct:   53 SAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGV-----------------------------------PHVLESL-----EQVKQHLATVA---SAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGG----LLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMT-KVVVLCGHLPLVLAIAGSMS 222          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10371.329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYL2_9PHAE5.080e-27548.94NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5LJA6_9PHAE1.710e-527.06NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 112..208

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 112..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10371contigF-distichus_contig10371:2..4347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10371.329.1mRNA_F-distichus_contig10371.329.1Fucus distichus monoicousmRNAF-distichus_contig10371 2..4347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10371.329.1 ID=prot_F-distichus_contig10371.329.1|Name=mRNA_F-distichus_contig10371.329.1|organism=Fucus distichus monoicous|type=polypeptide|length=1185bp
AAVVRDATVRSRFGDRVFWLHAGKGARNRLISILQALADTVYAWLIEDEH
ATTRRGFSGGGGCGGGGSMGSSGSGRRGMQALDLEMTPELREPVRFRDEE
QALDYVACLCRRPSLAGLRCLVVLDDVHERHVVDAIWRSGCQLLITSPDQ
GLLQAIGAEATIVHPLGDSDAKQVAAGAAAEEILCEVADKVLNLCHGCPL
ALAMSGAVAQAMLSAGSDTREWRRPRLGTPRSTMGVGDQKEARCVGRKAL
SGTALGSAMIGTGRSLGNTFSNITAPVGAWVEQVVVGTTSLPSRRAVQHG
GAPSEEENVAGAKAKARRRTYEPAQQASAPAAVNENSTSATVVAPAASRN
SVETTAWVDLAARIESGRNVLRSNPNLRQALVEAGPECELPTREVLAVLT
QVALEEADRILAGSRLGTNCFLSFSLLPEGLPLPPPALEKYWRDEDVRDT
GRKVPVVTSGVVDSSAFTDVHHHGAPGPVEVFEALRLLGRAGGGEGADGL
IPHGIQRLVAVSVASLHPDRTDRMAQRRARMLSRISSLVGTFEDDCWALG
GGGGEEVRIRRAAAAALRGRSHGAVVSSTRERGDRGNDPQEEPEPIPTGL
LGSSRPGPPSHGYGGFSRYDYLVASWDALPAQHTMSDAAVRYLASVRASL
GSATVDTDTAAGRGSGSSRGVGWAEARALASAADVCALVGQGSEAIPAYR
KAGELLAAEAERDAKRPLTGVSSWQQNARSALHKVASMVQDLAVLTAFMG
EEAPAIRLLQRAVEIHLSVLEASGALVPSFGGGRSGGDIPVSEMGAKEAG
GGRERGGVITRRAVAEDDRPLPSRLWLHASPATTAGEPSPSGRSSGGGGG
GGTLPMVGRLDVVSTCVGDLGVVVKCTRQLCQKKRVEESAQLSEKVYPVL
KEILGADHAFTRAALAGFVGQGIVDECWSQSDVAGGGSGHPNLPSPTSRR
RLARIYGGRVPCAIAARMNAMTGGSGGYGGGGGSSDRPGSSVSASTLSEL
SSPPSPLPEFHVRPTSLNSAHDGGSTRTPLTRLTTGGRLGMAHRDRERSS
SGFSNNESTSSGTDDSDAGGARSRTAASRRAGPVGMAAGRLSFQPRLSER
PPHGSRTDTAARQGWRRESGGGGMRRGSVEPSSTRMQQELYFRHRTRRAM
AHAFLITTATRARLKRVDRAEANLFLVDVARQAGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase