prot_F-distichus_contig102736.241.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig102736.241.1
Unique Name	prot_F-distichus_contig102736.241.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	112

Homology

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BLAST of mRNA_F-distichus_contig102736.241.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 5.470e-39
Identity = 67/112 (59.82%), Postives = 88/112 (78.57%), Query Frame = 0

Query:    1 STQQAALLRNPDPGRLMMLLFVKTFIIGHLLPFSLSDSPDVRLFFECVAHTSFPRSKLYPKMVKHYLVEVYKATVSSFSHRLQSAFAGAGGPALHASFDLWTSQTSNEKYIG 112
            S  + A++++ DPGR+M+L++VK FII HLL FSLSDS DVR FFE     +FP+S LYP+M+KH++VE+Y ATVS FS+ ++ A  GAGG  LHA+FDLWTS+ SNEKYIG
Sbjct:  153 SKHKEAVMKSSDPGRVMLLMYVKVFIISHLLAFSLSDSQDVRAFFEVCCEDTFPKSTLYPQMIKHFVVELYDATVSKFSYSIRKAITGAGGAVLHANFDLWTSKWSNEKYIG 264

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig102736.241.1 vs. uniprot

BLAST of mRNA_F-distichus_contig102736.241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KVU5_9PHAE	5.470e-39	59.82	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..15
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 16..35
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 36..112

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..15
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 16..35
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 36..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig102736	contig	F-distichus_contig102736:1631..1966 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig102736.241.1	mRNA_F-distichus_contig102736.241.1	Fucus distichus monoicous	mRNA	F-distichus_contig102736 1631..1966 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig102736.241.1 ID=prot_F-distichus_contig102736.241.1|Name=mRNA_F-distichus_contig102736.241.1|organism=Fucus distichus monoicous|type=polypeptide|length=112bp
STQQAALLRNPDPGRLMMLLFVKTFIIGHLLPFSLSDSPDVRLFFECVAH
TSFPRSKLYPKMVKHYLVEVYKATVSSFSHRLQSAFAGAGGPALHASFDL
WTSQTSNEKYIG