prot_F-distichus_contig102674.234.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig102674.234.1
Unique Nameprot_F-distichus_contig102674.234.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length56
Homology
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BLAST of mRNA_F-distichus_contig102674.234.1 vs. uniprot
Match: D7G867_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G867_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.640e-15
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 0 
Query:    1 RNKVLKSPEVRDALCVVRAWQSSDYATFFRALREQRLMHRCLLSQYVGSMRHTAIK 56
            R +VL SPE+R AL VVRAW + DY TFFRA R+Q +MHRCL+SQYV  MR +AIK
Sbjct:  512 REEVLDSPEIRGALKVVRAWHAGDYVTFFRAFRQQGVMHRCLMSQYVKPMRDSAIK 567
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig102674.234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G867_ECTSI1.640e-1566.07PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.990coord: 1..56
e-value: 2.8E-5
score: 25.8
IPR005062SAC3/GANP/THP3PFAMPF03399SAC3_GANPcoord: 2..56
e-value: 3.1E-9
score: 36.7

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.990coord: 1..56
e-value: 2.8E-5
score: 25.8
IPR005062SAC3/GANP/THP3PFAMPF03399SAC3_GANPcoord: 2..56
e-value: 3.1E-9
score: 36.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig102674contigF-distichus_contig102674:897..1064 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig102674.234.1mRNA_F-distichus_contig102674.234.1Fucus distichus monoicousmRNAF-distichus_contig102674 897..1064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig102674.234.1 ID=prot_F-distichus_contig102674.234.1|Name=mRNA_F-distichus_contig102674.234.1|organism=Fucus distichus monoicous|type=polypeptide|length=56bp
RNKVLKSPEVRDALCVVRAWQSSDYATFFRALREQRLMHRCLLSQYVGSM
RHTAIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005062SAC3/GANP/THP3